RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 Q8NBF4 154 aa11.5□□□□□ -0.57
TMEM50B-204ENST00000442441 DAND5Q8N907 189 aa11.49□□□□□ -0.57
TMEM50B-204ENST00000442441 ZNF706Q9Y5V0 76 aaPredicted RBP11.48□□□□□ -0.57
TMEM50B-204ENST00000442441 LINC01546A6NGU7 62 aa11.47□□□□□ -0.57
TMEM50B-204ENST00000442441 SPINK1P00995 79 aa11.46□□□□□ -0.57
TMEM50B-204ENST00000442441 IGLC3P0DOY3 106 aa11.45□□□□□ -0.58
TMEM50B-204ENST00000442441 ZNF625Q96I27 306 aaPredicted RBP11.45□□□□□ -0.58
TMEM50B-204ENST00000442441 ZNF22P17026 224 aaPredicted RBP11.42□□□□□ -0.58
TMEM50B-204ENST00000442441 NDUFA12Q9UI09 145 aa11.41□□□□□ -0.58
TMEM50B-204ENST00000442441 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
TMEM50B-204ENST00000442441 A0A1B0GVG6 124 aa11.38□□□□□ -0.59
TMEM50B-204ENST00000442441 NDUFA6P56556 154 aa11.38□□□□□ -0.59
TMEM50B-204ENST00000442441 FA2HQ7L5A8 372 aa11.38□□□□□ -0.59
TMEM50B-204ENST00000442441 SMCR5Q8TEV8 140 aa11.38□□□□□ -0.59
TMEM50B-204ENST00000442441 LCE2CQ5TA81 110 aa11.37□□□□□ -0.59
TMEM50B-204ENST00000442441 SMCO4Q9NRQ5 59 aa11.37□□□□□ -0.59
TMEM50B-204ENST00000442441 PRYO14603 147 aa11.36□□□□□ -0.59
TMEM50B-204ENST00000442441 LINC00158P58513 81 aa11.36□□□□□ -0.59
TMEM50B-204ENST00000442441 XP32Q5T750 250 aa11.36□□□□□ -0.59
TMEM50B-204ENST00000442441 FAM19A2Q8N3H0 131 aa11.36□□□□□ -0.59
TMEM50B-204ENST00000442441 TRAV9-1A0A075B6T8 112 aa11.35□□□□□ -0.59
TMEM50B-204ENST00000442441 RPS29P62273 56 aaKnown RBP11.35□□□□□ -0.59
TMEM50B-204ENST00000442441 LINC00483Q53H64 154 aa11.35□□□□□ -0.59
TMEM50B-204ENST00000442441 Q8N377 158 aa11.35□□□□□ -0.59
TMEM50B-204ENST00000442441 SPRR1AP35321 89 aa11.34□□□□□ -0.59
TMEM50B-204ENST00000442441 KCNQ1DNQ9H478 68 aa11.32□□□□□ -0.6
TMEM50B-204ENST00000442441 A0A096LNJ9 63 aa11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 ETDCA0A1B0GVM5 59 aa11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 C11orf86A6NJI1 115 aa11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 KRTAP4-16G5E9R7 235 aaPredicted RBP11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 SLC25A20O43772 301 aa11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 MOBPQ13875 183 aa11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 GAGE2AQ6NT46 116 aa11.31□□□□□ -0.6
TMEM50B-204ENST00000442441 IGLV9-49A0A0B4J1Y8 123 aa11.3□□□□□ -0.6
TMEM50B-204ENST00000442441 SSBP3-AS1Q7Z2R9 100 aa11.3□□□□□ -0.6
TMEM50B-204ENST00000442441 BOD1L2Q8IYS8 172 aa11.29□□□□□ -0.6
TMEM50B-204ENST00000442441 NCR3O14931 201 aa11.28□□□□□ -0.6
TMEM50B-204ENST00000442441 KRTAP19-2Q3LHN2 52 aa11.28□□□□□ -0.6
TMEM50B-204ENST00000442441 BAGE3Q86Y29 109 aa11.27□□□□□ -0.61
TMEM50B-204ENST00000442441 ATP6V1G1O75348 118 aa11.26□□□□□ -0.61
TMEM50B-204ENST00000442441 MT1HP80294 61 aa11.26□□□□□ -0.61
TMEM50B-204ENST00000442441 FABP9Q0Z7S8 132 aa11.26□□□□□ -0.61
TMEM50B-204ENST00000442441 SMIM13P0DJ93 91 aa11.25□□□□□ -0.61
TMEM50B-204ENST00000442441 S100PP25815 95 aa11.25□□□□□ -0.61
TMEM50B-204ENST00000442441 COX19Q49B96 90 aa11.25□□□□□ -0.61
TMEM50B-204ENST00000442441 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
TMEM50B-204ENST00000442441 HBDP02042 147 aa11.24□□□□□ -0.61
TMEM50B-204ENST00000442441 CFC1BP0CG36 223 aa11.24□□□□□ -0.61
TMEM50B-204ENST00000442441 ERC2-IT1O76042 136 aa11.23□□□□□ -0.61
TMEM50B-204ENST00000442441 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
TMEM50B-204ENST00000442441 B5MCH6 92 aa11.22□□□□□ -0.61
TMEM50B-204ENST00000442441 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
TMEM50B-204ENST00000442441 LINC00614P0C842 121 aa11.21□□□□□ -0.61
TMEM50B-204ENST00000442441 S100A12P80511 92 aa11.21□□□□□ -0.61
TMEM50B-204ENST00000442441 PMCHL1Q16048 86 aa11.21□□□□□ -0.61
TMEM50B-204ENST00000442441 TMEM223A0PJW6 202 aa11.2□□□□□ -0.62
TMEM50B-204ENST00000442441 MEIG1Q5JSS6 88 aa11.2□□□□□ -0.62
TMEM50B-204ENST00000442441 CHTOPQ9Y3Y2 248 aaKnown RBP11.2□□□□□ -0.62
TMEM50B-204ENST00000442441 C18orf32Q8TCD1 76 aa11.18□□□□□ -0.62
TMEM50B-204ENST00000442441 Q9BRP9 147 aa11.18□□□□□ -0.62
TMEM50B-204ENST00000442441 SEC11CQ9BY50 192 aa11.18□□□□□ -0.62
TMEM50B-204ENST00000442441 PCOTHQ58A44 107 aa11.17□□□□□ -0.62
TMEM50B-204ENST00000442441 TMEM218A2RU14 115 aa11.16□□□□□ -0.62
TMEM50B-204ENST00000442441 HERV-K104P63124 156 aa11.16□□□□□ -0.62
TMEM50B-204ENST00000442441 IGLV8-61A0A075B6I0 122 aa11.15□□□□□ -0.62
TMEM50B-204ENST00000442441 LORP23490 312 aaPredicted RBP11.15□□□□□ -0.62
TMEM50B-204ENST00000442441 C9orf153Q5TBE3 101 aa11.15□□□□□ -0.62
TMEM50B-204ENST00000442441 Q6ZRX8 168 aa11.15□□□□□ -0.62
TMEM50B-204ENST00000442441 LINC00587B1AMM8 73 aa11.14□□□□□ -0.63
TMEM50B-204ENST00000442441 DDTP30046 118 aa11.13□□□□□ -0.63
TMEM50B-204ENST00000442441 UQCC3Q6UW78 93 aa11.13□□□□□ -0.63
TMEM50B-204ENST00000442441 KRTAP10-6P60371 365 aaPredicted RBP11.12□□□□□ -0.63
TMEM50B-204ENST00000442441 CLLU1Q5K131 121 aa11.12□□□□□ -0.63
TMEM50B-204ENST00000442441 MAP1LC3CQ9BXW4 147 aa11.12□□□□□ -0.63
TMEM50B-204ENST00000442441 TRAV12-1A0A0B4J245 112 aa11.1□□□□□ -0.63
TMEM50B-204ENST00000442441 TRBV10-2A0A0K0K1G8 114 aa11.1□□□□□ -0.63
TMEM50B-204ENST00000442441 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
TMEM50B-204ENST00000442441 LOC107984156A0A0G2JMH3 177 aa11.08□□□□□ -0.64
TMEM50B-204ENST00000442441 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.64
TMEM50B-204ENST00000442441 ARL17AQ8IVW1 177 aa11.08□□□□□ -0.64
TMEM50B-204ENST00000442441 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
TMEM50B-204ENST00000442441 JOSD1Q15040 202 aaPredicted RBP11.06□□□□□ -0.64
TMEM50B-204ENST00000442441 IFI27L1Q96BM0 104 aa11.06□□□□□ -0.64
TMEM50B-204ENST00000442441 ST20-AS1Q8NBB2 130 aa11.04□□□□□ -0.64
TMEM50B-204ENST00000442441 LIMD2Q9BT23 127 aa11.04□□□□□ -0.64
TMEM50B-204ENST00000442441 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
TMEM50B-204ENST00000442441 IGLV6-57P01721 117 aa11.03□□□□□ -0.64
TMEM50B-204ENST00000442441 S100A7L2Q5SY68 101 aa11.03□□□□□ -0.64
TMEM50B-204ENST00000442441 RPS10P5Q9NQ39 176 aa11.03□□□□□ -0.64
TMEM50B-204ENST00000442441 M0R2T5 61 aa11.02□□□□□ -0.65
TMEM50B-204ENST00000442441 TRAV23DV6A0A075B6W5 121 aa11.01□□□□□ -0.65
TMEM50B-204ENST00000442441 RHEBQ15382 184 aa11.01□□□□□ -0.65
TMEM50B-204ENST00000442441 C5orf52A6NGY3 159 aa11□□□□□ -0.65
TMEM50B-204ENST00000442441 HRCT1Q6UXD1 115 aa11□□□□□ -0.65
TMEM50B-204ENST00000442441 TSPEAR-AS2P59090 65 aa10.99□□□□□ -0.65
TMEM50B-204ENST00000442441 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
TMEM50B-204ENST00000442441 ZNF73O43830 326 aaPredicted RBP10.98□□□□□ -0.65
TMEM50B-204ENST00000442441 NDUFC2O95298 119 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms