RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 C16orf95Q9H693 158 aa3.53□□□□□ -1.84
SCN11A-202ENST00000444237 MED13LQ71F56 2210 aa3.53□□□□□ -1.84
SCN11A-202ENST00000444237 UQCR11O14957 56 aa3.53□□□□□ -1.84
SCN11A-202ENST00000444237 BDP1A6H8Y1 2624 aa3.53□□□□□ -1.84
SCN11A-202ENST00000444237 IGLV6-57P01721 117 aa3.53□□□□□ -1.85
SCN11A-202ENST00000444237 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.85
SCN11A-202ENST00000444237 PCSK5Q92824 1860 aa3.52□□□□□ -1.85
SCN11A-202ENST00000444237 DEFB135Q30KP9 77 aa3.52□□□□□ -1.85
SCN11A-202ENST00000444237 PCNX1Q96RV3 2341 aa3.52□□□□□ -1.85
SCN11A-202ENST00000444237 K7EQZ3 153 aa3.52□□□□□ -1.85
SCN11A-202ENST00000444237 KLK9Q2XQG4 91 aa3.52□□□□□ -1.85
SCN11A-202ENST00000444237 C11orf45Q8TAV5 145 aa3.52□□□□□ -1.85
SCN11A-202ENST00000444237 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
SCN11A-202ENST00000444237 C2CD3Q4AC94 2353 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 RAI1Q7Z5J4 1906 aaPredicted RBP3.51□□□□□ -1.85
SCN11A-202ENST00000444237 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 IGHV6-1A0A0B4J1U7 121 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 C16orf90A8MZG2 172 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 AVPP01185 164 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 PTPRQQ9UMZ3 2332 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 DEFB4AO15263 64 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 Q5VV11 94 aa3.51□□□□□ -1.85
SCN11A-202ENST00000444237 PIEZO1Q92508 2521 aa3.5□□□□□ -1.85
SCN11A-202ENST00000444237 IGKV2-24A0A0C4DH68 120 aa3.5□□□□□ -1.85
SCN11A-202ENST00000444237 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
SCN11A-202ENST00000444237 NCOR2Q9Y618 2525 aa3.5□□□□□ -1.85
SCN11A-202ENST00000444237 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
SCN11A-202ENST00000444237 ZNF702PQ9H963 129 aa3.5□□□□□ -1.85
SCN11A-202ENST00000444237 BRCA2P51587 3418 aa3.5□□□□□ -1.85
SCN11A-202ENST00000444237 C10orf99Q6UWK7 81 aa3.49□□□□□ -1.85
SCN11A-202ENST00000444237 Q8N9P0 234 aaPredicted RBP3.49□□□□□ -1.85
SCN11A-202ENST00000444237 MKI67P46013 3256 aaKnown RBP3.49□□□□□ -1.85
SCN11A-202ENST00000444237 A0A1W2PPR1 153 aa3.49□□□□□ -1.85
SCN11A-202ENST00000444237 Q6YL49 198 aa3.49□□□□□ -1.85
SCN11A-202ENST00000444237 IGF2RP11717 2491 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 GVQW2A0A096LPI5 108 aaPredicted RBP3.48□□□□□ -1.85
SCN11A-202ENST00000444237 MOBPQ13875 183 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 CHD7Q9P2D1 2997 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 WNK1Q9H4A3 2382 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 A8MWP4 228 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 LINC00476Q8WZB0 136 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 LINC00313P59037 77 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 SPINK6Q6UWN8 80 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 Q6ZRX8 168 aa3.48□□□□□ -1.85
SCN11A-202ENST00000444237 ST20-AS1Q8NBB2 130 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 KCNQ1DNQ9H478 68 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 M0R2N4 97 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 ZNF575Q86XF7 245 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 LINC00528Q8N1L1 170 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 C7orf33Q8WU49 177 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 LINC01558Q9Y6Z2 57 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 CHD9Q3L8U1 2897 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 ANKHD1Q8IWZ3 2542 aaKnown RBP3.47□□□□□ -1.85
SCN11A-202ENST00000444237 C5orf42Q9H799 3197 aa3.47□□□□□ -1.85
SCN11A-202ENST00000444237 FAM208BQ5VWN6 2430 aa3.46□□□□□ -1.85
SCN11A-202ENST00000444237 ASB16-AS1Q495Z4 193 aa3.46□□□□□ -1.86
SCN11A-202ENST00000444237 IGLV9-49A0A0B4J1Y8 123 aa3.46□□□□□ -1.86
SCN11A-202ENST00000444237 C22orf24Q9Y442 160 aa3.45□□□□□ -1.86
SCN11A-202ENST00000444237 NBASA2RRP1 2371 aa3.45□□□□□ -1.86
SCN11A-202ENST00000444237 TNRC18O15417 2968 aaPredicted RBP3.45□□□□□ -1.86
SCN11A-202ENST00000444237 ACACBO00763 2458 aa3.45□□□□□ -1.86
SCN11A-202ENST00000444237 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
SCN11A-202ENST00000444237 SPINK1P00995 79 aa3.44□□□□□ -1.86
SCN11A-202ENST00000444237 RPL37AP61513 92 aaKnown RBP3.44□□□□□ -1.86
SCN11A-202ENST00000444237 C18orf65Q6ZTR6 163 aa3.44□□□□□ -1.86
SCN11A-202ENST00000444237 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
SCN11A-202ENST00000444237 SSBP3-AS1Q7Z2R9 100 aa3.43□□□□□ -1.86
SCN11A-202ENST00000444237 DEFB131BA0A096LNP1 70 aa3.43□□□□□ -1.86
SCN11A-202ENST00000444237 MUC4Q99102 2169 aa3.42□□□□□ -1.86
SCN11A-202ENST00000444237 C1orf134Q5TEV5 83 aa3.42□□□□□ -1.86
SCN11A-202ENST00000444237 IGLV5-48A0A075B6I7 105 aa3.42□□□□□ -1.86
SCN11A-202ENST00000444237 Q8N377 158 aa3.42□□□□□ -1.86
SCN11A-202ENST00000444237 RANBP2P49792 3224 aaKnown RBP3.42□□□□□ -1.86
SCN11A-202ENST00000444237 LAMA3Q16787 3333 aa3.42□□□□□ -1.86
SCN11A-202ENST00000444237 CACNA1AO00555 2505 aa3.42□□□□□ -1.86
SCN11A-202ENST00000444237 A6NN06 94 aa3.41□□□□□ -1.86
SCN11A-202ENST00000444237 MRPL34Q9BQ48 92 aaKnown RBP3.41□□□□□ -1.86
SCN11A-202ENST00000444237 PRLHP81277 87 aa3.41□□□□□ -1.86
SCN11A-202ENST00000444237 A0A096LNT2 108 aa3.41□□□□□ -1.86
SCN11A-202ENST00000444237 A0A1W2PNM2 257 aa3.41□□□□□ -1.86
SCN11A-202ENST00000444237 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
SCN11A-202ENST00000444237 PLA2G2DQ9UNK4 145 aa3.41□□□□□ -1.86
SCN11A-202ENST00000444237 TRANK1O15050 2925 aa3.41□□□□□ -1.86
SCN11A-202ENST00000444237 PIEZO2Q9H5I5 2752 aa3.41□□□□□ -1.86
SCN11A-202ENST00000444237 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.86
SCN11A-202ENST00000444237 IGLV1-51P01701 117 aa3.4□□□□□ -1.86
SCN11A-202ENST00000444237 LY6G6CO95867 125 aa3.4□□□□□ -1.87
SCN11A-202ENST00000444237 IGFL1Q6UW32 110 aa3.39□□□□□ -1.87
SCN11A-202ENST00000444237 ATRXP46100 2492 aa3.39□□□□□ -1.87
SCN11A-202ENST00000444237 DSCR10P59022 87 aa3.39□□□□□ -1.87
SCN11A-202ENST00000444237 COL27A1Q8IZC6 1860 aaPredicted RBP3.39□□□□□ -1.87
SCN11A-202ENST00000444237 SPTBN4Q9H254 2564 aa3.39□□□□□ -1.87
SCN11A-202ENST00000444237 CSAG1Q6PB30 78 aa3.39□□□□□ -1.87
SCN11A-202ENST00000444237 C8orf17Q9NRJ1 99 aa3.39□□□□□ -1.87
SCN11A-202ENST00000444237 CDH23Q9H251 3354 aa3.38□□□□□ -1.87
SCN11A-202ENST00000444237 KRTAP24-1Q3LI83 254 aa3.38□□□□□ -1.87
SCN11A-202ENST00000444237 WDR87Q6ZQQ6 2873 aa3.38□□□□□ -1.87
SCN11A-202ENST00000444237 IGKV2D-30A0A075B6S6 120 aa3.38□□□□□ -1.87
SCN11A-202ENST00000444237 IGKV2-30P06310 120 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms