RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 A0A087X002 238 aa13.11□□□□□ -0.31
SEMA3B-205ENST00000434030 A0A0U1RRA0 63 aa13.11□□□□□ -0.31
SEMA3B-205ENST00000434030 SERF1AO75920 110 aa13.1□□□□□ -0.31
SEMA3B-205ENST00000434030 TMEM238C9JI98 176 aa13.09□□□□□ -0.31
SEMA3B-205ENST00000434030 H0Y8G0 127 aa13.09□□□□□ -0.31
SEMA3B-205ENST00000434030 LEPROTL1O95214 131 aa13.09□□□□□ -0.31
SEMA3B-205ENST00000434030 TMEM126AQ9H061 195 aa13.09□□□□□ -0.31
SEMA3B-205ENST00000434030 LPAP08519 4548 aa13.08□□□□□ -0.32
SEMA3B-205ENST00000434030 CRYGAP11844 174 aa13.08□□□□□ -0.32
SEMA3B-205ENST00000434030 COLCA2A8K830 154 aa13.07□□□□□ -0.32
SEMA3B-205ENST00000434030 SMIM13P0DJ93 91 aa13.07□□□□□ -0.32
SEMA3B-205ENST00000434030 FAM19A1Q7Z5A9 133 aa13.07□□□□□ -0.32
SEMA3B-205ENST00000434030 ANAPC11Q9NYG5 84 aa13.07□□□□□ -0.32
SEMA3B-205ENST00000434030 M0R378 163 aa13.06□□□□□ -0.32
SEMA3B-205ENST00000434030 PRLHP81277 87 aa13.06□□□□□ -0.32
SEMA3B-205ENST00000434030 RNF213Q63HN8 5207 aa13.06□□□□□ -0.32
SEMA3B-205ENST00000434030 HERV-K104P63124 156 aa13.05□□□□□ -0.32
SEMA3B-205ENST00000434030 MEIG1Q5JSS6 88 aa13.05□□□□□ -0.32
SEMA3B-205ENST00000434030 ATP6V1G1O75348 118 aa13.04□□□□□ -0.32
SEMA3B-205ENST00000434030 TYMSOSQ8TAI1 123 aa13.04□□□□□ -0.32
SEMA3B-205ENST00000434030 NDUFA12Q9UI09 145 aa13.04□□□□□ -0.32
SEMA3B-205ENST00000434030 FABP4P15090 132 aa13.02□□□□□ -0.33
SEMA3B-205ENST00000434030 MIR7-3HGQ8N6C7 128 aa13.02□□□□□ -0.33
SEMA3B-205ENST00000434030 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
SEMA3B-205ENST00000434030 MYMXA0A1B0GTQ4 84 aa13.01□□□□□ -0.33
SEMA3B-205ENST00000434030 KRTAP13-2Q52LG2 175 aa13.01□□□□□ -0.33
SEMA3B-205ENST00000434030 LINC00587B1AMM8 73 aa13□□□□□ -0.33
SEMA3B-205ENST00000434030 TSPAN13O95857 204 aa13□□□□□ -0.33
SEMA3B-205ENST00000434030 TSPEAR-AS2P59090 65 aa13□□□□□ -0.33
SEMA3B-205ENST00000434030 FAM229BQ4G0N7 80 aa13□□□□□ -0.33
SEMA3B-205ENST00000434030 BOD1L2Q8IYS8 172 aa13□□□□□ -0.33
SEMA3B-205ENST00000434030 LEPROTO15243 131 aa12.99□□□□□ -0.33
SEMA3B-205ENST00000434030 PLNP26678 52 aa12.99□□□□□ -0.33
SEMA3B-205ENST00000434030 PRR4Q16378 134 aa12.98□□□□□ -0.33
SEMA3B-205ENST00000434030 PMCHL2Q9BQD1 86 aa12.98□□□□□ -0.33
SEMA3B-205ENST00000434030 DPM2O94777 84 aa12.97□□□□□ -0.33
SEMA3B-205ENST00000434030 PLEKHB2Q96CS7 222 aa12.97□□□□□ -0.33
SEMA3B-205ENST00000434030 MAP1LC3CQ9BXW4 147 aa12.97□□□□□ -0.33
SEMA3B-205ENST00000434030 NCR3O14931 201 aa12.95□□□□□ -0.34
SEMA3B-205ENST00000434030 IGKCP01834 107 aa12.95□□□□□ -0.34
SEMA3B-205ENST00000434030 IGKV2D-26A0A0A0MRZ7 120 aa12.94□□□□□ -0.34
SEMA3B-205ENST00000434030 J3QQQ9 107 aa12.94□□□□□ -0.34
SEMA3B-205ENST00000434030 HIGD2AQ9BW72 106 aa12.94□□□□□ -0.34
SEMA3B-205ENST00000434030 HERVK_113P61574 105 aa12.93□□□□□ -0.34
SEMA3B-205ENST00000434030 PRYO14603 147 aa12.92□□□□□ -0.34
SEMA3B-205ENST00000434030 DAND5Q8N907 189 aa12.92□□□□□ -0.34
SEMA3B-205ENST00000434030 KCNQ1DNQ9H478 68 aa12.92□□□□□ -0.34
SEMA3B-205ENST00000434030 LOC107984156A0A0G2JMH3 177 aa12.91□□□□□ -0.34
SEMA3B-205ENST00000434030 ARL17AQ8IVW1 177 aa12.91□□□□□ -0.34
SEMA3B-205ENST00000434030 SPRR1AP35321 89 aa12.9□□□□□ -0.34
SEMA3B-205ENST00000434030 NMUP48645 174 aa12.9□□□□□ -0.34
SEMA3B-205ENST00000434030 LGALS3P17931 250 aaKnown RBP12.89□□□□□ -0.35
SEMA3B-205ENST00000434030 TRBV10-3A0A0K0K1G6 114 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BBP33778 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BDP58876 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BCP62807 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST2H2BEQ16778 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 LINC00337Q8N6G1 96 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 LINC00304Q8N9R0 145 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
SEMA3B-205ENST00000434030 KRTAP4-16G5E9R7 235 aaPredicted RBP12.87□□□□□ -0.35
SEMA3B-205ENST00000434030 SPRR4Q96PI1 79 aa12.87□□□□□ -0.35
SEMA3B-205ENST00000434030 C3orf22Q8N5N4 141 aa12.86□□□□□ -0.35
SEMA3B-205ENST00000434030 TRBV10-2A0A0K0K1G8 114 aa12.84□□□□□ -0.35
SEMA3B-205ENST00000434030 ETDCA0A1B0GVM5 59 aa12.84□□□□□ -0.35
SEMA3B-205ENST00000434030 E9PLD3 99 aa12.83□□□□□ -0.36
SEMA3B-205ENST00000434030 SYS1-DBNDD2H3BUS1 97 aa12.83□□□□□ -0.36
SEMA3B-205ENST00000434030 SMCR5Q8TEV8 140 aa12.83□□□□□ -0.36
SEMA3B-205ENST00000434030 MIEN1Q9BRT3 115 aa12.82□□□□□ -0.36
SEMA3B-205ENST00000434030 ZNF706Q9Y5V0 76 aaPredicted RBP12.82□□□□□ -0.36
SEMA3B-205ENST00000434030 A0A0J9YXY3 114 aa12.81□□□□□ -0.36
SEMA3B-205ENST00000434030 DDTP30046 118 aa12.81□□□□□ -0.36
SEMA3B-205ENST00000434030 S100A12P80511 92 aa12.81□□□□□ -0.36
SEMA3B-205ENST00000434030 SPANXB1Q9NS25 103 aaPredicted RBP12.8□□□□□ -0.36
SEMA3B-205ENST00000434030 NDUFC2O95298 119 aa12.79□□□□□ -0.36
SEMA3B-205ENST00000434030 CTAG1AP78358 180 aa12.79□□□□□ -0.36
SEMA3B-205ENST00000434030 ADAMTSL4-AS1Q5T5F5 129 aa12.79□□□□□ -0.36
SEMA3B-205ENST00000434030 RETNLBQ9BQ08 111 aa12.79□□□□□ -0.36
SEMA3B-205ENST00000434030 B5MCH6 92 aa12.78□□□□□ -0.36
SEMA3B-205ENST00000434030 SOSTDC1Q6X4U4 206 aa12.78□□□□□ -0.36
SEMA3B-205ENST00000434030 EIF4EBP3O60516 100 aaPredicted RBP12.77□□□□□ -0.37
SEMA3B-205ENST00000434030 NPC2P61916 151 aa12.77□□□□□ -0.37
SEMA3B-205ENST00000434030 LINC01545Q5VT33 79 aa12.77□□□□□ -0.37
SEMA3B-205ENST00000434030 PET117Q6UWS5 81 aa12.76□□□□□ -0.37
SEMA3B-205ENST00000434030 IGLV6-57P01721 117 aa12.75□□□□□ -0.37
SEMA3B-205ENST00000434030 S100A7L2Q5SY68 101 aa12.75□□□□□ -0.37
SEMA3B-205ENST00000434030 PPDPFQ9H3Y8 114 aa12.75□□□□□ -0.37
SEMA3B-205ENST00000434030 ERC2-IT1O76042 136 aa12.73□□□□□ -0.37
SEMA3B-205ENST00000434030 SPAG11AQ6PDA7 123 aa12.73□□□□□ -0.37
SEMA3B-205ENST00000434030 C3orf79P0CE67 100 aa12.72□□□□□ -0.37
SEMA3B-205ENST00000434030 LINC00483Q53H64 154 aa12.72□□□□□ -0.37
SEMA3B-205ENST00000434030 Q6ZRX8 168 aa12.72□□□□□ -0.37
SEMA3B-205ENST00000434030 Q9BRP9 147 aa12.72□□□□□ -0.37
SEMA3B-205ENST00000434030 COA6Q5JTJ3 125 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms