RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FXYD6Q9H0Q3 95 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 CST9LQ9H4G1 147 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 CACFD1Q9UGQ2 172 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 C22orf24Q9Y442 160 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 TRBV19A0A075B6N1 114 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 TRAV7A0A075B6U4 112 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 LST1O00453 97 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 NDUFA1O15239 70 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 PMP2P02689 132 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 RBM3P98179 157 aaKnown RBP1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 SPAG11BQ08648 103 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 FABP9Q0Z7S8 132 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 COTL1Q14019 142 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 C10orf113Q5VZT2 155 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 CROCCP2Q86T23 111 aa1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 SLC25A21Q9BQT8 299 aaPredicted RBP1.02□□□□□ -2.25
HMGB3P12-201ENST00000438745 MUC5ACP98088 5654 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 TRBV6-5A0A0K0K1A5 114 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 C3orf85A0A1B0GTC6 90 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 IRGMA1A4Y4 181 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 LEPROTO15243 131 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 TRGC1P0CF51 173 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 SULT1A3P0DMM9 295 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 SULT1A4P0DMN0 295 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 IAPPP10997 89 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 RNASE3P12724 160 aaKnown RBP1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 NKX2-5P52952 324 aaPredicted RBP1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 PRLHP81277 87 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 PDE6HQ13956 83 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 IZUMO2Q6UXV1 221 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 PATE2Q6UY27 113 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 C7orf65Q6ZTY9 151 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 C12orf45Q8N5I9 185 aaPredicted RBP1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 TERB2Q8NHR7 220 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 TP53RKQ96S44 253 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 LIMD2Q9BT23 127 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 NMES1Q9C002 83 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 MRPL35Q9NZE8 188 aaKnown RBP1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 COPZ2Q9P299 210 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 LENEPQ9Y5L5 61 aa1.01□□□□□ -2.25
HMGB3P12-201ENST00000438745 DISC1C4P0D8 188 aa1□□□□□ -2.25
HMGB3P12-201ENST00000438745 H3BVH4 76 aa1□□□□□ -2.25
HMGB3P12-201ENST00000438745 PDCD5O14737 125 aa1□□□□□ -2.25
HMGB3P12-201ENST00000438745 RAB4BP61018 213 aa1□□□□□ -2.25
HMGB3P12-201ENST00000438745 DEFB107AQ8IZN7 70 aa1□□□□□ -2.25
HMGB3P12-201ENST00000438745 PLEKHB2Q96CS7 222 aa1□□□□□ -2.25
HMGB3P12-201ENST00000438745 AP4S1Q9Y587 144 aa1□□□□□ -2.25
HMGB3P12-201ENST00000438745 LINC00959A0A1B0GUT2 108 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 A0A1B0GW54 56 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 MT1BP07438 61 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 ARL14EPLP0DKL9 152 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 PYYP10082 97 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 TPT1P13693 172 aaKnown RBP0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 AKR1C3P42330 323 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 RRAS2P62070 204 aaPredicted RBP0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 HIST1H4AP62805 103 aaKnown RBP0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 BATFQ16520 125 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 SPANXN5Q5MJ07 72 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 C9orf153Q5TBE3 101 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 SSBP3-AS1Q7Z2R9 100 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 CLVS1Q8IUQ0 354 aaPredicted RBP0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 HYLS1Q96M11 299 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 SPRR4Q96PI1 79 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 PFDN5Q99471 154 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 LYRM2Q9NU23 88 aaPredicted RBP0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 TMEM242Q9NWH2 141 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 C6orf48Q9UBA6 75 aa0.99□□□□□ -2.25
HMGB3P12-201ENST00000438745 EFCAB10A6NFE3 127 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 IFITM5A6NNB3 132 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 ARMS2P0C7Q2 107 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 SMIM17P0DL12 118 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 ZNF80P51504 273 aaPredicted RBP0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 RANP62826 216 aaKnown RBP0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 SMCO1Q147U7 214 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 HRCT1Q6UXD1 115 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 UNQ6190/PRO20217Q6UXQ8 127 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 C5orf38Q86SI9 138 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 Q86TA4 180 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 MBD3L1Q8WWY6 194 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 CIB3Q96Q77 187 aaPredicted RBP0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 XAGE1AQ9HD64 81 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 TMEM14CQ9P0S9 112 aa0.98□□□□□ -2.25
HMGB3P12-201ENST00000438745 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 C1orf196B1AJZ1 125 aa0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 MGPP08493 103 aa0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 SRP19P09132 144 aaKnown RBP0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 NBEAP1P0C6P0 100 aa0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 NCS1P62166 190 aa0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 FAM74A1Q5RGS3 127 aa0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 GOLT1AQ6ZVE7 132 aa0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 CNBD2Q96M20 576 aa0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 ARL2-SNX15V9GYD0 113 aa0.97□□□□□ -2.25
HMGB3P12-201ENST00000438745 LOC107984156A0A0G2JMH3 177 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 TRBV30A0A0K0K1B3 111 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 ZNF727A8MUV8 499 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 INMT-MINDY4F8WBC2 141 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 ZNF25P17030 456 aaPredicted RBP0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 FGF7P21781 194 aa0.96□□□□□ -2.26
HMGB3P12-201ENST00000438745 DEFA3P59666 94 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms