RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 LRP1BQ9NZR2 4599 aa4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 LINC00587B1AMM8 73 aa4.79□□□□□ -1.64
AC004540.1-206ENST00000448056 XGP55808 180 aa4.79□□□□□ -1.64
AC004540.1-206ENST00000448056 LINC00158P58513 81 aa4.79□□□□□ -1.64
AC004540.1-206ENST00000448056 PYY3Q5JQD4 70 aa4.79□□□□□ -1.64
AC004540.1-206ENST00000448056 SPACA4Q8TDM5 124 aa4.79□□□□□ -1.64
AC004540.1-206ENST00000448056 TTTY13Q9BZ97 58 aa4.79□□□□□ -1.64
AC004540.1-206ENST00000448056 A0A087WYN8 130 aa4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 A0A0J9YXY3 114 aa4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 ZNF815PA8K554 130 aa4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 CDK2AP2O75956 126 aa4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 SMIM13P0DJ93 91 aa4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 C9orf129Q5T035 196 aaKnown RBP4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 PCP2Q8IVA1 136 aa4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 CIRBP-AS1Q8TBR5 109 aa4.78□□□□□ -1.64
AC004540.1-206ENST00000448056 A0A0U1RRA0 63 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 LOC105371267A0A1B0GV96 52 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 A0A1W2PNN7 141 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 EPM2AB3EWF7 344 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 HAMPP81172 84 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 MEIG1Q5JSS6 88 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 SCXQ7RTU7 201 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 KRTAP17-1Q9BYP8 105 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 SND1-IT1Q9HBX3 110 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 XAGE1AQ9HD64 81 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 PLAC8Q9NZF1 115 aa4.77□□□□□ -1.65
AC004540.1-206ENST00000448056 DNAH8Q96JB1 4490 aa4.76□□□□□ -1.65
AC004540.1-206ENST00000448056 FAM168BA1KXE4 195 aa4.76□□□□□ -1.65
AC004540.1-206ENST00000448056 ADAMTSL4-AS1Q5T5F5 129 aa4.76□□□□□ -1.65
AC004540.1-206ENST00000448056 MIR7-3HGQ8N6C7 128 aa4.76□□□□□ -1.65
AC004540.1-206ENST00000448056 VAMP8Q9BV40 100 aa4.76□□□□□ -1.65
AC004540.1-206ENST00000448056 PAM16Q9Y3D7 125 aa4.76□□□□□ -1.65
AC004540.1-206ENST00000448056 TIMM17BO60830 172 aa4.75□□□□□ -1.65
AC004540.1-206ENST00000448056 COX8AP10176 69 aa4.75□□□□□ -1.65
AC004540.1-206ENST00000448056 SPATA45Q537H7 98 aa4.75□□□□□ -1.65
AC004540.1-206ENST00000448056 SCGB1D4Q6XE38 83 aa4.75□□□□□ -1.65
AC004540.1-206ENST00000448056 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
AC004540.1-206ENST00000448056 DAND5Q8N907 189 aa4.75□□□□□ -1.65
AC004540.1-206ENST00000448056 LITAFQ99732 161 aa4.75□□□□□ -1.65
AC004540.1-206ENST00000448056 LOC107984156A0A0G2JMH3 177 aa4.74□□□□□ -1.65
AC004540.1-206ENST00000448056 DLEU1O43261 78 aa4.74□□□□□ -1.65
AC004540.1-206ENST00000448056 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
AC004540.1-206ENST00000448056 ARL17AQ8IVW1 177 aa4.74□□□□□ -1.65
AC004540.1-206ENST00000448056 BOD1L2Q8IYS8 172 aa4.74□□□□□ -1.65
AC004540.1-206ENST00000448056 C14orf144Q96I85 54 aa4.74□□□□□ -1.65
AC004540.1-206ENST00000448056 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
AC004540.1-206ENST00000448056 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
AC004540.1-206ENST00000448056 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
AC004540.1-206ENST00000448056 FAM19A5Q7Z5A7 132 aaPredicted RBP4.73□□□□□ -1.65
AC004540.1-206ENST00000448056 C22orf24Q9Y442 160 aa4.73□□□□□ -1.65
AC004540.1-206ENST00000448056 KIAA1109Q2LD37 5005 aa4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 IGLV5-37A0A075B6J1 123 aa4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 TMEM238C9JI98 176 aa4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 VPREB1P12018 145 aa4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 S100A12P80511 92 aa4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 RPL24P83731 157 aaKnown RBP4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 Q8NDZ9 215 aa4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 LINC00308Q8TCZ7 52 aa4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 TP73-AS1Q9UF72 201 aa4.72□□□□□ -1.65
AC004540.1-206ENST00000448056 M0QXV9 152 aa4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 SMIM6P0DI80 62 aa4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 NPC2P61916 151 aa4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 PRR3P79522 188 aaKnown RBP4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 LBHQ53QV2 105 aaPredicted RBP4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 SLC25A34Q6PIV7 304 aa4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 SOSTDC1Q6X4U4 206 aa4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 Q6ZVH6 145 aa4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 PHF5AQ7RTV0 110 aaKnown RBP4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 SPANXDQ9BXN6 97 aa4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 SPANXCQ9NY87 97 aa4.71□□□□□ -1.66
AC004540.1-206ENST00000448056 HSPG2P98160 4391 aa4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 RYR1P21817 5038 aa4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 IFITM1P13164 125 aa4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 MRPL55Q7Z7F7 128 aaKnown RBP4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 NKAPP1Q8N9T2 125 aa4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 C7orf33Q8WU49 177 aa4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 LINC00167Q96N53 147 aa4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 MIEN1Q9BRT3 115 aa4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 SPANXB1Q9NS25 103 aaPredicted RBP4.7□□□□□ -1.66
AC004540.1-206ENST00000448056 M0R378 163 aa4.69□□□□□ -1.66
AC004540.1-206ENST00000448056 NDUFC2O95298 119 aa4.69□□□□□ -1.66
AC004540.1-206ENST00000448056 MUSTN1Q8IVN3 82 aa4.69□□□□□ -1.66
AC004540.1-206ENST00000448056 Q8N1X5 172 aa4.69□□□□□ -1.66
AC004540.1-206ENST00000448056 COPS9Q8WXC6 57 aa4.69□□□□□ -1.66
AC004540.1-206ENST00000448056 PPDPFQ9H3Y8 114 aa4.69□□□□□ -1.66
AC004540.1-206ENST00000448056 HIGD1BQ9P298 99 aa4.69□□□□□ -1.66
AC004540.1-206ENST00000448056 HERC2O95714 4834 aa4.69□□□□□ -1.66
AC004540.1-206ENST00000448056 GAGE10A6NGK3 116 aa4.68□□□□□ -1.66
AC004540.1-206ENST00000448056 RPL37AP8A6NKH3 93 aa4.68□□□□□ -1.66
AC004540.1-206ENST00000448056 UBE2BP63146 152 aa4.68□□□□□ -1.66
AC004540.1-206ENST00000448056 C2orf91Q6ZV80 131 aa4.68□□□□□ -1.66
AC004540.1-206ENST00000448056 KRTAP11-1Q8IUC1 163 aa4.68□□□□□ -1.66
AC004540.1-206ENST00000448056 HIST1H4GQ99525 98 aa4.68□□□□□ -1.66
AC004540.1-206ENST00000448056 UQCR10Q9UDW1 63 aa4.68□□□□□ -1.66
AC004540.1-206ENST00000448056 IGLV1-50A0A075B6I6 118 aa4.67□□□□□ -1.66
AC004540.1-206ENST00000448056 IGKV2-28A0A075B6P5 120 aa4.67□□□□□ -1.66
AC004540.1-206ENST00000448056 TRBV10-2A0A0K0K1G8 114 aa4.67□□□□□ -1.66
AC004540.1-206ENST00000448056 NCR3O14931 201 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms