RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 LINC00158P58513 81 aa11.99□□□□□ -0.49
LMBR1-208ENST00000434278 LPAP08519 4548 aa11.99□□□□□ -0.49
LMBR1-208ENST00000434278 COLCA2A8K830 154 aa11.98□□□□□ -0.49
LMBR1-208ENST00000434278 H0Y8G0 127 aa11.98□□□□□ -0.49
LMBR1-208ENST00000434278 UBE2AP49459 152 aa11.98□□□□□ -0.49
LMBR1-208ENST00000434278 RNF213Q63HN8 5207 aa11.98□□□□□ -0.49
LMBR1-208ENST00000434278 A0A087X002 238 aa11.97□□□□□ -0.49
LMBR1-208ENST00000434278 TMEM238C9JI98 176 aa11.97□□□□□ -0.49
LMBR1-208ENST00000434278 LEPROTL1O95214 131 aa11.97□□□□□ -0.49
LMBR1-208ENST00000434278 SMIM13P0DJ93 91 aa11.96□□□□□ -0.49
LMBR1-208ENST00000434278 TMEM126AQ9H061 195 aa11.96□□□□□ -0.49
LMBR1-208ENST00000434278 M0R378 163 aa11.94□□□□□ -0.5
LMBR1-208ENST00000434278 PRLHP81277 87 aa11.94□□□□□ -0.5
LMBR1-208ENST00000434278 ANAPC11Q9NYG5 84 aa11.94□□□□□ -0.5
LMBR1-208ENST00000434278 FAM19A1Q7Z5A9 133 aa11.93□□□□□ -0.5
LMBR1-208ENST00000434278 CRYGAP11844 174 aa11.92□□□□□ -0.5
LMBR1-208ENST00000434278 FABP4P15090 132 aa11.92□□□□□ -0.5
LMBR1-208ENST00000434278 MEIG1Q5JSS6 88 aa11.92□□□□□ -0.5
LMBR1-208ENST00000434278 NDUFA12Q9UI09 145 aa11.92□□□□□ -0.5
LMBR1-208ENST00000434278 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
LMBR1-208ENST00000434278 HERV-K104P63124 156 aa11.91□□□□□ -0.5
LMBR1-208ENST00000434278 MIR7-3HGQ8N6C7 128 aa11.91□□□□□ -0.5
LMBR1-208ENST00000434278 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
LMBR1-208ENST00000434278 ATP6V1G1O75348 118 aa11.89□□□□□ -0.51
LMBR1-208ENST00000434278 TYMSOSQ8TAI1 123 aa11.89□□□□□ -0.51
LMBR1-208ENST00000434278 PMCHL2Q9BQD1 86 aa11.89□□□□□ -0.51
LMBR1-208ENST00000434278 MYMXA0A1B0GTQ4 84 aa11.88□□□□□ -0.51
LMBR1-208ENST00000434278 PLNP26678 52 aa11.88□□□□□ -0.51
LMBR1-208ENST00000434278 KRTAP13-2Q52LG2 175 aa11.88□□□□□ -0.51
LMBR1-208ENST00000434278 BOD1L2Q8IYS8 172 aa11.88□□□□□ -0.51
LMBR1-208ENST00000434278 LEPROTO15243 131 aa11.87□□□□□ -0.51
LMBR1-208ENST00000434278 DPM2O94777 84 aa11.86□□□□□ -0.51
LMBR1-208ENST00000434278 TSPAN13O95857 204 aa11.86□□□□□ -0.51
LMBR1-208ENST00000434278 FAM229BQ4G0N7 80 aa11.86□□□□□ -0.51
LMBR1-208ENST00000434278 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
LMBR1-208ENST00000434278 PLEKHB2Q96CS7 222 aa11.85□□□□□ -0.51
LMBR1-208ENST00000434278 NCR3O14931 201 aa11.84□□□□□ -0.51
LMBR1-208ENST00000434278 IGKCP01834 107 aa11.84□□□□□ -0.51
LMBR1-208ENST00000434278 J3QQQ9 107 aa11.83□□□□□ -0.52
LMBR1-208ENST00000434278 PRR4Q16378 134 aa11.83□□□□□ -0.52
LMBR1-208ENST00000434278 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.52
LMBR1-208ENST00000434278 DAND5Q8N907 189 aa11.82□□□□□ -0.52
LMBR1-208ENST00000434278 HIGD2AQ9BW72 106 aa11.82□□□□□ -0.52
LMBR1-208ENST00000434278 HERVK_113P61574 105 aa11.81□□□□□ -0.52
LMBR1-208ENST00000434278 IGKV2D-26A0A0A0MRZ7 120 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 PRYO14603 147 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BKO60814 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BJP06899 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BOP23527 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BBP33778 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BDP58876 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BCP62807 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST2H2BEQ16778 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BHQ93079 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BNQ99877 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 HIST1H2BMQ99879 126 aa11.8□□□□□ -0.52
LMBR1-208ENST00000434278 LOC107984156A0A0G2JMH3 177 aa11.79□□□□□ -0.52
LMBR1-208ENST00000434278 SPRR1AP35321 89 aa11.79□□□□□ -0.52
LMBR1-208ENST00000434278 ARL17AQ8IVW1 177 aa11.79□□□□□ -0.52
LMBR1-208ENST00000434278 KCNQ1DNQ9H478 68 aa11.79□□□□□ -0.52
LMBR1-208ENST00000434278 TRBV10-3A0A0K0K1G6 114 aa11.78□□□□□ -0.52
LMBR1-208ENST00000434278 LGALS3P17931 250 aaKnown RBP11.78□□□□□ -0.52
LMBR1-208ENST00000434278 NMUP48645 174 aa11.78□□□□□ -0.52
LMBR1-208ENST00000434278 KRTAP4-16G5E9R7 235 aaPredicted RBP11.76□□□□□ -0.53
LMBR1-208ENST00000434278 LINC00337Q8N6G1 96 aa11.76□□□□□ -0.53
LMBR1-208ENST00000434278 LINC00304Q8N9R0 145 aa11.75□□□□□ -0.53
LMBR1-208ENST00000434278 SPRR4Q96PI1 79 aa11.75□□□□□ -0.53
LMBR1-208ENST00000434278 SYS1-DBNDD2H3BUS1 97 aa11.74□□□□□ -0.53
LMBR1-208ENST00000434278 C3orf22Q8N5N4 141 aa11.74□□□□□ -0.53
LMBR1-208ENST00000434278 E9PLD3 99 aa11.73□□□□□ -0.53
LMBR1-208ENST00000434278 ETDCA0A1B0GVM5 59 aa11.72□□□□□ -0.53
LMBR1-208ENST00000434278 A0A0J9YXY3 114 aa11.71□□□□□ -0.53
LMBR1-208ENST00000434278 TRBV10-2A0A0K0K1G8 114 aa11.71□□□□□ -0.53
LMBR1-208ENST00000434278 ADAMTSL4-AS1Q5T5F5 129 aa11.71□□□□□ -0.53
LMBR1-208ENST00000434278 SMCR5Q8TEV8 140 aa11.71□□□□□ -0.53
LMBR1-208ENST00000434278 EIF4EBP3O60516 100 aaPredicted RBP11.7□□□□□ -0.54
LMBR1-208ENST00000434278 DDTP30046 118 aa11.7□□□□□ -0.54
LMBR1-208ENST00000434278 SOSTDC1Q6X4U4 206 aa11.7□□□□□ -0.54
LMBR1-208ENST00000434278 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
LMBR1-208ENST00000434278 NPC2P61916 151 aa11.69□□□□□ -0.54
LMBR1-208ENST00000434278 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
LMBR1-208ENST00000434278 SPANXB1Q9NS25 103 aaPredicted RBP11.69□□□□□ -0.54
LMBR1-208ENST00000434278 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
LMBR1-208ENST00000434278 B5MCH6 92 aa11.68□□□□□ -0.54
LMBR1-208ENST00000434278 NDUFC2O95298 119 aa11.68□□□□□ -0.54
LMBR1-208ENST00000434278 S100A12P80511 92 aa11.68□□□□□ -0.54
LMBR1-208ENST00000434278 RETNLBQ9BQ08 111 aa11.68□□□□□ -0.54
LMBR1-208ENST00000434278 PET117Q6UWS5 81 aa11.67□□□□□ -0.54
LMBR1-208ENST00000434278 IGLV6-57P01721 117 aa11.66□□□□□ -0.54
LMBR1-208ENST00000434278 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
LMBR1-208ENST00000434278 ERC2-IT1O76042 136 aa11.64□□□□□ -0.55
LMBR1-208ENST00000434278 C3orf79P0CE67 100 aa11.64□□□□□ -0.55
LMBR1-208ENST00000434278 COA6Q5JTJ3 125 aaKnown RBP11.64□□□□□ -0.55
LMBR1-208ENST00000434278 S100A7L2Q5SY68 101 aa11.64□□□□□ -0.55
LMBR1-208ENST00000434278 LITAFQ99732 161 aa11.64□□□□□ -0.55
LMBR1-208ENST00000434278 CTAG1AP78358 180 aa11.62□□□□□ -0.55
LMBR1-208ENST00000434278 Q9BRP9 147 aa11.62□□□□□ -0.55
LMBR1-208ENST00000434278 LINC00483Q53H64 154 aa11.61□□□□□ -0.55
LMBR1-208ENST00000434278 Q6ZRX8 168 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms