RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 KLK9Q2XQG4 91 aa12.23□□□□□ -0.45
ATG9A-215ENST00000446716 Q8N3U1 123 aa12.23□□□□□ -0.45
ATG9A-215ENST00000446716 RETNLBQ9BQ08 111 aa12.23□□□□□ -0.45
ATG9A-215ENST00000446716 DEFB116Q30KQ4 102 aa12.22□□□□□ -0.45
ATG9A-215ENST00000446716 LINC00208Q96KT6 92 aa12.22□□□□□ -0.45
ATG9A-215ENST00000446716 FAM240AA0A1B0GVK7 77 aa12.21□□□□□ -0.45
ATG9A-215ENST00000446716 SPTSSBQ8NFR3 76 aa12.21□□□□□ -0.45
ATG9A-215ENST00000446716 HELZ2Q9BYK8 2649 aaKnown RBP12.21□□□□□ -0.46
ATG9A-215ENST00000446716 XGP55808 180 aa12.2□□□□□ -0.46
ATG9A-215ENST00000446716 K7EIL1 84 aa12.2□□□□□ -0.46
ATG9A-215ENST00000446716 V9GYY9 64 aa12.19□□□□□ -0.46
ATG9A-215ENST00000446716 ATP5EP56381 51 aaPredicted RBP12.19□□□□□ -0.46
ATG9A-215ENST00000446716 BRK1Q8WUW1 75 aa12.18□□□□□ -0.46
ATG9A-215ENST00000446716 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
ATG9A-215ENST00000446716 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
ATG9A-215ENST00000446716 SPACA4Q8TDM5 124 aa12.16□□□□□ -0.46
ATG9A-215ENST00000446716 MOBPQ13875 183 aa12.16□□□□□ -0.46
ATG9A-215ENST00000446716 PHF5AQ7RTV0 110 aaKnown RBP12.16□□□□□ -0.46
ATG9A-215ENST00000446716 KRTAP10-11P60412 298 aa12.15□□□□□ -0.46
ATG9A-215ENST00000446716 KIAA0087Q14695 138 aa12.15□□□□□ -0.46
ATG9A-215ENST00000446716 COX7CP15954 63 aa12.14□□□□□ -0.47
ATG9A-215ENST00000446716 Q6Q795 121 aa12.14□□□□□ -0.47
ATG9A-215ENST00000446716 A0A087WVE0 104 aa12.14□□□□□ -0.47
ATG9A-215ENST00000446716 Q6ZRP5 223 aa12.14□□□□□ -0.47
ATG9A-215ENST00000446716 SPATA3Q8NHX4 192 aa12.13□□□□□ -0.47
ATG9A-215ENST00000446716 DNAH10OSP0CZ25 163 aa12.12□□□□□ -0.47
ATG9A-215ENST00000446716 CRYGAP11844 174 aa12.11□□□□□ -0.47
ATG9A-215ENST00000446716 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
ATG9A-215ENST00000446716 GVQW2A0A096LPI5 108 aaPredicted RBP12.09□□□□□ -0.47
ATG9A-215ENST00000446716 CSNK1G2-AS1Q8NCQ2 148 aa12.09□□□□□ -0.47
ATG9A-215ENST00000446716 PCOTHQ58A44 107 aa12.08□□□□□ -0.48
ATG9A-215ENST00000446716 CHTF8P0CG12 524 aa12.08□□□□□ -0.48
ATG9A-215ENST00000446716 DNAH12Q6ZR08 3092 aa12.08□□□□□ -0.48
ATG9A-215ENST00000446716 KRTAP10-3P60369 221 aa12.08□□□□□ -0.48
ATG9A-215ENST00000446716 C19orf73Q9NVV2 129 aa12.08□□□□□ -0.48
ATG9A-215ENST00000446716 FLNAP21333 2647 aaKnown RBP12.07□□□□□ -0.48
ATG9A-215ENST00000446716 HCG22E2RYF7 251 aa12.07□□□□□ -0.48
ATG9A-215ENST00000446716 TRBV7-6A0A0J9YX20 115 aa12.06□□□□□ -0.48
ATG9A-215ENST00000446716 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
ATG9A-215ENST00000446716 TYMSOSQ8TAI1 123 aa12.04□□□□□ -0.48
ATG9A-215ENST00000446716 LINC00846Q9NV44 126 aa12.04□□□□□ -0.48
ATG9A-215ENST00000446716 H0Y9P7 68 aa12.04□□□□□ -0.48
ATG9A-215ENST00000446716 SPINK1P00995 79 aa12.04□□□□□ -0.48
ATG9A-215ENST00000446716 UTRNP46939 3433 aa12.04□□□□□ -0.48
ATG9A-215ENST00000446716 KRTAP1-3Q8IUG1 177 aa12.04□□□□□ -0.48
ATG9A-215ENST00000446716 A6NED7 52 aa12.04□□□□□ -0.48
ATG9A-215ENST00000446716 SOSTDC1Q6X4U4 206 aa12.03□□□□□ -0.48
ATG9A-215ENST00000446716 Q6ZRX8 168 aa12.03□□□□□ -0.48
ATG9A-215ENST00000446716 ELOF1P60002 83 aaKnown RBP12.03□□□□□ -0.48
ATG9A-215ENST00000446716 ITPR3Q14573 2671 aa12.02□□□□□ -0.48
ATG9A-215ENST00000446716 PLA2G1BP04054 148 aaKnown RBP12.02□□□□□ -0.49
ATG9A-215ENST00000446716 IGKV2D-30A0A075B6S6 120 aa12.01□□□□□ -0.49
ATG9A-215ENST00000446716 IGKV2-30P06310 120 aa12.01□□□□□ -0.49
ATG9A-215ENST00000446716 CCDC179H3BU77 68 aa12□□□□□ -0.49
ATG9A-215ENST00000446716 Q8NBF4 154 aa12□□□□□ -0.49
ATG9A-215ENST00000446716 CFAP46Q8IYW2 2715 aa12□□□□□ -0.49
ATG9A-215ENST00000446716 CEP350Q5VT06 3117 aa11.99□□□□□ -0.49
ATG9A-215ENST00000446716 J3QL48 77 aa11.98□□□□□ -0.49
ATG9A-215ENST00000446716 BCE1O60756 84 aa11.98□□□□□ -0.49
ATG9A-215ENST00000446716 KRTAP1-1Q07627 177 aa11.97□□□□□ -0.49
ATG9A-215ENST00000446716 RPL37AP61513 92 aaKnown RBP11.96□□□□□ -0.49
ATG9A-215ENST00000446716 BPTFQ12830 3046 aa11.95□□□□□ -0.5
ATG9A-215ENST00000446716 LINC00476Q8WZB0 136 aa11.95□□□□□ -0.5
ATG9A-215ENST00000446716 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
ATG9A-215ENST00000446716 CENPEQ02224 2701 aa11.94□□□□□ -0.5
ATG9A-215ENST00000446716 GIG44P09565 113 aaPredicted RBP11.94□□□□□ -0.5
ATG9A-215ENST00000446716 ST20-AS1Q8NBB2 130 aa11.94□□□□□ -0.5
ATG9A-215ENST00000446716 TM2D3Q9BRN9 247 aa11.94□□□□□ -0.5
ATG9A-215ENST00000446716 CXCL6P80162 114 aa11.93□□□□□ -0.5
ATG9A-215ENST00000446716 FAM218AQ96MZ4 157 aa11.92□□□□□ -0.5
ATG9A-215ENST00000446716 FAM168BA1KXE4 195 aa11.91□□□□□ -0.5
ATG9A-215ENST00000446716 VPREB1P12018 145 aa11.91□□□□□ -0.5
ATG9A-215ENST00000446716 TMEM254Q8TBM7 123 aa11.9□□□□□ -0.5
ATG9A-215ENST00000446716 hDV103S1A0JD37 113 aa11.9□□□□□ -0.51
ATG9A-215ENST00000446716 C1orf64Q8NEQ6 169 aa11.9□□□□□ -0.51
ATG9A-215ENST00000446716 SMIM26A0A096LP01 95 aa11.89□□□□□ -0.51
ATG9A-215ENST00000446716 A0A1B0GW54 56 aa11.88□□□□□ -0.51
ATG9A-215ENST00000446716 PRR34Q9NV39 138 aa11.86□□□□□ -0.51
ATG9A-215ENST00000446716 SMIM29Q86T20 159 aa11.86□□□□□ -0.51
ATG9A-215ENST00000446716 A0A087WTM6 91 aa11.85□□□□□ -0.51
ATG9A-215ENST00000446716 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
ATG9A-215ENST00000446716 TP53AIP1Q9HCN2 124 aa11.85□□□□□ -0.51
ATG9A-215ENST00000446716 LINC00612Q8N6U2 182 aa11.85□□□□□ -0.51
ATG9A-215ENST00000446716 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
ATG9A-215ENST00000446716 A0A0U1RQV1 116 aa11.84□□□□□ -0.51
ATG9A-215ENST00000446716 LINC00313P59037 77 aa11.84□□□□□ -0.51
ATG9A-215ENST00000446716 C1orf195Q5TG92 126 aa11.83□□□□□ -0.52
ATG9A-215ENST00000446716 CHD7Q9P2D1 2997 aa11.82□□□□□ -0.52
ATG9A-215ENST00000446716 IGLV6-57P01721 117 aa11.82□□□□□ -0.52
ATG9A-215ENST00000446716 C7orf65Q6ZTY9 151 aa11.82□□□□□ -0.52
ATG9A-215ENST00000446716 IGLV1-50A0A075B6I6 118 aa11.8□□□□□ -0.52
ATG9A-215ENST00000446716 C15orf56Q8N910 161 aa11.8□□□□□ -0.52
ATG9A-215ENST00000446716 Q6ZQT0 140 aa11.8□□□□□ -0.52
ATG9A-215ENST00000446716 SMR3BP02814 79 aaPredicted RBP11.78□□□□□ -0.52
ATG9A-215ENST00000446716 TEP1Q99973 2627 aaKnown RBP11.78□□□□□ -0.52
ATG9A-215ENST00000446716 LINC00336Q6ZUF6 198 aa11.78□□□□□ -0.52
ATG9A-215ENST00000446716 C9orf163Q8N9P6 203 aa11.78□□□□□ -0.52
ATG9A-215ENST00000446716 LITAFQ99732 161 aa11.78□□□□□ -0.52
ATG9A-215ENST00000446716 APLNQ9ULZ1 77 aa11.78□□□□□ -0.52
ATG9A-215ENST00000446716 LOC110117498A0A087WWA1 95 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms