RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
SYPL1-202ENST00000455385 APOBP04114 4563 aaKnown RBP6.78□□□□□ -1.32
SYPL1-202ENST00000455385 SCXQ7RTU7 201 aa6.78□□□□□ -1.32
SYPL1-202ENST00000455385 C12orf57Q99622 126 aa6.78□□□□□ -1.32
SYPL1-202ENST00000455385 NPC2P61916 151 aa6.78□□□□□ -1.32
SYPL1-202ENST00000455385 SERTAD4-AS1Q5TG53 156 aa6.78□□□□□ -1.32
SYPL1-202ENST00000455385 EPM2AB3EWF7 344 aa6.77□□□□□ -1.33
SYPL1-202ENST00000455385 C2orf91Q6ZV80 131 aa6.77□□□□□ -1.33
SYPL1-202ENST00000455385 LINC00518Q8N0U6 118 aa6.77□□□□□ -1.33
SYPL1-202ENST00000455385 PRO1933Q9H354 126 aa6.77□□□□□ -1.33
SYPL1-202ENST00000455385 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.33
SYPL1-202ENST00000455385 LOC107984156A0A0G2JMH3 177 aa6.76□□□□□ -1.33
SYPL1-202ENST00000455385 ARL17AQ8IVW1 177 aa6.76□□□□□ -1.33
SYPL1-202ENST00000455385 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
SYPL1-202ENST00000455385 LINC00308Q8TCZ7 52 aa6.76□□□□□ -1.33
SYPL1-202ENST00000455385 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
SYPL1-202ENST00000455385 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
SYPL1-202ENST00000455385 PRR3P79522 188 aaKnown RBP6.75□□□□□ -1.33
SYPL1-202ENST00000455385 FAM19A5Q7Z5A7 132 aaPredicted RBP6.75□□□□□ -1.33
SYPL1-202ENST00000455385 VPREB1P12018 145 aa6.75□□□□□ -1.33
SYPL1-202ENST00000455385 SPANXB1Q9NS25 103 aaPredicted RBP6.75□□□□□ -1.33
SYPL1-202ENST00000455385 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
SYPL1-202ENST00000455385 MUSTN1Q8IVN3 82 aa6.74□□□□□ -1.33
SYPL1-202ENST00000455385 HIGD1BQ9P298 99 aa6.74□□□□□ -1.33
SYPL1-202ENST00000455385 UQCR10Q9UDW1 63 aa6.74□□□□□ -1.33
SYPL1-202ENST00000455385 KIAA1109Q2LD37 5005 aa6.74□□□□□ -1.33
SYPL1-202ENST00000455385 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
SYPL1-202ENST00000455385 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
SYPL1-202ENST00000455385 BIRC6Q9NR09 4857 aa6.73□□□□□ -1.33
SYPL1-202ENST00000455385 CDK2AP2O75956 126 aa6.73□□□□□ -1.33
SYPL1-202ENST00000455385 Q6ZVH6 145 aa6.73□□□□□ -1.33
SYPL1-202ENST00000455385 PHF5AQ7RTV0 110 aaKnown RBP6.73□□□□□ -1.33
SYPL1-202ENST00000455385 MIEN1Q9BRT3 115 aa6.72□□□□□ -1.33
SYPL1-202ENST00000455385 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
SYPL1-202ENST00000455385 IFITM1P13164 125 aa6.72□□□□□ -1.33
SYPL1-202ENST00000455385 RYR1P21817 5038 aa6.72□□□□□ -1.33
SYPL1-202ENST00000455385 M0QXV9 152 aa6.71□□□□□ -1.33
SYPL1-202ENST00000455385 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.33
SYPL1-202ENST00000455385 RPL24P83731 157 aaKnown RBP6.71□□□□□ -1.33
SYPL1-202ENST00000455385 KRTAP11-1Q8IUC1 163 aa6.71□□□□□ -1.33
SYPL1-202ENST00000455385 HIST1H4GQ99525 98 aa6.71□□□□□ -1.33
SYPL1-202ENST00000455385 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
SYPL1-202ENST00000455385 HSPG2P98160 4391 aa6.7□□□□□ -1.34
SYPL1-202ENST00000455385 IGKV2-28A0A075B6P5 120 aa6.7□□□□□ -1.34
SYPL1-202ENST00000455385 GAGE10A6NGK3 116 aa6.7□□□□□ -1.34
SYPL1-202ENST00000455385 NCR3O14931 201 aa6.7□□□□□ -1.34
SYPL1-202ENST00000455385 IGKV2D-28P01615 120 aa6.7□□□□□ -1.34
SYPL1-202ENST00000455385 MRPL55Q7Z7F7 128 aaKnown RBP6.7□□□□□ -1.34
SYPL1-202ENST00000455385 C7orf33Q8WU49 177 aa6.7□□□□□ -1.34
SYPL1-202ENST00000455385 LINC00167Q96N53 147 aa6.7□□□□□ -1.34
SYPL1-202ENST00000455385 NDUFC2O95298 119 aa6.69□□□□□ -1.34
SYPL1-202ENST00000455385 NKAPP1Q8N9T2 125 aa6.69□□□□□ -1.34
SYPL1-202ENST00000455385 PPDPFQ9H3Y8 114 aa6.69□□□□□ -1.34
SYPL1-202ENST00000455385 RPL37AP8A6NKH3 93 aa6.68□□□□□ -1.34
SYPL1-202ENST00000455385 HNRNPA3P51991 378 aaKnown RBP6.68□□□□□ -1.34
SYPL1-202ENST00000455385 FAT1Q14517 4588 aa6.68□□□□□ -1.34
SYPL1-202ENST00000455385 A4D1N5 150 aa6.68□□□□□ -1.34
SYPL1-202ENST00000455385 M0R378 163 aa6.68□□□□□ -1.34
SYPL1-202ENST00000455385 TSTD3H0UI37 97 aa6.67□□□□□ -1.34
SYPL1-202ENST00000455385 TAL2Q16559 108 aa6.67□□□□□ -1.34
SYPL1-202ENST00000455385 COPS9Q8WXC6 57 aa6.67□□□□□ -1.34
SYPL1-202ENST00000455385 LBHQ53QV2 105 aaPredicted RBP6.67□□□□□ -1.34
SYPL1-202ENST00000455385 CEND1Q8N111 149 aa6.67□□□□□ -1.34
SYPL1-202ENST00000455385 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
SYPL1-202ENST00000455385 IGLV1-50A0A075B6I6 118 aa6.66□□□□□ -1.34
SYPL1-202ENST00000455385 TRBV10-2A0A0K0K1G8 114 aa6.66□□□□□ -1.34
SYPL1-202ENST00000455385 HSD52Q0P140 79 aa6.66□□□□□ -1.34
SYPL1-202ENST00000455385 TRBV10-3A0A0K0K1G6 114 aa6.65□□□□□ -1.34
SYPL1-202ENST00000455385 FXYD2P54710 66 aa6.65□□□□□ -1.34
SYPL1-202ENST00000455385 UBE2BP63146 152 aa6.65□□□□□ -1.34
SYPL1-202ENST00000455385 CTAG1AP78358 180 aa6.65□□□□□ -1.34
SYPL1-202ENST00000455385 LINC00528Q8N1L1 170 aa6.65□□□□□ -1.34
SYPL1-202ENST00000455385 IGLV6-57P01721 117 aa6.64□□□□□ -1.35
SYPL1-202ENST00000455385 PSORS1C2Q9UIG4 136 aa6.64□□□□□ -1.35
SYPL1-202ENST00000455385 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
SYPL1-202ENST00000455385 CFC1P0CG37 223 aa6.64□□□□□ -1.35
SYPL1-202ENST00000455385 DDTP30046 118 aa6.64□□□□□ -1.35
SYPL1-202ENST00000455385 VPS13BQ7Z7G8 4022 aa6.63□□□□□ -1.35
SYPL1-202ENST00000455385 OR13C6PQ8NH95 151 aa6.63□□□□□ -1.35
SYPL1-202ENST00000455385 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
SYPL1-202ENST00000455385 KRTAP10-4P60372 401 aaPredicted RBP6.62□□□□□ -1.35
SYPL1-202ENST00000455385 BVES-AS1Q5T3Y7 98 aa6.62□□□□□ -1.35
SYPL1-202ENST00000455385 KCNQ1DNQ9H478 68 aa6.62□□□□□ -1.35
SYPL1-202ENST00000455385 A6NDN8 102 aa6.61□□□□□ -1.35
SYPL1-202ENST00000455385 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
SYPL1-202ENST00000455385 HINT1P49773 126 aaPredicted RBP6.61□□□□□ -1.35
SYPL1-202ENST00000455385 Q8N1X5 172 aa6.61□□□□□ -1.35
SYPL1-202ENST00000455385 TRAV13-2A0A0B4J235 113 aa6.6□□□□□ -1.35
SYPL1-202ENST00000455385 RPL37AP61513 92 aaKnown RBP6.6□□□□□ -1.35
SYPL1-202ENST00000455385 C1orf137Q5JT78 98 aa6.6□□□□□ -1.35
SYPL1-202ENST00000455385 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
SYPL1-202ENST00000455385 Q5VSD8 79 aa6.59□□□□□ -1.35
SYPL1-202ENST00000455385 REG3GQ6UW15 175 aa6.59□□□□□ -1.35
SYPL1-202ENST00000455385 HERC2O95714 4834 aa6.59□□□□□ -1.35
SYPL1-202ENST00000455385 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
SYPL1-202ENST00000455385 FAM229AH3BQW9 127 aa6.59□□□□□ -1.35
SYPL1-202ENST00000455385 TRAV23DV6A0A075B6W5 121 aa6.58□□□□□ -1.36
SYPL1-202ENST00000455385 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
SYPL1-202ENST00000455385 TMEM238LA0A1B0GVL6 79 aa6.58□□□□□ -1.36
SYPL1-202ENST00000455385 A6NJY4 79 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms