RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SPAG11BQ08648 103 aa10.46□□□□□ -0.73
TOP3A-202ENST00000461127 SYCNQ0VAF6 134 aa10.46□□□□□ -0.73
TOP3A-202ENST00000461127 GAGE2BQ13066 116 aa10.46□□□□□ -0.73
TOP3A-202ENST00000461127 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
TOP3A-202ENST00000461127 J3QQQ9 107 aa10.45□□□□□ -0.74
TOP3A-202ENST00000461127 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
TOP3A-202ENST00000461127 C12orf57Q99622 126 aa10.45□□□□□ -0.74
TOP3A-202ENST00000461127 IGLV1-50A0A075B6I6 118 aa10.44□□□□□ -0.74
TOP3A-202ENST00000461127 IGKV2D-26A0A0A0MRZ7 120 aa10.44□□□□□ -0.74
TOP3A-202ENST00000461127 Q8IZM0 81 aa10.44□□□□□ -0.74
TOP3A-202ENST00000461127 A0A1W2PNN7 141 aa10.43□□□□□ -0.74
TOP3A-202ENST00000461127 CKS1BP61024 79 aa10.43□□□□□ -0.74
TOP3A-202ENST00000461127 TSPEAR-AS2P59090 65 aa10.42□□□□□ -0.74
TOP3A-202ENST00000461127 CXCL5P42830 114 aa10.41□□□□□ -0.74
TOP3A-202ENST00000461127 LINC00518Q8N0U6 118 aa10.41□□□□□ -0.74
TOP3A-202ENST00000461127 NDUFA12Q9UI09 145 aa10.41□□□□□ -0.74
TOP3A-202ENST00000461127 H0Y9J4 135 aa10.4□□□□□ -0.74
TOP3A-202ENST00000461127 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
TOP3A-202ENST00000461127 KIAA0087Q14695 138 aa10.4□□□□□ -0.74
TOP3A-202ENST00000461127 C9orf116Q5BN46 136 aaPredicted RBP10.4□□□□□ -0.74
TOP3A-202ENST00000461127 SFTA2Q6UW10 78 aa10.4□□□□□ -0.74
TOP3A-202ENST00000461127 CAMK2N2Q96S95 79 aa10.4□□□□□ -0.74
TOP3A-202ENST00000461127 MYMXA0A1B0GTQ4 84 aa10.39□□□□□ -0.75
TOP3A-202ENST00000461127 ZNF815PA8K554 130 aa10.39□□□□□ -0.75
TOP3A-202ENST00000461127 PCP2Q8IVA1 136 aa10.39□□□□□ -0.75
TOP3A-202ENST00000461127 C14orf144Q96I85 54 aa10.39□□□□□ -0.75
TOP3A-202ENST00000461127 C2orf48Q96LS8 159 aa10.39□□□□□ -0.75
TOP3A-202ENST00000461127 F8WDY8 70 aa10.38□□□□□ -0.75
TOP3A-202ENST00000461127 NDUFA1O15239 70 aa10.38□□□□□ -0.75
TOP3A-202ENST00000461127 RPL13AP40429 203 aaKnown RBP10.38□□□□□ -0.75
TOP3A-202ENST00000461127 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
TOP3A-202ENST00000461127 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
TOP3A-202ENST00000461127 COX8AP10176 69 aa10.37□□□□□ -0.75
TOP3A-202ENST00000461127 PHF5AQ7RTV0 110 aaKnown RBP10.37□□□□□ -0.75
TOP3A-202ENST00000461127 HERV-K104P63124 156 aa10.36□□□□□ -0.75
TOP3A-202ENST00000461127 RPL18AQ02543 176 aaKnown RBP10.36□□□□□ -0.75
TOP3A-202ENST00000461127 SLC25A34Q6PIV7 304 aa10.36□□□□□ -0.75
TOP3A-202ENST00000461127 ZNF625Q96I27 306 aaPredicted RBP10.36□□□□□ -0.75
TOP3A-202ENST00000461127 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
TOP3A-202ENST00000461127 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
TOP3A-202ENST00000461127 PRO1933Q9H354 126 aa10.35□□□□□ -0.75
TOP3A-202ENST00000461127 MEIG1Q5JSS6 88 aa10.34□□□□□ -0.75
TOP3A-202ENST00000461127 BOD1L2Q8IYS8 172 aa10.34□□□□□ -0.75
TOP3A-202ENST00000461127 DLEU1O43261 78 aa10.33□□□□□ -0.76
TOP3A-202ENST00000461127 C10orf25Q5T742 122 aa10.33□□□□□ -0.76
TOP3A-202ENST00000461127 UQCR10Q9UDW1 63 aa10.33□□□□□ -0.76
TOP3A-202ENST00000461127 A0A0J9YXY3 114 aa10.32□□□□□ -0.76
TOP3A-202ENST00000461127 TRBV30A0A0K0K1B3 111 aa10.32□□□□□ -0.76
TOP3A-202ENST00000461127 TSTD3H0UI37 97 aa10.32□□□□□ -0.76
TOP3A-202ENST00000461127 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
TOP3A-202ENST00000461127 LINC00587B1AMM8 73 aa10.31□□□□□ -0.76
TOP3A-202ENST00000461127 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
TOP3A-202ENST00000461127 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
TOP3A-202ENST00000461127 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
TOP3A-202ENST00000461127 PFN2P35080 140 aa10.29□□□□□ -0.76
TOP3A-202ENST00000461127 LINC00158P58513 81 aa10.29□□□□□ -0.76
TOP3A-202ENST00000461127 RNF151Q2KHN1 245 aa10.29□□□□□ -0.76
TOP3A-202ENST00000461127 A0A0U1RRA0 63 aa10.28□□□□□ -0.76
TOP3A-202ENST00000461127 SMIM13P0DJ93 91 aa10.28□□□□□ -0.76
TOP3A-202ENST00000461127 MIEN1Q9BRT3 115 aa10.28□□□□□ -0.76
TOP3A-202ENST00000461127 TMEM238C9JI98 176 aa10.27□□□□□ -0.77
TOP3A-202ENST00000461127 TIMM17BO60830 172 aa10.27□□□□□ -0.77
TOP3A-202ENST00000461127 TSPAN13O95857 204 aa10.27□□□□□ -0.77
TOP3A-202ENST00000461127 COX17Q14061 63 aa10.27□□□□□ -0.77
TOP3A-202ENST00000461127 HIGD1BQ9P298 99 aa10.25□□□□□ -0.77
TOP3A-202ENST00000461127 NDUFC2-KCTD14E9PQ53 114 aa10.24□□□□□ -0.77
TOP3A-202ENST00000461127 C2orf91Q6ZV80 131 aa10.24□□□□□ -0.77
TOP3A-202ENST00000461127 KRTAP11-1Q8IUC1 163 aa10.23□□□□□ -0.77
TOP3A-202ENST00000461127 MIR7-3HGQ8N6C7 128 aa10.23□□□□□ -0.77
TOP3A-202ENST00000461127 UBE2BP63146 152 aa10.22□□□□□ -0.77
TOP3A-202ENST00000461127 ADAMTSL4-AS1Q5T5F5 129 aa10.22□□□□□ -0.77
TOP3A-202ENST00000461127 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
TOP3A-202ENST00000461127 DAND5Q8N907 189 aa10.22□□□□□ -0.77
TOP3A-202ENST00000461127 HIST1H4GQ99525 98 aa10.22□□□□□ -0.77
TOP3A-202ENST00000461127 LITAFQ99732 161 aa10.22□□□□□ -0.77
TOP3A-202ENST00000461127 SPANXB1Q9NS25 103 aaPredicted RBP10.22□□□□□ -0.77
TOP3A-202ENST00000461127 FAM168BA1KXE4 195 aa10.21□□□□□ -0.77
TOP3A-202ENST00000461127 TLX1NBP0CAT3 122 aa10.21□□□□□ -0.77
TOP3A-202ENST00000461127 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
TOP3A-202ENST00000461127 Q6ZVH6 145 aa10.21□□□□□ -0.77
TOP3A-202ENST00000461127 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.77
TOP3A-202ENST00000461127 SPANXCQ9NY87 97 aa10.21□□□□□ -0.77
TOP3A-202ENST00000461127 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
TOP3A-202ENST00000461127 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
TOP3A-202ENST00000461127 NPC2P61916 151 aa10.19□□□□□ -0.78
TOP3A-202ENST00000461127 DDTP30046 118 aa10.18□□□□□ -0.78
TOP3A-202ENST00000461127 SND1-IT1Q9HBX3 110 aa10.18□□□□□ -0.78
TOP3A-202ENST00000461127 M0QXV9 152 aa10.17□□□□□ -0.78
TOP3A-202ENST00000461127 IFITM1P13164 125 aa10.17□□□□□ -0.78
TOP3A-202ENST00000461127 HSD52Q0P140 79 aa10.17□□□□□ -0.78
TOP3A-202ENST00000461127 TAL2Q16559 108 aa10.17□□□□□ -0.78
TOP3A-202ENST00000461127 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
TOP3A-202ENST00000461127 CDIP1Q9H305 208 aa10.17□□□□□ -0.78
TOP3A-202ENST00000461127 XAGE1AQ9HD64 81 aa10.17□□□□□ -0.78
TOP3A-202ENST00000461127 PCP4L1A6NKN8 68 aa10.16□□□□□ -0.78
TOP3A-202ENST00000461127 CTAG1AP78358 180 aa10.16□□□□□ -0.78
TOP3A-202ENST00000461127 MUSTN1Q8IVN3 82 aa10.15□□□□□ -0.78
TOP3A-202ENST00000461127 CRCT1Q9UGL9 99 aa10.15□□□□□ -0.78
TOP3A-202ENST00000461127 ZNF861PO60384 105 aa10.14□□□□□ -0.79
TOP3A-202ENST00000461127 LCE2DQ5TA82 110 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms