RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 BRK1Q8WUW1 75 aa8.08□□□□□ -1.12
TRAPPC9-202ENST00000438773 APCP25054 2843 aa8.08□□□□□ -1.12
TRAPPC9-202ENST00000438773 GIG44P09565 113 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 SYCNQ0VAF6 134 aa8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 CSNK1G2-AS1Q8NCQ2 148 aa8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 LITAFQ99732 161 aa8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 CYSRT1A8MQ03 144 aa8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 NREPQ16612 68 aa8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 UNQ6190/PRO20217Q6UXQ8 127 aa8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
TRAPPC9-202ENST00000438773 PRR4Q16378 134 aa8.06□□□□□ -1.12
TRAPPC9-202ENST00000438773 C5orf47Q569G3 176 aa8.06□□□□□ -1.12
TRAPPC9-202ENST00000438773 LYPD5Q6UWN5 251 aa8.06□□□□□ -1.12
TRAPPC9-202ENST00000438773 IGKV2-24A0A0C4DH68 120 aa8.06□□□□□ -1.12
TRAPPC9-202ENST00000438773 SVIPQ8NHG7 77 aa8.06□□□□□ -1.12
TRAPPC9-202ENST00000438773 WFDC10BQ8IUB3 73 aa8.06□□□□□ -1.12
TRAPPC9-202ENST00000438773 PPDPFQ9H3Y8 114 aa8.06□□□□□ -1.12
TRAPPC9-202ENST00000438773 JMJD7-PLA2G4BH0Y9G9 81 aa8.05□□□□□ -1.12
TRAPPC9-202ENST00000438773 HRCT1Q6UXD1 115 aa8.05□□□□□ -1.12
TRAPPC9-202ENST00000438773 A0A087WYN8 130 aa8.05□□□□□ -1.12
TRAPPC9-202ENST00000438773 A0A096LNI7 61 aa8.05□□□□□ -1.12
TRAPPC9-202ENST00000438773 Q8NAQ8 132 aa8.05□□□□□ -1.12
TRAPPC9-202ENST00000438773 TMEM256-PLSCR3K7ERE1 68 aa8.04□□□□□ -1.12
TRAPPC9-202ENST00000438773 IGHV3OR16-9A0A0B4J2B5 98 aa8.04□□□□□ -1.12
TRAPPC9-202ENST00000438773 Q6ZQY7 126 aa8.04□□□□□ -1.12
TRAPPC9-202ENST00000438773 M0R2N4 97 aa8.03□□□□□ -1.12
TRAPPC9-202ENST00000438773 NBEAL2Q6ZNJ1 2754 aa8.03□□□□□ -1.12
TRAPPC9-202ENST00000438773 C3orf84H3BNL1 204 aa8.03□□□□□ -1.12
TRAPPC9-202ENST00000438773 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC9-202ENST00000438773 MDFIQ99750 246 aa8.03□□□□□ -1.12
TRAPPC9-202ENST00000438773 NBEAL1Q6ZS30 2694 aa8.02□□□□□ -1.12
TRAPPC9-202ENST00000438773 LRCOL1A6NCL2 159 aa8.02□□□□□ -1.13
TRAPPC9-202ENST00000438773 COX7CP15954 63 aa8.02□□□□□ -1.13
TRAPPC9-202ENST00000438773 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
TRAPPC9-202ENST00000438773 COX7BP24311 80 aa8.01□□□□□ -1.13
TRAPPC9-202ENST00000438773 COX17Q14061 63 aa8□□□□□ -1.13
TRAPPC9-202ENST00000438773 FAM19A1Q7Z5A9 133 aa8□□□□□ -1.13
TRAPPC9-202ENST00000438773 SERP2Q8N6R1 65 aa8□□□□□ -1.13
TRAPPC9-202ENST00000438773 PLAC8L1A1L4L8 177 aa8□□□□□ -1.13
TRAPPC9-202ENST00000438773 C14orf177Q52M58 125 aa8□□□□□ -1.13
TRAPPC9-202ENST00000438773 C6orf223Q8N319 242 aa8□□□□□ -1.13
TRAPPC9-202ENST00000438773 IGLV5-45A0A087WSX0 123 aa7.99□□□□□ -1.13
TRAPPC9-202ENST00000438773 MXRA5Q9NR99 2828 aa7.99□□□□□ -1.13
TRAPPC9-202ENST00000438773 LINC00846Q9NV44 126 aa7.99□□□□□ -1.13
TRAPPC9-202ENST00000438773 TMEM258P61165 79 aa7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 Q8N3U1 123 aa7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 FAM236DA0A1B0GTK5 79 aa7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 FAM236CP0DP71 79 aa7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 LINC00337Q8N6G1 96 aa7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 FUSP35637 526 aaKnown RBP eCLIP7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 ESRGQ1W209 222 aa7.98□□□□□ -1.13
TRAPPC9-202ENST00000438773 FBN2P35556 2912 aa7.96□□□□□ -1.13
TRAPPC9-202ENST00000438773 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
TRAPPC9-202ENST00000438773 CCKP06307 115 aa7.96□□□□□ -1.14
TRAPPC9-202ENST00000438773 EGFEM1PQ0D2K5 195 aa7.96□□□□□ -1.14
TRAPPC9-202ENST00000438773 SOSTDC1Q6X4U4 206 aa7.96□□□□□ -1.14
TRAPPC9-202ENST00000438773 BPY2O14599 106 aa7.95□□□□□ -1.14
TRAPPC9-202ENST00000438773 NDUFS5O43920 106 aa7.95□□□□□ -1.14
TRAPPC9-202ENST00000438773 KRTAP10-11P60412 298 aa7.95□□□□□ -1.14
TRAPPC9-202ENST00000438773 FAM218AQ96MZ4 157 aa7.95□□□□□ -1.14
TRAPPC9-202ENST00000438773 AKAP9Q99996 3911 aa7.95□□□□□ -1.14
TRAPPC9-202ENST00000438773 HIVEP1P15822 2718 aa7.95□□□□□ -1.14
TRAPPC9-202ENST00000438773 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
TRAPPC9-202ENST00000438773 WWC2-AS2Q96NR7 200 aa7.95□□□□□ -1.14
TRAPPC9-202ENST00000438773 NF1P21359 2839 aa7.94□□□□□ -1.14
TRAPPC9-202ENST00000438773 NIPBLQ6KC79 2804 aaeCLIP7.94□□□□□ -1.14
TRAPPC9-202ENST00000438773 Q6Q795 121 aa7.94□□□□□ -1.14
TRAPPC9-202ENST00000438773 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
TRAPPC9-202ENST00000438773 M0R378 163 aa7.94□□□□□ -1.14
TRAPPC9-202ENST00000438773 LINC01561Q8N1V8 128 aa7.94□□□□□ -1.14
TRAPPC9-202ENST00000438773 UBE2AP49459 152 aa7.93□□□□□ -1.14
TRAPPC9-202ENST00000438773 HIGD2AQ9BW72 106 aa7.93□□□□□ -1.14
TRAPPC9-202ENST00000438773 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
TRAPPC9-202ENST00000438773 B9D2Q9BPU9 175 aa7.93□□□□□ -1.14
TRAPPC9-202ENST00000438773 H3BQ85 93 aa7.92□□□□□ -1.14
TRAPPC9-202ENST00000438773 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
TRAPPC9-202ENST00000438773 H3BNG1 76 aa7.92□□□□□ -1.14
TRAPPC9-202ENST00000438773 FAM240AA0A1B0GVK7 77 aa7.92□□□□□ -1.14
TRAPPC9-202ENST00000438773 LINC01556Q5JQF7 62 aa7.91□□□□□ -1.14
TRAPPC9-202ENST00000438773 Q8N9L7 120 aa7.91□□□□□ -1.14
TRAPPC9-202ENST00000438773 RPL37AP8A6NKH3 93 aa7.9□□□□□ -1.14
TRAPPC9-202ENST00000438773 LINC00612Q8N6U2 182 aa7.9□□□□□ -1.14
TRAPPC9-202ENST00000438773 TRBV10-3A0A0K0K1G6 114 aa7.9□□□□□ -1.14
TRAPPC9-202ENST00000438773 ZNF73O43830 326 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC9-202ENST00000438773 Q6ZRU5 148 aa7.9□□□□□ -1.14
TRAPPC9-202ENST00000438773 LINC01600Q96MT4 127 aa7.9□□□□□ -1.14
TRAPPC9-202ENST00000438773 NSD1Q96L73 2696 aaPredicted RBP7.9□□□□□ -1.15
TRAPPC9-202ENST00000438773 SPTSSBQ8NFR3 76 aa7.9□□□□□ -1.15
TRAPPC9-202ENST00000438773 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
TRAPPC9-202ENST00000438773 NDUFC2O95298 119 aa7.88□□□□□ -1.15
TRAPPC9-202ENST00000438773 WFDC13Q8IUB5 93 aa7.88□□□□□ -1.15
TRAPPC9-202ENST00000438773 C2orf48Q96LS8 159 aa7.88□□□□□ -1.15
TRAPPC9-202ENST00000438773 C10orf25Q5T742 122 aa7.87□□□□□ -1.15
TRAPPC9-202ENST00000438773 Q8N814 137 aa7.87□□□□□ -1.15
TRAPPC9-202ENST00000438773 K7EIL1 84 aa7.87□□□□□ -1.15
TRAPPC9-202ENST00000438773 Q6JHZ5 121 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 516 ms