RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ZNF706Q9Y5V0 76 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 STARD9Q9P2P6 4700 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 DNAH1Q9P2D7 4330 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 LYSTQ99698 3801 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGLV4-69A0A075B6H9 119 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 C11orf86A6NJI1 115 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGKCP01834 107 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 PLNP26678 52 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 UBE2D1P51668 147 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 FAM19A3Q7Z5A8 133 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 VAMP8Q9BV40 100 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 APLNQ9ULZ1 77 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 PKIGQ9Y2B9 76 aa3.43□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGLC3P0DOY3 106 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 TCTAP57738 103 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 HSD52Q0P140 79 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 OR13C6PQ8NH95 151 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 NAA38Q9BRA0 125 aaKnown RBP3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 KLK5Q9Y337 293 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 LINC00588Q9Y4M8 146 aa3.42□□□□□ -1.86
HMGB1P4-201ENST00000455362 DNAH6Q9C0G6 4158 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 TRAV13-1A0A0B4J241 112 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 LINC00959A0A1B0GUT2 108 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 NUPR2A6NF83 97 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 ANGP03950 147 aaKnown RBP3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 CCL18P55774 89 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 SEC11AP67812 179 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 COX6A2Q02221 97 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 Q6ZRU5 148 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 WFDC10BQ8IUB3 73 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 LINC00269Q8N2A0 174 aa3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 MRPS16Q9Y3D3 137 aaKnown RBP3.41□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGKV3OR2-268A0A0C4DH90 116 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-30P01768 117 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-33P01772 117 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 DNAH10OSP0CZ25 163 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-30-3P0DP02 117 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-30-5P0DP03 117 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 ZNF22P17026 224 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 HERVK_113P63121 156 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 LINC01556Q5JQF7 62 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 TMEM170BQ5T4T1 132 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 ENHOQ6UWT2 76 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 UPK3BQ9BT76 320 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 PRR34Q9NV39 138 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 CDKN2A-AS1Q9UH64 79 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 KLK12Q9UKR0 248 aa3.4□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGKV2D-26A0A0A0MRZ7 120 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 TMEM223A0PJW6 202 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 CCDC179H3BU77 68 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 SS18Q15532 418 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 ZFAND6Q6FIF0 208 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 CLPSL2Q6UWE3 100 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 UBE2WQ96B02 151 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 ALMS1Q8TCU4 4167 aa3.39□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGLV10-54A0A075B6I4 117 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 H3BRM9 83 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 SPINK8P0C7L1 97 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 COX8AP10176 69 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 XCL1P47992 114 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 HINT1P49773 126 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 SLC25A34Q6PIV7 304 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 C5orf38Q86SI9 138 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 UQCR10Q9UDW1 63 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 DNAH10Q8IVF4 4471 aa3.38□□□□□ -1.87
HMGB1P4-201ENST00000455362 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV3-64A0A075B6Q5 118 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGHV1-58A0A0C4DH39 117 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 J3QQQ9 107 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 LEPROTO15243 131 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 TSPEAR-AS2P59090 65 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 MIAQ16674 131 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 KRTAP26-1Q6PEX3 210 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 UBE2DNLQ8IWF7 75 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 TTTY13Q9BZ97 58 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 C8orf17Q9NRJ1 99 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 DNAH2Q9P225 4427 aa3.37□□□□□ -1.87
HMGB1P4-201ENST00000455362 FAM236DA0A1B0GTK5 79 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 MYMXA0A1B0GTQ4 84 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 FAM168BA1KXE4 195 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 K7EP34 96 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 COX7A2LO14548 114 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 BPY2O14599 106 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 CRPP02741 224 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 FAM236CP0DP71 79 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 C10orf126Q8N4M7 172 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 TP73-AS1Q9UF72 201 aa3.36□□□□□ -1.87
HMGB1P4-201ENST00000455362 LOC107984640A0A0U1RRK4 108 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 ZNF815PA8K554 130 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 C3orf84H3BNL1 204 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms