RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SLPIP03973 132 aa7.87□□□□□ -1.15
VTA1-203ENST00000452973 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
VTA1-203ENST00000452973 TRACP01848 142 aa7.87□□□□□ -1.15
VTA1-203ENST00000452973 RPL18AQ02543 176 aaKnown RBP7.86□□□□□ -1.15
VTA1-203ENST00000452973 MT-ATP8P03928 68 aa7.86□□□□□ -1.15
VTA1-203ENST00000452973 XGP55808 180 aa7.86□□□□□ -1.15
VTA1-203ENST00000452973 LINC01556Q5JQF7 62 aa7.86□□□□□ -1.15
VTA1-203ENST00000452973 COL7A1Q02388 2944 aa7.85□□□□□ -1.15
VTA1-203ENST00000452973 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
VTA1-203ENST00000452973 TMEM126AQ9H061 195 aa7.85□□□□□ -1.15
VTA1-203ENST00000452973 LINC00588Q9Y4M8 146 aa7.85□□□□□ -1.15
VTA1-203ENST00000452973 H0YGX0 51 aa7.85□□□□□ -1.15
VTA1-203ENST00000452973 Q6ZRU5 148 aa7.85□□□□□ -1.15
VTA1-203ENST00000452973 GAGE2EQ4V326 116 aa7.84□□□□□ -1.15
VTA1-203ENST00000452973 C15orf56Q8N910 161 aa7.84□□□□□ -1.15
VTA1-203ENST00000452973 GAGE2DQ9UEU5 116 aa7.84□□□□□ -1.15
VTA1-203ENST00000452973 NDUFC2O95298 119 aa7.84□□□□□ -1.15
VTA1-203ENST00000452973 C6orf99Q4VX62 202 aa7.83□□□□□ -1.16
VTA1-203ENST00000452973 LINC01600Q96MT4 127 aa7.83□□□□□ -1.16
VTA1-203ENST00000452973 C15orf53Q8NAA6 179 aa7.83□□□□□ -1.16
VTA1-203ENST00000452973 SMIM20Q8N5G0 67 aa7.82□□□□□ -1.16
VTA1-203ENST00000452973 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
VTA1-203ENST00000452973 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
VTA1-203ENST00000452973 DNAH10OSP0CZ25 163 aa7.81□□□□□ -1.16
VTA1-203ENST00000452973 C9orf129Q5T035 196 aaKnown RBP7.81□□□□□ -1.16
VTA1-203ENST00000452973 TENM2Q9NT68 2774 aa7.8□□□□□ -1.16
VTA1-203ENST00000452973 CASC10Q5T4H9 136 aa7.8□□□□□ -1.16
VTA1-203ENST00000452973 GVQW2A0A096LPI5 108 aaPredicted RBP7.79□□□□□ -1.16
VTA1-203ENST00000452973 HUWE1Q7Z6Z7 4374 aaKnown RBP7.79□□□□□ -1.16
VTA1-203ENST00000452973 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
VTA1-203ENST00000452973 TTC32Q5I0X7 151 aa7.79□□□□□ -1.16
VTA1-203ENST00000452973 SYCNQ0VAF6 134 aa7.78□□□□□ -1.16
VTA1-203ENST00000452973 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
VTA1-203ENST00000452973 GAGE2AQ6NT46 116 aa7.77□□□□□ -1.16
VTA1-203ENST00000452973 ORMDL1Q9P0S3 153 aa7.77□□□□□ -1.16
VTA1-203ENST00000452973 B5MCH6 92 aa7.77□□□□□ -1.17
VTA1-203ENST00000452973 Q6ZRP5 223 aa7.77□□□□□ -1.17
VTA1-203ENST00000452973 Q8N814 137 aa7.77□□□□□ -1.17
VTA1-203ENST00000452973 SNCGO76070 127 aa7.77□□□□□ -1.17
VTA1-203ENST00000452973 NDUFC2-KCTD14E9PQ53 114 aa7.76□□□□□ -1.17
VTA1-203ENST00000452973 MUC7Q8TAX7 377 aa7.76□□□□□ -1.17
VTA1-203ENST00000452973 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
VTA1-203ENST00000452973 USP17L23D6RBM5 183 aa7.75□□□□□ -1.17
VTA1-203ENST00000452973 IGLV6-57P01721 117 aa7.75□□□□□ -1.17
VTA1-203ENST00000452973 LYSTQ99698 3801 aa7.75□□□□□ -1.17
VTA1-203ENST00000452973 TRAV23DV6A0A075B6W5 121 aa7.74□□□□□ -1.17
VTA1-203ENST00000452973 INAFM2P0DMQ5 153 aa7.74□□□□□ -1.17
VTA1-203ENST00000452973 VPREB1P12018 145 aa7.73□□□□□ -1.17
VTA1-203ENST00000452973 UBE2DNLQ8IWF7 75 aa7.73□□□□□ -1.17
VTA1-203ENST00000452973 LINC00575Q6W349 94 aa7.73□□□□□ -1.17
VTA1-203ENST00000452973 hADV29S1A0JD25 119 aa7.72□□□□□ -1.17
VTA1-203ENST00000452973 ZNF73O43830 326 aaPredicted RBP7.71□□□□□ -1.17
VTA1-203ENST00000452973 DIRC1Q969H9 104 aa7.71□□□□□ -1.17
VTA1-203ENST00000452973 FAM240AA0A1B0GVK7 77 aa7.71□□□□□ -1.18
VTA1-203ENST00000452973 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
VTA1-203ENST00000452973 M0R378 163 aa7.7□□□□□ -1.18
VTA1-203ENST00000452973 Q6ZQY7 126 aa7.7□□□□□ -1.18
VTA1-203ENST00000452973 SMCR5Q8TEV8 140 aa7.7□□□□□ -1.18
VTA1-203ENST00000452973 RMI2Q96E14 147 aa7.7□□□□□ -1.18
VTA1-203ENST00000452973 KRTAP1-5Q9BYS1 174 aa7.7□□□□□ -1.18
VTA1-203ENST00000452973 TMEM256-PLSCR3K7ERE1 68 aa7.69□□□□□ -1.18
VTA1-203ENST00000452973 NKAPP1Q8N9T2 125 aa7.69□□□□□ -1.18
VTA1-203ENST00000452973 SERTAD4-AS1Q5TG53 156 aa7.69□□□□□ -1.18
VTA1-203ENST00000452973 B9D2Q9BPU9 175 aa7.69□□□□□ -1.18
VTA1-203ENST00000452973 A0A1B0GX51 115 aa7.69□□□□□ -1.18
VTA1-203ENST00000452973 FAM168BA1KXE4 195 aa7.68□□□□□ -1.18
VTA1-203ENST00000452973 LAMTOR3Q9UHA4 124 aa7.68□□□□□ -1.18
VTA1-203ENST00000452973 PSCAO43653 123 aa7.68□□□□□ -1.18
VTA1-203ENST00000452973 ACYP1P07311 99 aa7.68□□□□□ -1.18
VTA1-203ENST00000452973 COX7BP24311 80 aa7.68□□□□□ -1.18
VTA1-203ENST00000452973 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
VTA1-203ENST00000452973 UPK3BQ9BT76 320 aa7.68□□□□□ -1.18
VTA1-203ENST00000452973 RPL37AP8A6NKH3 93 aa7.67□□□□□ -1.18
VTA1-203ENST00000452973 ANAPC13Q9BS18 74 aa7.67□□□□□ -1.18
VTA1-203ENST00000452973 OBSCN-AS1Q96MR7 158 aa7.65□□□□□ -1.18
VTA1-203ENST00000452973 APLNQ9ULZ1 77 aa7.65□□□□□ -1.18
VTA1-203ENST00000452973 CSMD3Q7Z407 3707 aa7.65□□□□□ -1.18
VTA1-203ENST00000452973 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.65□□□□□ -1.19
VTA1-203ENST00000452973 F8WDY8 70 aa7.65□□□□□ -1.19
VTA1-203ENST00000452973 C7orf33Q8WU49 177 aa7.65□□□□□ -1.19
VTA1-203ENST00000452973 FAM19A5Q7Z5A7 132 aaPredicted RBP7.64□□□□□ -1.19
VTA1-203ENST00000452973 LINC00846Q9NV44 126 aa7.64□□□□□ -1.19
VTA1-203ENST00000452973 DNAH9Q9NYC9 4486 aa7.64□□□□□ -1.19
VTA1-203ENST00000452973 JMJD7-PLA2G4BH0Y9G9 81 aa7.64□□□□□ -1.19
VTA1-203ENST00000452973 ELOF1P60002 83 aaKnown RBP7.64□□□□□ -1.19
VTA1-203ENST00000452973 IGKV2-24A0A0C4DH68 120 aa7.63□□□□□ -1.19
VTA1-203ENST00000452973 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
VTA1-203ENST00000452973 RBM3P98179 157 aaKnown RBP7.61□□□□□ -1.19
VTA1-203ENST00000452973 IGKV3D-7A0A0C4DH55 119 aa7.61□□□□□ -1.19
VTA1-203ENST00000452973 CCKP06307 115 aa7.61□□□□□ -1.19
VTA1-203ENST00000452973 DEFB105AQ8NG35 78 aa7.61□□□□□ -1.19
VTA1-203ENST00000452973 DNAH7Q8WXX0 4024 aa7.61□□□□□ -1.19
VTA1-203ENST00000452973 DNAH10Q8IVF4 4471 aa7.6□□□□□ -1.19
VTA1-203ENST00000452973 CCDC179H3BU77 68 aa7.6□□□□□ -1.19
VTA1-203ENST00000452973 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
VTA1-203ENST00000452973 MEGF8Q7Z7M0 2845 aa7.6□□□□□ -1.19
VTA1-203ENST00000452973 SDIM1Q6ZPB5 146 aa7.6□□□□□ -1.19
VTA1-203ENST00000452973 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
VTA1-203ENST00000452973 M0R2N4 97 aa7.59□□□□□ -1.19
VTA1-203ENST00000452973 NDUFV3P56181 108 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms