RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 LINC00336Q6ZUF6 198 aa9.65□□□□□ -0.86
TNFRSF1A-204ENST00000440083 BIRC6Q9NR09 4857 aa9.65□□□□□ -0.86
TNFRSF1A-204ENST00000440083 SND1-IT1Q9HBX3 110 aa9.64□□□□□ -0.87
TNFRSF1A-204ENST00000440083 SCGB1C2P0DMR2 95 aa9.63□□□□□ -0.87
TNFRSF1A-204ENST00000440083 KRTAP26-1Q6PEX3 210 aa9.63□□□□□ -0.87
TNFRSF1A-204ENST00000440083 A0A1B0GVY2 172 aa9.62□□□□□ -0.87
TNFRSF1A-204ENST00000440083 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
TNFRSF1A-204ENST00000440083 TRAV13-2A0A0B4J235 113 aa9.61□□□□□ -0.87
TNFRSF1A-204ENST00000440083 UNQ6190/PRO20217Q6UXQ8 127 aa9.61□□□□□ -0.87
TNFRSF1A-204ENST00000440083 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-204ENST00000440083 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
TNFRSF1A-204ENST00000440083 CAMK2N2Q96S95 79 aa9.61□□□□□ -0.87
TNFRSF1A-204ENST00000440083 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
TNFRSF1A-204ENST00000440083 PKHD1P08F94 4074 aa9.6□□□□□ -0.87
TNFRSF1A-204ENST00000440083 TRBV20-1A0A075B6N2 111 aa9.59□□□□□ -0.87
TNFRSF1A-204ENST00000440083 GVQW2A0A096LPI5 108 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-204ENST00000440083 F8WDY8 70 aa9.59□□□□□ -0.87
TNFRSF1A-204ENST00000440083 COX6CP09669 75 aa9.59□□□□□ -0.87
TNFRSF1A-204ENST00000440083 C2orf48Q96LS8 159 aa9.59□□□□□ -0.87
TNFRSF1A-204ENST00000440083 DNAH5Q8TE73 4624 aa9.59□□□□□ -0.87
TNFRSF1A-204ENST00000440083 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
TNFRSF1A-204ENST00000440083 C9orf116Q5BN46 136 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF1A-204ENST00000440083 C10orf25Q5T742 122 aa9.58□□□□□ -0.88
TNFRSF1A-204ENST00000440083 TRIAP1O43715 76 aa9.57□□□□□ -0.88
TNFRSF1A-204ENST00000440083 C6orf48Q9UBA6 75 aa9.57□□□□□ -0.88
TNFRSF1A-204ENST00000440083 H3BMG7 143 aa9.55□□□□□ -0.88
TNFRSF1A-204ENST00000440083 FUSP35637 526 aaKnown RBP eCLIP9.55□□□□□ -0.88
TNFRSF1A-204ENST00000440083 PSCAO43653 123 aa9.54□□□□□ -0.88
TNFRSF1A-204ENST00000440083 NDUFC2O95298 119 aa9.54□□□□□ -0.88
TNFRSF1A-204ENST00000440083 TCL1BO95988 128 aa9.54□□□□□ -0.88
TNFRSF1A-204ENST00000440083 ATXN8Q156A1 80 aa9.54□□□□□ -0.88
TNFRSF1A-204ENST00000440083 LRP1BQ9NZR2 4599 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 IGKV2-28A0A075B6P5 120 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 A0A087WTM6 91 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 USP17L23D6RBM5 183 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 IGKV2D-28P01615 120 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 KRTAP10-2P60368 255 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 WFDC2Q14508 124 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 Q6ZRU5 148 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 LINC00337Q8N6G1 96 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 OR13C6PQ8NH95 151 aa9.53□□□□□ -0.88
TNFRSF1A-204ENST00000440083 LECT2O14960 151 aa9.52□□□□□ -0.89
TNFRSF1A-204ENST00000440083 LRCOL1A6NCL2 159 aa9.51□□□□□ -0.89
TNFRSF1A-204ENST00000440083 F8W1H4 67 aa9.51□□□□□ -0.89
TNFRSF1A-204ENST00000440083 CARD19Q96LW7 228 aa9.51□□□□□ -0.89
TNFRSF1A-204ENST00000440083 KRTAP17-1Q9BYP8 105 aa9.51□□□□□ -0.89
TNFRSF1A-204ENST00000440083 NCR3O14931 201 aa9.49□□□□□ -0.89
TNFRSF1A-204ENST00000440083 NDUFC2-KCTD14E9PQ53 114 aa9.48□□□□□ -0.89
TNFRSF1A-204ENST00000440083 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
TNFRSF1A-204ENST00000440083 MTURNQ8N3F0 131 aa9.48□□□□□ -0.89
TNFRSF1A-204ENST00000440083 KIAA1109Q2LD37 5005 aa9.48□□□□□ -0.89
TNFRSF1A-204ENST00000440083 RNF151Q2KHN1 245 aa9.47□□□□□ -0.89
TNFRSF1A-204ENST00000440083 S100A7L2Q5SY68 101 aa9.47□□□□□ -0.89
TNFRSF1A-204ENST00000440083 CLEC2BQ92478 149 aa9.47□□□□□ -0.89
TNFRSF1A-204ENST00000440083 C16orf90A8MZG2 172 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 C9JAW5 83 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 LST1O00453 97 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 LINC01620Q4KN68 170 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 Q8N814 137 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 SMIM11BQ8TCY0 68 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 TMEM126AQ9H061 195 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 XAGE1AQ9HD64 81 aa9.46□□□□□ -0.9
TNFRSF1A-204ENST00000440083 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
TNFRSF1A-204ENST00000440083 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
TNFRSF1A-204ENST00000440083 APOBP04114 4563 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-204ENST00000440083 TRBV10-2A0A0K0K1G8 114 aa9.44□□□□□ -0.9
TNFRSF1A-204ENST00000440083 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-204ENST00000440083 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-204ENST00000440083 GAGE2EQ4V326 116 aa9.44□□□□□ -0.9
TNFRSF1A-204ENST00000440083 GAGE2DQ9UEU5 116 aa9.44□□□□□ -0.9
TNFRSF1A-204ENST00000440083 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
TNFRSF1A-204ENST00000440083 SLC25A20O43772 301 aa9.43□□□□□ -0.9
TNFRSF1A-204ENST00000440083 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF1A-204ENST00000440083 H0YGX0 51 aa9.42□□□□□ -0.9
TNFRSF1A-204ENST00000440083 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
TNFRSF1A-204ENST00000440083 RYR1P21817 5038 aa9.41□□□□□ -0.9
TNFRSF1A-204ENST00000440083 Q6ZRP5 223 aa9.41□□□□□ -0.9
TNFRSF1A-204ENST00000440083 Q8NDZ9 215 aa9.41□□□□□ -0.9
TNFRSF1A-204ENST00000440083 IGLV5-52A0A0A0MRZ9 124 aa9.4□□□□□ -0.9
TNFRSF1A-204ENST00000440083 HERC2O95714 4834 aa9.4□□□□□ -0.9
TNFRSF1A-204ENST00000440083 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 H3BT86 120 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 M0QXV9 152 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 DNAL4O96015 105 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 TRACP01848 142 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 VPREB1P12018 145 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 KRTAP10-1P60331 282 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 OCIAD2Q56VL3 154 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 CBY1Q9Y3M2 126 aa9.39□□□□□ -0.91
TNFRSF1A-204ENST00000440083 K7ERU9 68 aa9.38□□□□□ -0.91
TNFRSF1A-204ENST00000440083 M0R378 163 aa9.38□□□□□ -0.91
TNFRSF1A-204ENST00000440083 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-204ENST00000440083 ETDBQ3ZM63 59 aa9.38□□□□□ -0.91
TNFRSF1A-204ENST00000440083 ANKRD29Q8N6D5 301 aa9.38□□□□□ -0.91
TNFRSF1A-204ENST00000440083 NKAPP1Q8N9T2 125 aa9.38□□□□□ -0.91
TNFRSF1A-204ENST00000440083 IGLV6-57P01721 117 aa9.37□□□□□ -0.91
TNFRSF1A-204ENST00000440083 SLPIP03973 132 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms