RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-215ENST00000453724 UNQ6190/PRO20217Q6UXQ8 127 aa3.97□□□□□ -1.77
RPE-215ENST00000453724 PLAC8Q9NZF1 115 aa3.97□□□□□ -1.77
RPE-215ENST00000453724 FAM30AQ9NZY2 134 aa3.97□□□□□ -1.77
RPE-215ENST00000453724 C6orf48Q9UBA6 75 aa3.97□□□□□ -1.77
RPE-215ENST00000453724 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.97□□□□□ -1.77
RPE-215ENST00000453724 IGKV2-24A0A0C4DH68 120 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 FAM229AH3BQW9 127 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 H3BUT2 72 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 K7EP34 96 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 K7ERU9 68 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 PCP4P48539 62 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 HERV-K104P63124 156 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 OCIAD2Q56VL3 154 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 C2orf82Q6UX34 121 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 PCP2Q8IVA1 136 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 CIRBP-AS1Q8TBR5 109 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 PLEKHB2Q96CS7 222 aa3.96□□□□□ -1.78
RPE-215ENST00000453724 A0A087WYN8 130 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 A0A1W2PPM0 123 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 EPM2AB3EWF7 344 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 LEPROTO15243 131 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 PLA2G1BP04054 148 aaKnown RBP3.95□□□□□ -1.78
RPE-215ENST00000453724 CHTF8P0CG12 524 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 FABP2P12104 132 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 GAGE2BQ13066 116 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 C10orf25Q5T742 122 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 CEND1Q8N111 149 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 C7orf33Q8WU49 177 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 DPH3Q96FX2 82 aa3.95□□□□□ -1.78
RPE-215ENST00000453724 IGKV2D-26A0A0A0MRZ7 120 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 MYMXA0A1B0GTQ4 84 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 E9PLD3 99 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 Q6ZRP5 223 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 LINC00528Q8N1L1 170 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 RAB37Q96AX2 223 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 ZNF625Q96I27 306 aaPredicted RBP3.94□□□□□ -1.78
RPE-215ENST00000453724 VPS25Q9BRG1 176 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 ERG28Q9UKR5 140 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 SPCS1Q9Y6A9 102 aa3.94□□□□□ -1.78
RPE-215ENST00000453724 PANO1I0J062 215 aa3.93□□□□□ -1.78
RPE-215ENST00000453724 J3QQQ9 107 aa3.93□□□□□ -1.78
RPE-215ENST00000453724 INAFM2P0DMQ5 153 aa3.93□□□□□ -1.78
RPE-215ENST00000453724 LGALS3P17931 250 aaKnown RBP3.93□□□□□ -1.78
RPE-215ENST00000453724 FXYD2P54710 66 aa3.93□□□□□ -1.78
RPE-215ENST00000453724 Q5VSD8 79 aa3.93□□□□□ -1.78
RPE-215ENST00000453724 NDUFA12Q9UI09 145 aa3.93□□□□□ -1.78
RPE-215ENST00000453724 PLA2G2DQ9UNK4 145 aa3.93□□□□□ -1.78
RPE-215ENST00000453724 GAGE2EQ4V326 116 aa3.92□□□□□ -1.78
RPE-215ENST00000453724 C9orf116Q5BN46 136 aaPredicted RBP3.92□□□□□ -1.78
RPE-215ENST00000453724 HIST1H4GQ99525 98 aa3.92□□□□□ -1.78
RPE-215ENST00000453724 NHP2Q9NX24 153 aaKnown RBP3.92□□□□□ -1.78
RPE-215ENST00000453724 GAGE2DQ9UEU5 116 aa3.92□□□□□ -1.78
RPE-215ENST00000453724 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 TMEM238LA0A1B0GVL6 79 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 A6NJY4 79 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 M0QXV9 152 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 RPL37AP61513 92 aaKnown RBP3.91□□□□□ -1.78
RPE-215ENST00000453724 HAMPP81172 84 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 MEIG1Q5JSS6 88 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 NAA38Q9BRA0 125 aaKnown RBP3.91□□□□□ -1.78
RPE-215ENST00000453724 TTTY13Q9BZ97 58 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 DNAH8Q96JB1 4490 aa3.91□□□□□ -1.78
RPE-215ENST00000453724 A0A1B0GWB2 263 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 F8W1H4 67 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 J3QR89 54 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 TIMM17BO60830 172 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 SMR3BP02814 79 aaPredicted RBP3.9□□□□□ -1.79
RPE-215ENST00000453724 PFN2P35080 140 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 LINC00158P58513 81 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 TSPEAR-AS2P59090 65 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 RPL24P83731 157 aaKnown RBP3.9□□□□□ -1.79
RPE-215ENST00000453724 C21orf62-AS1Q17RA5 79 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 C9orf129Q5T035 196 aaKnown RBP3.9□□□□□ -1.79
RPE-215ENST00000453724 FAM19A5Q7Z5A7 132 aaPredicted RBP3.9□□□□□ -1.79
RPE-215ENST00000453724 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.79
RPE-215ENST00000453724 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.79
RPE-215ENST00000453724 A0A1W2PNN7 141 aa3.89□□□□□ -1.79
RPE-215ENST00000453724 ZNF815PA8K554 130 aa3.89□□□□□ -1.79
RPE-215ENST00000453724 K7ERJ3 54 aa3.89□□□□□ -1.79
RPE-215ENST00000453724 PRR3P79522 188 aaKnown RBP3.89□□□□□ -1.79
RPE-215ENST00000453724 SRSF9Q13242 221 aaKnown RBP eCLIP3.89□□□□□ -1.794e-6■■□□□ 11.4
RPE-215ENST00000453724 LYRM7Q5U5X0 104 aa3.89□□□□□ -1.79
RPE-215ENST00000453724 SCGB1D4Q6XE38 83 aa3.89□□□□□ -1.79
RPE-215ENST00000453724 MRPL55Q7Z7F7 128 aaKnown RBP3.89□□□□□ -1.79
RPE-215ENST00000453724 COPS9Q8WXC6 57 aa3.89□□□□□ -1.79
RPE-215ENST00000453724 SND1-IT1Q9HBX3 110 aa3.89□□□□□ -1.79
RPE-215ENST00000453724 XAGE1AQ9HD64 81 aa3.89□□□□□ -1.79
RPE-215ENST00000453724 LOC107984156A0A0G2JMH3 177 aa3.88□□□□□ -1.79
RPE-215ENST00000453724 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
RPE-215ENST00000453724 ARL17AQ8IVW1 177 aa3.88□□□□□ -1.79
RPE-215ENST00000453724 MIR7-3HGQ8N6C7 128 aa3.88□□□□□ -1.79
RPE-215ENST00000453724 PPDPFQ9H3Y8 114 aa3.88□□□□□ -1.79
RPE-215ENST00000453724 A0A0J9YXY3 114 aa3.87□□□□□ -1.79
RPE-215ENST00000453724 TMEM238C9JI98 176 aa3.87□□□□□ -1.79
RPE-215ENST00000453724 UBE2BP63146 152 aa3.87□□□□□ -1.79
RPE-215ENST00000453724 SERTAD4-AS1Q5TG53 156 aa3.87□□□□□ -1.79
RPE-215ENST00000453724 PHF5AQ7RTV0 110 aaKnown RBP3.87□□□□□ -1.79
RPE-215ENST00000453724 SPANXB1Q9NS25 103 aaPredicted RBP3.87□□□□□ -1.79
RPE-215ENST00000453724 C22orf24Q9Y442 160 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms