RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 COX7B2Q8TF08 81 aa9.73□□□□□ -0.85
LIMD1-202ENST00000440097 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
LIMD1-202ENST00000440097 IGLV10-54A0A075B6I4 117 aa9.72□□□□□ -0.85
LIMD1-202ENST00000440097 Q6JHZ5 121 aa9.72□□□□□ -0.85
LIMD1-202ENST00000440097 RPS28P62857 69 aaKnown RBP9.72□□□□□ -0.85
LIMD1-202ENST00000440097 NCR3O14931 201 aa9.7□□□□□ -0.86
LIMD1-202ENST00000440097 SERP2Q8N6R1 65 aa9.7□□□□□ -0.86
LIMD1-202ENST00000440097 OBSCN-AS1Q96MR7 158 aa9.7□□□□□ -0.86
LIMD1-202ENST00000440097 A0A087WZ39 114 aa9.7□□□□□ -0.86
LIMD1-202ENST00000440097 LECT2O14960 151 aa9.7□□□□□ -0.86
LIMD1-202ENST00000440097 LINC00158P58513 81 aa9.7□□□□□ -0.86
LIMD1-202ENST00000440097 Q6ZTC4 211 aa9.7□□□□□ -0.86
LIMD1-202ENST00000440097 LINC01561Q8N1V8 128 aa9.7□□□□□ -0.86
LIMD1-202ENST00000440097 UPK3BQ9BT76 320 aa9.69□□□□□ -0.86
LIMD1-202ENST00000440097 SLPIP03973 132 aa9.69□□□□□ -0.86
LIMD1-202ENST00000440097 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
LIMD1-202ENST00000440097 A0A0J9YWU9 116 aa9.69□□□□□ -0.86
LIMD1-202ENST00000440097 H0YGX0 51 aa9.69□□□□□ -0.86
LIMD1-202ENST00000440097 CCL18P55774 89 aa9.69□□□□□ -0.86
LIMD1-202ENST00000440097 REG3AQ06141 175 aa9.69□□□□□ -0.86
LIMD1-202ENST00000440097 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
LIMD1-202ENST00000440097 USP17L23D6RBM5 183 aa9.68□□□□□ -0.86
LIMD1-202ENST00000440097 TMEM258P61165 79 aa9.68□□□□□ -0.86
LIMD1-202ENST00000440097 LELP1Q5T871 98 aa9.68□□□□□ -0.86
LIMD1-202ENST00000440097 OR13C6PQ8NH95 151 aa9.68□□□□□ -0.86
LIMD1-202ENST00000440097 MRAPQ8TCY5 172 aa9.67□□□□□ -0.86
LIMD1-202ENST00000440097 PFN2P35080 140 aa9.66□□□□□ -0.86
LIMD1-202ENST00000440097 CHCHD10Q8WYQ3 142 aaPredicted RBP9.66□□□□□ -0.86
LIMD1-202ENST00000440097 DSCR8Q96T75 97 aa9.66□□□□□ -0.86
LIMD1-202ENST00000440097 KPRPQ5T749 579 aaPredicted RBP9.66□□□□□ -0.86
LIMD1-202ENST00000440097 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
LIMD1-202ENST00000440097 NANOS2P60321 138 aaKnown RBP9.65□□□□□ -0.86
LIMD1-202ENST00000440097 OXTP01178 125 aa9.65□□□□□ -0.86
LIMD1-202ENST00000440097 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
LIMD1-202ENST00000440097 LYPD5Q6UWN5 251 aa9.64□□□□□ -0.87
LIMD1-202ENST00000440097 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
LIMD1-202ENST00000440097 STAB2Q8WWQ8 2551 aa9.62□□□□□ -0.87
LIMD1-202ENST00000440097 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
LIMD1-202ENST00000440097 ORMDL1Q9P0S3 153 aa9.62□□□□□ -0.87
LIMD1-202ENST00000440097 CCKP06307 115 aa9.61□□□□□ -0.87
LIMD1-202ENST00000440097 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
LIMD1-202ENST00000440097 WFDC10BQ8IUB3 73 aa9.6□□□□□ -0.87
LIMD1-202ENST00000440097 Q8IZM0 81 aa9.59□□□□□ -0.87
LIMD1-202ENST00000440097 GHRHP01286 108 aa9.58□□□□□ -0.88
LIMD1-202ENST00000440097 C4orf26Q17RF5 130 aa9.58□□□□□ -0.88
LIMD1-202ENST00000440097 COL7A1Q02388 2944 aa9.58□□□□□ -0.88
LIMD1-202ENST00000440097 TRAV23DV6A0A075B6W5 121 aa9.58□□□□□ -0.88
LIMD1-202ENST00000440097 H3BNG1 76 aa9.58□□□□□ -0.88
LIMD1-202ENST00000440097 DNAH3Q8TD57 4116 aa9.57□□□□□ -0.88
LIMD1-202ENST00000440097 K7EIL1 84 aa9.57□□□□□ -0.88
LIMD1-202ENST00000440097 FAM19A1Q7Z5A9 133 aa9.57□□□□□ -0.88
LIMD1-202ENST00000440097 TENM2Q9NT68 2774 aa9.56□□□□□ -0.88
LIMD1-202ENST00000440097 TGP01266 2768 aa9.56□□□□□ -0.88
LIMD1-202ENST00000440097 ENHOQ6UWT2 76 aa9.56□□□□□ -0.88
LIMD1-202ENST00000440097 ESRGQ1W209 222 aa9.55□□□□□ -0.88
LIMD1-202ENST00000440097 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
LIMD1-202ENST00000440097 Q5XG85 94 aa9.55□□□□□ -0.88
LIMD1-202ENST00000440097 CSMD3Q7Z407 3707 aa9.55□□□□□ -0.88
LIMD1-202ENST00000440097 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
LIMD1-202ENST00000440097 JMJD7-PLA2G4BH0Y9G9 81 aa9.54□□□□□ -0.88
LIMD1-202ENST00000440097 SPAG11BQ08648 103 aa9.54□□□□□ -0.88
LIMD1-202ENST00000440097 HRCT1Q6UXD1 115 aa9.54□□□□□ -0.88
LIMD1-202ENST00000440097 LINC00167Q96N53 147 aa9.54□□□□□ -0.88
LIMD1-202ENST00000440097 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
LIMD1-202ENST00000440097 C9orf116Q5BN46 136 aaPredicted RBP9.53□□□□□ -0.88
LIMD1-202ENST00000440097 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
LIMD1-202ENST00000440097 Q8N814 137 aa9.53□□□□□ -0.88
LIMD1-202ENST00000440097 KIAA0087Q14695 138 aa9.52□□□□□ -0.88
LIMD1-202ENST00000440097 C6orf223Q8N319 242 aa9.52□□□□□ -0.88
LIMD1-202ENST00000440097 C20orf197Q8N268 126 aa9.52□□□□□ -0.89
LIMD1-202ENST00000440097 NDUFC2O95298 119 aa9.51□□□□□ -0.89
LIMD1-202ENST00000440097 TM2D3Q9BRN9 247 aa9.51□□□□□ -0.89
LIMD1-202ENST00000440097 TMEM256-PLSCR3K7ERE1 68 aa9.51□□□□□ -0.89
LIMD1-202ENST00000440097 TRAV10A0A0B4J240 114 aa9.5□□□□□ -0.89
LIMD1-202ENST00000440097 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
LIMD1-202ENST00000440097 LYSTQ99698 3801 aa9.49□□□□□ -0.89
LIMD1-202ENST00000440097 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
LIMD1-202ENST00000440097 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
LIMD1-202ENST00000440097 MEGF8Q7Z7M0 2845 aa9.48□□□□□ -0.89
LIMD1-202ENST00000440097 C10orf25Q5T742 122 aa9.48□□□□□ -0.89
LIMD1-202ENST00000440097 HIGD2BQ4VC39 106 aa9.47□□□□□ -0.89
LIMD1-202ENST00000440097 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
LIMD1-202ENST00000440097 COX17Q14061 63 aa9.47□□□□□ -0.89
LIMD1-202ENST00000440097 C1orf43Q9BWL3 253 aa9.47□□□□□ -0.89
LIMD1-202ENST00000440097 HUWE1Q7Z6Z7 4374 aaKnown RBP9.47□□□□□ -0.89
LIMD1-202ENST00000440097 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.89
LIMD1-202ENST00000440097 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.9
LIMD1-202ENST00000440097 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.9
LIMD1-202ENST00000440097 FAM236CP0DP71 79 aa9.46□□□□□ -0.9
LIMD1-202ENST00000440097 PRKDCP78527 4128 aaKnown RBP9.45□□□□□ -0.9
LIMD1-202ENST00000440097 LINC01556Q5JQF7 62 aa9.44□□□□□ -0.9
LIMD1-202ENST00000440097 C6orf99Q4VX62 202 aa9.44□□□□□ -0.9
LIMD1-202ENST00000440097 CAMK2N2Q96S95 79 aa9.43□□□□□ -0.9
LIMD1-202ENST00000440097 Q6ZQT0 140 aa9.42□□□□□ -0.9
LIMD1-202ENST00000440097 H7BZZ5 65 aa9.42□□□□□ -0.9
LIMD1-202ENST00000440097 M0R2N4 97 aa9.42□□□□□ -0.9
LIMD1-202ENST00000440097 Q8NDZ9 215 aa9.41□□□□□ -0.9
LIMD1-202ENST00000440097 LINC00588Q9Y4M8 146 aa9.41□□□□□ -0.9
LIMD1-202ENST00000440097 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
LIMD1-202ENST00000440097 RBM3P98179 157 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms