RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 AMELXQ99217 191 aa6.37□□□□□ -1.39
NIPBL-202ENST00000448238 Q6ZQT0 140 aa6.36□□□□□ -1.39
NIPBL-202ENST00000448238 SPRNQ5BIV9 151 aa6.36□□□□□ -1.39
NIPBL-202ENST00000448238 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
NIPBL-202ENST00000448238 BPTFQ12830 3046 aa6.35□□□□□ -1.39
NIPBL-202ENST00000448238 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
NIPBL-202ENST00000448238 PRO3102Q9H379 93 aa6.35□□□□□ -1.39
NIPBL-202ENST00000448238 CDIP1Q9H305 208 aa6.35□□□□□ -1.39
NIPBL-202ENST00000448238 Q8NBF4 154 aa6.35□□□□□ -1.39
NIPBL-202ENST00000448238 ADAMTSL4-AS1Q5T5F5 129 aa6.35□□□□□ -1.39
NIPBL-202ENST00000448238 FAM19A4Q96LR4 140 aa6.34□□□□□ -1.39
NIPBL-202ENST00000448238 IGLV4-60A0A075B6I1 120 aa6.34□□□□□ -1.39
NIPBL-202ENST00000448238 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
NIPBL-202ENST00000448238 A8MUN3 132 aa6.33□□□□□ -1.4
NIPBL-202ENST00000448238 ADORA2A-AS1P86434 159 aa6.33□□□□□ -1.4
NIPBL-202ENST00000448238 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 LMO4P61968 165 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 TM2D3Q9BRN9 247 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 C22orf24Q9Y442 160 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 Q1T7F1 81 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 PCSK5Q92824 1860 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 LTBP1Q14766 1721 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 AVPP01185 164 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 PIP4P1Q86T03 277 aa6.32□□□□□ -1.4
NIPBL-202ENST00000448238 A8MWP4 228 aa6.31□□□□□ -1.4
NIPBL-202ENST00000448238 PLA2G2CQ5R387 149 aa6.31□□□□□ -1.4
NIPBL-202ENST00000448238 Q96NJ1 140 aa6.31□□□□□ -1.4
NIPBL-202ENST00000448238 TRBV7-4A0A0J9YYF1 115 aa6.3□□□□□ -1.4
NIPBL-202ENST00000448238 KIF25-AS1Q9Y6Z4 181 aa6.3□□□□□ -1.4
NIPBL-202ENST00000448238 A8MTW9 85 aa6.3□□□□□ -1.4
NIPBL-202ENST00000448238 LINC01006Q8NI28 216 aa6.3□□□□□ -1.4
NIPBL-202ENST00000448238 INAFM1C9JVW0 142 aa6.29□□□□□ -1.4
NIPBL-202ENST00000448238 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
NIPBL-202ENST00000448238 LINC00476Q8WZB0 136 aa6.28□□□□□ -1.4
NIPBL-202ENST00000448238 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
NIPBL-202ENST00000448238 Q6ZRP5 223 aa6.27□□□□□ -1.41
NIPBL-202ENST00000448238 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.41
NIPBL-202ENST00000448238 Q6ZRU5 148 aa6.26□□□□□ -1.41
NIPBL-202ENST00000448238 STAB1Q9NY15 2570 aa6.26□□□□□ -1.41
NIPBL-202ENST00000448238 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
NIPBL-202ENST00000448238 U3KQA8 63 aa6.26□□□□□ -1.41
NIPBL-202ENST00000448238 H3BS24 57 aa6.26□□□□□ -1.41
NIPBL-202ENST00000448238 PRR9Q5T870 116 aa6.25□□□□□ -1.41
NIPBL-202ENST00000448238 COL27A1Q8IZC6 1860 aaPredicted RBP6.25□□□□□ -1.41
NIPBL-202ENST00000448238 Q6ZRX8 168 aa6.25□□□□□ -1.41
NIPBL-202ENST00000448238 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
NIPBL-202ENST00000448238 IGLV1-40P01703 118 aa6.24□□□□□ -1.41
NIPBL-202ENST00000448238 ANKRD11Q6UB99 2663 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-202ENST00000448238 C11orf21Q9P2W6 132 aa6.24□□□□□ -1.41
NIPBL-202ENST00000448238 HECTD1Q9ULT8 2610 aa6.23□□□□□ -1.41
NIPBL-202ENST00000448238 LINC00167Q96N53 147 aa6.23□□□□□ -1.41
NIPBL-202ENST00000448238 LINC00336Q6ZUF6 198 aa6.22□□□□□ -1.41
NIPBL-202ENST00000448238 IGLV6-57P01721 117 aa6.22□□□□□ -1.41
NIPBL-202ENST00000448238 SPANXA2-OT1Q8N9U9 137 aa6.22□□□□□ -1.41
NIPBL-202ENST00000448238 BRWD1-AS2P59051 145 aa6.22□□□□□ -1.41
NIPBL-202ENST00000448238 COX8CQ7Z4L0 72 aa6.21□□□□□ -1.42
NIPBL-202ENST00000448238 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.42
NIPBL-202ENST00000448238 IGLV1-51P01701 117 aa6.21□□□□□ -1.42
NIPBL-202ENST00000448238 GAS8-AS1O95177 125 aa6.21□□□□□ -1.42
NIPBL-202ENST00000448238 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
NIPBL-202ENST00000448238 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
NIPBL-202ENST00000448238 C1orf229Q6ZS94 237 aaPredicted RBP6.19□□□□□ -1.42
NIPBL-202ENST00000448238 ZNF295-AS1Q8N0V1 137 aa6.19□□□□□ -1.42
NIPBL-202ENST00000448238 ST20-AS1Q8NBB2 130 aa6.19□□□□□ -1.42
NIPBL-202ENST00000448238 C16orf90A8MZG2 172 aa6.18□□□□□ -1.42
NIPBL-202ENST00000448238 FAM104AQ969W3 186 aa6.18□□□□□ -1.42
NIPBL-202ENST00000448238 ODF3L2Q3SX64 289 aa6.18□□□□□ -1.42
NIPBL-202ENST00000448238 IGHV3OR16-9A0A0B4J2B5 98 aa6.18□□□□□ -1.42
NIPBL-202ENST00000448238 J3QL48 77 aa6.17□□□□□ -1.42
NIPBL-202ENST00000448238 LINC00588Q9Y4M8 146 aa6.17□□□□□ -1.42
NIPBL-202ENST00000448238 A0A0D9SG42 100 aa6.17□□□□□ -1.42
NIPBL-202ENST00000448238 IGLV5-48A0A075B6I7 105 aa6.16□□□□□ -1.42
NIPBL-202ENST00000448238 MGAM2Q2M2H8 2515 aa6.16□□□□□ -1.42
NIPBL-202ENST00000448238 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
NIPBL-202ENST00000448238 MAST4O15021 2626 aa6.16□□□□□ -1.42
NIPBL-202ENST00000448238 K7EQZ3 153 aa6.16□□□□□ -1.42
NIPBL-202ENST00000448238 AKAP13Q12802 2813 aa6.16□□□□□ -1.42
NIPBL-202ENST00000448238 BRI3O95415 125 aa6.15□□□□□ -1.42
NIPBL-202ENST00000448238 ZNF580Q9UK33 172 aa6.15□□□□□ -1.43
NIPBL-202ENST00000448238 H3BNG1 76 aa6.15□□□□□ -1.43
NIPBL-202ENST00000448238 RPL37AP61513 92 aaKnown RBP6.15□□□□□ -1.43
NIPBL-202ENST00000448238 C10orf99Q6UWK7 81 aa6.14□□□□□ -1.43
NIPBL-202ENST00000448238 ATRQ13535 2644 aa6.14□□□□□ -1.43
NIPBL-202ENST00000448238 BAHCC1Q9P281 2608 aa6.14□□□□□ -1.43
NIPBL-202ENST00000448238 URB1-AS1Q96HZ7 61 aa6.13□□□□□ -1.43
NIPBL-202ENST00000448238 A0A1B0GVX0 72 aa6.13□□□□□ -1.43
NIPBL-202ENST00000448238 LINC00310P59036 64 aa6.13□□□□□ -1.43
NIPBL-202ENST00000448238 IGLV5-45A0A087WSX0 123 aa6.12□□□□□ -1.43
NIPBL-202ENST00000448238 LINC01546A6NGU7 62 aa6.12□□□□□ -1.43
NIPBL-202ENST00000448238 LTBP2Q14767 1821 aa6.12□□□□□ -1.43
NIPBL-202ENST00000448238 WIPF1O43516 503 aa6.12□□□□□ -1.43
NIPBL-202ENST00000448238 Q8NA96 180 aa6.12□□□□□ -1.43
NIPBL-202ENST00000448238 PRRC2CQ9Y520 2896 aaKnown RBP6.11□□□□□ -1.43
NIPBL-202ENST00000448238 C18orf65Q6ZTR6 163 aa6.11□□□□□ -1.43
NIPBL-202ENST00000448238 PRO0461Q9UI25 63 aa6.1□□□□□ -1.43
NIPBL-202ENST00000448238 FHL3Q13643 280 aa6.1□□□□□ -1.43
NIPBL-202ENST00000448238 H7BZZ5 65 aa6.1□□□□□ -1.43
NIPBL-202ENST00000448238 SMCPP49901 116 aaPredicted RBP6.1□□□□□ -1.43
NIPBL-202ENST00000448238 HRES1P13985 223 aa6.1□□□□□ -1.43
NIPBL-202ENST00000448238 THSD7BQ9C0I4 1608 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms