RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-208ENST00000448732 A0A0U1RQV1 116 aa13.48□□□□□ -0.25
R3HDM2-208ENST00000448732 CTAG1AP78358 180 aa13.48□□□□□ -0.25
R3HDM2-208ENST00000448732 TMEM170BQ5T4T1 132 aa13.47□□□□□ -0.25
R3HDM2-208ENST00000448732 PLEKHB2Q96CS7 222 aa13.47□□□□□ -0.25
R3HDM2-208ENST00000448732 RETNLBQ9BQ08 111 aa13.46□□□□□ -0.25
R3HDM2-208ENST00000448732 CBLN2Q8IUK8 224 aa13.44□□□□□ -0.26
R3HDM2-208ENST00000448732 LINC00158P58513 81 aa13.42□□□□□ -0.26
R3HDM2-208ENST00000448732 CHTOPQ9Y3Y2 248 aaKnown RBP13.42□□□□□ -0.26
R3HDM2-208ENST00000448732 TMEM223A0PJW6 202 aa13.39□□□□□ -0.27
R3HDM2-208ENST00000448732 TPRXLQ17RH7 258 aa13.39□□□□□ -0.27
R3HDM2-208ENST00000448732 C3orf22Q8N5N4 141 aa13.38□□□□□ -0.27
R3HDM2-208ENST00000448732 HIGD2AQ9BW72 106 aa13.38□□□□□ -0.27
R3HDM2-208ENST00000448732 IGLV7-46A0A075B6I9 117 aa13.37□□□□□ -0.27
R3HDM2-208ENST00000448732 TRAV12-1A0A0B4J245 112 aa13.36□□□□□ -0.27
R3HDM2-208ENST00000448732 A0A0U1RRA0 63 aa13.35□□□□□ -0.27
R3HDM2-208ENST00000448732 SPRR4Q96PI1 79 aa13.35□□□□□ -0.27
R3HDM2-208ENST00000448732 CDIP1Q9H305 208 aa13.35□□□□□ -0.27
R3HDM2-208ENST00000448732 APOC3P02656 99 aa13.34□□□□□ -0.27
R3HDM2-208ENST00000448732 SPAG11AQ6PDA7 123 aa13.34□□□□□ -0.27
R3HDM2-208ENST00000448732 IFI27L1Q96BM0 104 aa13.34□□□□□ -0.27
R3HDM2-208ENST00000448732 CHCHD1Q96BP2 118 aaKnown RBP13.34□□□□□ -0.27
R3HDM2-208ENST00000448732 SMIM13P0DJ93 91 aa13.32□□□□□ -0.28
R3HDM2-208ENST00000448732 ATP6V1G1O75348 118 aa13.31□□□□□ -0.28
R3HDM2-208ENST00000448732 SNAPINO95295 136 aa13.31□□□□□ -0.28
R3HDM2-208ENST00000448732 PRYO14603 147 aa13.3□□□□□ -0.28
R3HDM2-208ENST00000448732 LCE2AQ5TA79 106 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-208ENST00000448732 BOD1L2Q8IYS8 172 aa13.3□□□□□ -0.28
R3HDM2-208ENST00000448732 SVBPQ8N300 66 aa13.3□□□□□ -0.28
R3HDM2-208ENST00000448732 ZNF706Q9Y5V0 76 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-208ENST00000448732 SPRR1AP35321 89 aa13.29□□□□□ -0.28
R3HDM2-208ENST00000448732 HERV-K104P63124 156 aa13.29□□□□□ -0.28
R3HDM2-208ENST00000448732 LINC00337Q8N6G1 96 aa13.29□□□□□ -0.28
R3HDM2-208ENST00000448732 YPEL4Q96NS1 127 aa13.29□□□□□ -0.28
R3HDM2-208ENST00000448732 PPDPFQ9H3Y8 114 aa13.29□□□□□ -0.28
R3HDM2-208ENST00000448732 KCNQ1DNQ9H478 68 aa13.29□□□□□ -0.28
R3HDM2-208ENST00000448732 MIR7-3HGQ8N6C7 128 aa13.28□□□□□ -0.28
R3HDM2-208ENST00000448732 NDUFA5Q16718 116 aa13.27□□□□□ -0.29
R3HDM2-208ENST00000448732 MEIG1Q5JSS6 88 aa13.27□□□□□ -0.29
R3HDM2-208ENST00000448732 LINC00587B1AMM8 73 aa13.26□□□□□ -0.29
R3HDM2-208ENST00000448732 KRTAP4-16G5E9R7 235 aaPredicted RBP13.25□□□□□ -0.29
R3HDM2-208ENST00000448732 NCR3O14931 201 aa13.25□□□□□ -0.29
R3HDM2-208ENST00000448732 C4orf48Q5BLP8 95 aa13.25□□□□□ -0.29
R3HDM2-208ENST00000448732 SMCR5Q8TEV8 140 aa13.25□□□□□ -0.29
R3HDM2-208ENST00000448732 NDUFA12Q9UI09 145 aa13.24□□□□□ -0.29
R3HDM2-208ENST00000448732 FAT4Q6V0I7 4981 aa13.24□□□□□ -0.29
R3HDM2-208ENST00000448732 FP248Q71RG6 208 aaPredicted RBP13.23□□□□□ -0.29
R3HDM2-208ENST00000448732 MUC17Q685J3 4493 aa13.23□□□□□ -0.29
R3HDM2-208ENST00000448732 MYMXA0A1B0GTQ4 84 aa13.22□□□□□ -0.29
R3HDM2-208ENST00000448732 ETDCA0A1B0GVM5 59 aa13.21□□□□□ -0.29
R3HDM2-208ENST00000448732 FAM19A2Q8N3H0 131 aa13.21□□□□□ -0.29
R3HDM2-208ENST00000448732 Q8NBF4 154 aa13.21□□□□□ -0.29
R3HDM2-208ENST00000448732 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.29
R3HDM2-208ENST00000448732 TRBV10-3A0A0K0K1G6 114 aa13.2□□□□□ -0.3
R3HDM2-208ENST00000448732 HSBP1O75506 76 aa13.2□□□□□ -0.3
R3HDM2-208ENST00000448732 DAND5Q8N907 189 aa13.2□□□□□ -0.3
R3HDM2-208ENST00000448732 KRTAP9-2Q9BYQ4 174 aa13.2□□□□□ -0.3
R3HDM2-208ENST00000448732 LOC107984156A0A0G2JMH3 177 aa13.18□□□□□ -0.3
R3HDM2-208ENST00000448732 LINC00483Q53H64 154 aa13.18□□□□□ -0.3
R3HDM2-208ENST00000448732 ARL17AQ8IVW1 177 aa13.18□□□□□ -0.3
R3HDM2-208ENST00000448732 SPINK1P00995 79 aa13.16□□□□□ -0.3
R3HDM2-208ENST00000448732 S100A12P80511 92 aa13.16□□□□□ -0.3
R3HDM2-208ENST00000448732 B5MCH6 92 aa13.15□□□□□ -0.3
R3HDM2-208ENST00000448732 TSPEAR-AS2P59090 65 aa13.15□□□□□ -0.3
R3HDM2-208ENST00000448732 H0Y8G0 127 aa13.14□□□□□ -0.31
R3HDM2-208ENST00000448732 LEPROTO15243 131 aa13.14□□□□□ -0.31
R3HDM2-208ENST00000448732 TRBV10-2A0A0K0K1G8 114 aa13.13□□□□□ -0.31
R3HDM2-208ENST00000448732 KRTAP13-3Q3SY46 172 aa13.13□□□□□ -0.31
R3HDM2-208ENST00000448732 GAGE2AQ6NT46 116 aa13.12□□□□□ -0.31
R3HDM2-208ENST00000448732 ERC2-IT1O76042 136 aa13.11□□□□□ -0.31
R3HDM2-208ENST00000448732 LEPROTL1O95214 131 aa13.11□□□□□ -0.31
R3HDM2-208ENST00000448732 DDTP30046 118 aa13.11□□□□□ -0.31
R3HDM2-208ENST00000448732 PLNP26678 52 aa13.1□□□□□ -0.31
R3HDM2-208ENST00000448732 J3QQQ9 107 aa13.09□□□□□ -0.31
R3HDM2-208ENST00000448732 TRGC2P03986 189 aa13.09□□□□□ -0.31
R3HDM2-208ENST00000448732 LINC00310P59036 64 aa13.09□□□□□ -0.31
R3HDM2-208ENST00000448732 SSBP3-AS1Q7Z2R9 100 aa13.09□□□□□ -0.31
R3HDM2-208ENST00000448732 Q9BRP9 147 aa13.08□□□□□ -0.32
R3HDM2-208ENST00000448732 SERF1AO75920 110 aa13.07□□□□□ -0.32
R3HDM2-208ENST00000448732 SPANXB1Q9NS25 103 aaPredicted RBP13.07□□□□□ -0.32
R3HDM2-208ENST00000448732 IGLV9-49A0A0B4J1Y8 123 aa13.06□□□□□ -0.32
R3HDM2-208ENST00000448732 NMUP48645 174 aa13.06□□□□□ -0.32
R3HDM2-208ENST00000448732 RPS29P62273 56 aaKnown RBP13.06□□□□□ -0.32
R3HDM2-208ENST00000448732 MOBPQ13875 183 aa13.06□□□□□ -0.32
R3HDM2-208ENST00000448732 ASB16-AS1Q495Z4 193 aa13.06□□□□□ -0.32
R3HDM2-208ENST00000448732 Q6ZRX8 168 aa13.06□□□□□ -0.32
R3HDM2-208ENST00000448732 DPM2O94777 84 aa13.05□□□□□ -0.32
R3HDM2-208ENST00000448732 NDUFC2O95298 119 aa13.05□□□□□ -0.32
R3HDM2-208ENST00000448732 HSPB8Q9UJY1 196 aa13.05□□□□□ -0.32
R3HDM2-208ENST00000448732 IGLV6-57P01721 117 aa13.04□□□□□ -0.32
R3HDM2-208ENST00000448732 HERVK_113P61574 105 aa13.04□□□□□ -0.32
R3HDM2-208ENST00000448732 MIEN1Q9BRT3 115 aa13.04□□□□□ -0.32
R3HDM2-208ENST00000448732 Q8N377 158 aa13.03□□□□□ -0.32
R3HDM2-208ENST00000448732 LGALS3P17931 250 aaKnown RBP13.02□□□□□ -0.33
R3HDM2-208ENST00000448732 S100A7L2Q5SY68 101 aa13.02□□□□□ -0.33
R3HDM2-208ENST00000448732 PMCHL2Q9BQD1 86 aa13.02□□□□□ -0.33
R3HDM2-208ENST00000448732 IGKCP01834 107 aa13.01□□□□□ -0.33
R3HDM2-208ENST00000448732 FABP4P15090 132 aa13.01□□□□□ -0.33
R3HDM2-208ENST00000448732 JOSD1Q15040 202 aaPredicted RBP12.99□□□□□ -0.33
R3HDM2-208ENST00000448732 TRAV23DV6A0A075B6W5 121 aa12.98□□□□□ -0.33
R3HDM2-208ENST00000448732 SLC25A20O43772 301 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms