RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 REG3AQ06141 175 aa11.96□□□□□ -0.49
TCF3-204ENST00000453954 C10orf25Q5T742 122 aa11.96□□□□□ -0.5
TCF3-204ENST00000453954 TRAV10A0A0B4J240 114 aa11.95□□□□□ -0.5
TCF3-204ENST00000453954 SPATA3Q8NHX4 192 aa11.95□□□□□ -0.5
TCF3-204ENST00000453954 MPLKIPQ8TAP9 179 aa11.95□□□□□ -0.5
TCF3-204ENST00000453954 GIG44P09565 113 aaPredicted RBP11.94□□□□□ -0.5
TCF3-204ENST00000453954 A0A0U1RQV1 116 aa11.94□□□□□ -0.5
TCF3-204ENST00000453954 MAST4O15021 2626 aa11.94□□□□□ -0.5
TCF3-204ENST00000453954 F8WEM9 126 aa11.93□□□□□ -0.5
TCF3-204ENST00000453954 VWFP04275 2813 aa11.92□□□□□ -0.5
TCF3-204ENST00000453954 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
TCF3-204ENST00000453954 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.9□□□□□ -0.5
TCF3-204ENST00000453954 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
TCF3-204ENST00000453954 PRO0255Q9UI72 69 aa11.9□□□□□ -0.5
TCF3-204ENST00000453954 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.5
TCF3-204ENST00000453954 C3orf84H3BNL1 204 aa11.9□□□□□ -0.5
TCF3-204ENST00000453954 A0A096LNT2 108 aa11.89□□□□□ -0.51
TCF3-204ENST00000453954 Q8IZM0 81 aa11.89□□□□□ -0.51
TCF3-204ENST00000453954 PDZD2O15018 2839 aa11.89□□□□□ -0.51
TCF3-204ENST00000453954 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
TCF3-204ENST00000453954 CYSRT1A8MQ03 144 aa11.88□□□□□ -0.51
TCF3-204ENST00000453954 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
TCF3-204ENST00000453954 Q6ZVQ6 151 aa11.88□□□□□ -0.51
TCF3-204ENST00000453954 TRBV10-3A0A0K0K1G6 114 aa11.88□□□□□ -0.51
TCF3-204ENST00000453954 Q8NDZ9 215 aa11.88□□□□□ -0.51
TCF3-204ENST00000453954 SMR3AQ99954 134 aa11.87□□□□□ -0.51
TCF3-204ENST00000453954 NANOS2P60321 138 aaKnown RBP11.87□□□□□ -0.51
TCF3-204ENST00000453954 BRK1Q8WUW1 75 aa11.87□□□□□ -0.51
TCF3-204ENST00000453954 CD164L2Q6UWJ8 174 aa11.85□□□□□ -0.51
TCF3-204ENST00000453954 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
TCF3-204ENST00000453954 ZNF561-AS1K7EIQ3 104 aa11.84□□□□□ -0.51
TCF3-204ENST00000453954 NDUFC2O95298 119 aa11.84□□□□□ -0.51
TCF3-204ENST00000453954 LINC00575Q6W349 94 aa11.84□□□□□ -0.51
TCF3-204ENST00000453954 COL6A5A8TX70 2615 aa11.83□□□□□ -0.51
TCF3-204ENST00000453954 FAM19A3Q7Z5A8 133 aa11.83□□□□□ -0.52
TCF3-204ENST00000453954 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
TCF3-204ENST00000453954 DIRC1Q969H9 104 aa11.83□□□□□ -0.52
TCF3-204ENST00000453954 CELA1Q9UNI1 258 aa11.83□□□□□ -0.52
TCF3-204ENST00000453954 LINC00474Q9P2X8 69 aa11.82□□□□□ -0.52
TCF3-204ENST00000453954 PRR4Q16378 134 aa11.82□□□□□ -0.52
TCF3-204ENST00000453954 RPS28P62857 69 aaKnown RBP11.81□□□□□ -0.52
TCF3-204ENST00000453954 CAMK2N2Q96S95 79 aa11.81□□□□□ -0.52
TCF3-204ENST00000453954 AKAP9Q99996 3911 aa11.81□□□□□ -0.52
TCF3-204ENST00000453954 ATP5EP2Q5VTU8 51 aa11.8□□□□□ -0.52
TCF3-204ENST00000453954 Q6ZQT0 140 aa11.79□□□□□ -0.52
TCF3-204ENST00000453954 CMC4P56277 68 aaPredicted RBP11.79□□□□□ -0.52
TCF3-204ENST00000453954 OBSCN-AS1Q96MR7 158 aa11.78□□□□□ -0.52
TCF3-204ENST00000453954 IGLV1-51P01701 117 aa11.78□□□□□ -0.52
TCF3-204ENST00000453954 COX7BP24311 80 aa11.78□□□□□ -0.52
TCF3-204ENST00000453954 TRAV7A0A075B6U4 112 aa11.78□□□□□ -0.52
TCF3-204ENST00000453954 NREPQ16612 68 aa11.77□□□□□ -0.52
TCF3-204ENST00000453954 STAB1Q9NY15 2570 aa11.77□□□□□ -0.53
TCF3-204ENST00000453954 BPY2O14599 106 aa11.77□□□□□ -0.53
TCF3-204ENST00000453954 LINC00336Q6ZUF6 198 aa11.76□□□□□ -0.53
TCF3-204ENST00000453954 MUC7Q8TAX7 377 aa11.76□□□□□ -0.53
TCF3-204ENST00000453954 LY6G6DO95868 133 aa11.76□□□□□ -0.53
TCF3-204ENST00000453954 KIAA0087Q14695 138 aa11.76□□□□□ -0.53
TCF3-204ENST00000453954 CSNK1G2-AS1Q8NCQ2 148 aa11.75□□□□□ -0.53
TCF3-204ENST00000453954 ZNF73O43830 326 aaPredicted RBP11.74□□□□□ -0.53
TCF3-204ENST00000453954 Q5XG85 94 aa11.74□□□□□ -0.53
TCF3-204ENST00000453954 PKD1L1Q8TDX9 2849 aa11.74□□□□□ -0.53
TCF3-204ENST00000453954 NBPF19A0A087WUL8 3843 aa11.74□□□□□ -0.53
TCF3-204ENST00000453954 ZNF469Q96JG9 3925 aaPredicted RBP11.74□□□□□ -0.53
TCF3-204ENST00000453954 H7BZZ5 65 aa11.73□□□□□ -0.53
TCF3-204ENST00000453954 FSHBP01225 129 aa11.73□□□□□ -0.53
TCF3-204ENST00000453954 MIFP14174 115 aa11.72□□□□□ -0.53
TCF3-204ENST00000453954 IGKV2D-24A0A075B6R9 120 aa11.71□□□□□ -0.53
TCF3-204ENST00000453954 C19orf73Q9NVV2 129 aa11.71□□□□□ -0.53
TCF3-204ENST00000453954 FAM30AQ9NZY2 134 aa11.71□□□□□ -0.53
TCF3-204ENST00000453954 A0A1B0GUV1 79 aa11.71□□□□□ -0.54
TCF3-204ENST00000453954 SERP1Q9Y6X1 66 aa11.7□□□□□ -0.54
TCF3-204ENST00000453954 TENM1Q9UKZ4 2725 aa11.69□□□□□ -0.54
TCF3-204ENST00000453954 TRBV7-6A0A0J9YX20 115 aa11.69□□□□□ -0.54
TCF3-204ENST00000453954 RPL37AP8A6NKH3 93 aa11.69□□□□□ -0.54
TCF3-204ENST00000453954 COX17Q14061 63 aa11.68□□□□□ -0.54
TCF3-204ENST00000453954 X6R8D5 127 aa11.68□□□□□ -0.54
TCF3-204ENST00000453954 C6orf48Q9UBA6 75 aa11.67□□□□□ -0.54
TCF3-204ENST00000453954 NKAPP1Q8N9T2 125 aa11.67□□□□□ -0.54
TCF3-204ENST00000453954 NSD1Q96L73 2696 aaPredicted RBP11.66□□□□□ -0.54
TCF3-204ENST00000453954 TMEM254Q8TBM7 123 aa11.66□□□□□ -0.54
TCF3-204ENST00000453954 HIGD2AQ9BW72 106 aa11.66□□□□□ -0.54
TCF3-204ENST00000453954 LYPD5Q6UWN5 251 aa11.64□□□□□ -0.55
TCF3-204ENST00000453954 DEFB116Q30KQ4 102 aa11.63□□□□□ -0.55
TCF3-204ENST00000453954 WFDC10BQ8IUB3 73 aa11.63□□□□□ -0.55
TCF3-204ENST00000453954 SMIM26A0A096LP01 95 aa11.63□□□□□ -0.55
TCF3-204ENST00000453954 RETNQ9HD89 108 aa11.63□□□□□ -0.55
TCF3-204ENST00000453954 SPART-AS1P0CW21 52 aa11.62□□□□□ -0.55
TCF3-204ENST00000453954 FUSP35637 526 aaKnown RBP eCLIP11.62□□□□□ -0.556e-7■■■□□ 16.7
TCF3-204ENST00000453954 NDUFC2-KCTD14E9PQ53 114 aa11.62□□□□□ -0.55
TCF3-204ENST00000453954 Q6ZRU5 148 aa11.61□□□□□ -0.55
TCF3-204ENST00000453954 LINC00167Q96N53 147 aa11.59□□□□□ -0.55
TCF3-204ENST00000453954 PDE6GP18545 87 aa11.59□□□□□ -0.55
TCF3-204ENST00000453954 A0A0G2JQZ4 141 aa11.58□□□□□ -0.56
TCF3-204ENST00000453954 A0A1W2PNN7 141 aa11.58□□□□□ -0.56
TCF3-204ENST00000453954 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
TCF3-204ENST00000453954 FBN1P35555 2871 aaKnown RBP11.57□□□□□ -0.56
TCF3-204ENST00000453954 IGLV6-57P01721 117 aa11.57□□□□□ -0.56
TCF3-204ENST00000453954 APOC4P55056 127 aa11.57□□□□□ -0.56
TCF3-204ENST00000453954 LOC110117498A0A087WWA1 95 aa11.56□□□□□ -0.56
TCF3-204ENST00000453954 UBE2BP63146 152 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms