RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 LINC00476Q8WZB0 136 aa6.21□□□□□ -1.42
HDAC6-209ENST00000440653 RETNQ9HD89 108 aa6.21□□□□□ -1.42
HDAC6-209ENST00000440653 GVQW2A0A096LPI5 108 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-209ENST00000440653 LY6G6CO95867 125 aa6.2□□□□□ -1.42
HDAC6-209ENST00000440653 CCL18P55774 89 aa6.2□□□□□ -1.42
HDAC6-209ENST00000440653 KIAA0087Q14695 138 aa6.2□□□□□ -1.42
HDAC6-209ENST00000440653 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
HDAC6-209ENST00000440653 GAGE12HA6NDE8 117 aa6.19□□□□□ -1.42
HDAC6-209ENST00000440653 F8WDY8 70 aa6.19□□□□□ -1.42
HDAC6-209ENST00000440653 PFN2P35080 140 aa6.19□□□□□ -1.42
HDAC6-209ENST00000440653 C2orf82Q6UX34 121 aa6.19□□□□□ -1.42
HDAC6-209ENST00000440653 C11orf45Q8TAV5 145 aa6.19□□□□□ -1.42
HDAC6-209ENST00000440653 IGLV10-54A0A075B6I4 117 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 DEFB131BA0A096LNP1 70 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 TRAV10A0A0B4J240 114 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 A0A0J9YWU9 116 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 H0YGX0 51 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 LINC01556Q5JQF7 62 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 LINC00337Q8N6G1 96 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 TM2D3Q9BRN9 247 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 KLK12Q9UKR0 248 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 FAT2Q9NYQ8 4349 aa6.18□□□□□ -1.42
HDAC6-209ENST00000440653 CLEC2BQ92478 149 aa6.17□□□□□ -1.42
HDAC6-209ENST00000440653 DNAH2Q9P225 4427 aa6.17□□□□□ -1.42
HDAC6-209ENST00000440653 FAM240AA0A1B0GVK7 77 aa6.16□□□□□ -1.42
HDAC6-209ENST00000440653 A0A1B0GX51 115 aa6.16□□□□□ -1.42
HDAC6-209ENST00000440653 DNAL4O96015 105 aa6.16□□□□□ -1.42
HDAC6-209ENST00000440653 SCGB1A1P11684 91 aa6.16□□□□□ -1.42
HDAC6-209ENST00000440653 ENHOQ6UWT2 76 aa6.16□□□□□ -1.42
HDAC6-209ENST00000440653 Q8N3U1 123 aa6.16□□□□□ -1.42
HDAC6-209ENST00000440653 WFDC10BQ8IUB3 73 aa6.15□□□□□ -1.42
HDAC6-209ENST00000440653 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.42
HDAC6-209ENST00000440653 C1orf43Q9BWL3 253 aa6.15□□□□□ -1.42
HDAC6-209ENST00000440653 TMEM126AQ9H061 195 aa6.15□□□□□ -1.42
HDAC6-209ENST00000440653 DNAH10OSP0CZ25 163 aa6.14□□□□□ -1.43
HDAC6-209ENST00000440653 INAFM2P0DMQ5 153 aa6.14□□□□□ -1.43
HDAC6-209ENST00000440653 NANOS2P60321 138 aaKnown RBP6.14□□□□□ -1.43
HDAC6-209ENST00000440653 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
HDAC6-209ENST00000440653 C2orf48Q96LS8 159 aa6.14□□□□□ -1.43
HDAC6-209ENST00000440653 ZNF561-AS1K7EIQ3 104 aa6.13□□□□□ -1.43
HDAC6-209ENST00000440653 SNCGO76070 127 aa6.13□□□□□ -1.43
HDAC6-209ENST00000440653 PCP4P48539 62 aa6.13□□□□□ -1.43
HDAC6-209ENST00000440653 OR13C6PQ8NH95 151 aa6.13□□□□□ -1.43
HDAC6-209ENST00000440653 RMI2Q96E14 147 aa6.13□□□□□ -1.43
HDAC6-209ENST00000440653 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
HDAC6-209ENST00000440653 DNAH17Q9UFH2 4485 aa6.11□□□□□ -1.43
HDAC6-209ENST00000440653 ACYP1P07311 99 aa6.11□□□□□ -1.43
HDAC6-209ENST00000440653 ESRGQ1W209 222 aa6.11□□□□□ -1.43
HDAC6-209ENST00000440653 CAMK2N2Q96S95 79 aa6.11□□□□□ -1.43
HDAC6-209ENST00000440653 DNAH6Q9C0G6 4158 aa6.11□□□□□ -1.43
HDAC6-209ENST00000440653 TEX49A0A1B0GTD5 131 aa6.1□□□□□ -1.43
HDAC6-209ENST00000440653 S100A7L2Q5SY68 101 aa6.1□□□□□ -1.43
HDAC6-209ENST00000440653 KRTAP26-1Q6PEX3 210 aa6.1□□□□□ -1.43
HDAC6-209ENST00000440653 UPK3BQ9BT76 320 aa6.1□□□□□ -1.43
HDAC6-209ENST00000440653 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
HDAC6-209ENST00000440653 PKD1P98161 4303 aa6.09□□□□□ -1.43
HDAC6-209ENST00000440653 H3BQ85 93 aa6.09□□□□□ -1.43
HDAC6-209ENST00000440653 UNQ6190/PRO20217Q6UXQ8 127 aa6.09□□□□□ -1.43
HDAC6-209ENST00000440653 C15orf56Q8N910 161 aa6.09□□□□□ -1.43
HDAC6-209ENST00000440653 FAM218AQ96MZ4 157 aa6.09□□□□□ -1.43
HDAC6-209ENST00000440653 C6orf48Q9UBA6 75 aa6.09□□□□□ -1.43
HDAC6-209ENST00000440653 BAALC-AS2P0C853 105 aa6.08□□□□□ -1.44
HDAC6-209ENST00000440653 C10orf25Q5T742 122 aa6.08□□□□□ -1.44
HDAC6-209ENST00000440653 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
HDAC6-209ENST00000440653 ORMDL1Q9P0S3 153 aa6.08□□□□□ -1.44
HDAC6-209ENST00000440653 IGKV2D-24A0A075B6R9 120 aa6.07□□□□□ -1.44
HDAC6-209ENST00000440653 A0A1B0GVY2 172 aa6.07□□□□□ -1.44
HDAC6-209ENST00000440653 NDUFC2-KCTD14E9PQ53 114 aa6.07□□□□□ -1.44
HDAC6-209ENST00000440653 NCR3O14931 201 aa6.07□□□□□ -1.44
HDAC6-209ENST00000440653 LECT2O14960 151 aa6.07□□□□□ -1.44
HDAC6-209ENST00000440653 IGLV6-57P01721 117 aa6.07□□□□□ -1.44
HDAC6-209ENST00000440653 C9orf116Q5BN46 136 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-209ENST00000440653 C6orf223Q8N319 242 aa6.07□□□□□ -1.44
HDAC6-209ENST00000440653 DMBT1Q9UGM3 2413 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-209ENST00000440653 A0A087WYN8 130 aa6.06□□□□□ -1.44
HDAC6-209ENST00000440653 TRBV7-6A0A0J9YX20 115 aa6.06□□□□□ -1.44
HDAC6-209ENST00000440653 GHRHP01286 108 aa6.06□□□□□ -1.44
HDAC6-209ENST00000440653 XGP55808 180 aa6.05□□□□□ -1.44
HDAC6-209ENST00000440653 C21orf62-AS1Q17RA5 79 aa6.05□□□□□ -1.44
HDAC6-209ENST00000440653 HIGD2BQ4VC39 106 aa6.05□□□□□ -1.44
HDAC6-209ENST00000440653 DIRC1Q969H9 104 aa6.05□□□□□ -1.44
HDAC6-209ENST00000440653 LINC00588Q9Y4M8 146 aa6.05□□□□□ -1.44
HDAC6-209ENST00000440653 TRAV23DV6A0A075B6W5 121 aa6.04□□□□□ -1.44
HDAC6-209ENST00000440653 JMJD7-PLA2G4BH0Y9G9 81 aa6.04□□□□□ -1.44
HDAC6-209ENST00000440653 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
HDAC6-209ENST00000440653 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
HDAC6-209ENST00000440653 Q6ZRU5 148 aa6.04□□□□□ -1.44
HDAC6-209ENST00000440653 TMEM256-PLSCR3K7ERE1 68 aa6.03□□□□□ -1.44
HDAC6-209ENST00000440653 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
HDAC6-209ENST00000440653 C6orf99Q4VX62 202 aa6.03□□□□□ -1.44
HDAC6-209ENST00000440653 Q6Q795 121 aa6.03□□□□□ -1.44
HDAC6-209ENST00000440653 Q8N814 137 aa6.03□□□□□ -1.44
HDAC6-209ENST00000440653 OBSCN-AS1Q96MR7 158 aa6.03□□□□□ -1.44
HDAC6-209ENST00000440653 Q9HAA7 133 aa6.03□□□□□ -1.44
HDAC6-209ENST00000440653 M0R378 163 aa6.02□□□□□ -1.45
HDAC6-209ENST00000440653 VPREB1P12018 145 aa6.02□□□□□ -1.45
HDAC6-209ENST00000440653 LINC00526Q96FQ7 95 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms