RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
DDR1-235ENST00000428153 ZNF625Q96I27 306 aaPredicted RBP10.04□□□□□ -0.8
DDR1-235ENST00000428153 MUC17Q685J3 4493 aa10.04□□□□□ -0.8
DDR1-235ENST00000428153 C10orf91Q5T1B1 145 aa10.03□□□□□ -0.8
DDR1-235ENST00000428153 C18orf32Q8TCD1 76 aa10.03□□□□□ -0.8
DDR1-235ENST00000428153 URB1-AS1Q96HZ7 61 aa10.03□□□□□ -0.8
DDR1-235ENST00000428153 C11orf86A6NJI1 115 aa10.02□□□□□ -0.81
DDR1-235ENST00000428153 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
DDR1-235ENST00000428153 Q8NDZ9 215 aa10.01□□□□□ -0.81
DDR1-235ENST00000428153 KRTAP9-2Q9BYQ4 174 aa10.01□□□□□ -0.81
DDR1-235ENST00000428153 BAGE3Q86Y29 109 aa10□□□□□ -0.81
DDR1-235ENST00000428153 SLC7A5P1Q8MH63 180 aa10□□□□□ -0.81
DDR1-235ENST00000428153 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
DDR1-235ENST00000428153 HIGD2AQ9BW72 106 aa9.99□□□□□ -0.81
DDR1-235ENST00000428153 RPS10P5Q9NQ39 176 aa9.99□□□□□ -0.81
DDR1-235ENST00000428153 TRAPPC1Q9Y5R8 145 aa9.99□□□□□ -0.81
DDR1-235ENST00000428153 NDUFA5Q16718 116 aa9.98□□□□□ -0.81
DDR1-235ENST00000428153 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
DDR1-235ENST00000428153 C3orf22Q8N5N4 141 aa9.98□□□□□ -0.81
DDR1-235ENST00000428153 SPRR4Q96PI1 79 aa9.98□□□□□ -0.81
DDR1-235ENST00000428153 LINC00158P58513 81 aa9.97□□□□□ -0.81
DDR1-235ENST00000428153 PPDPFQ9H3Y8 114 aa9.97□□□□□ -0.81
DDR1-235ENST00000428153 PRYO14603 147 aa9.96□□□□□ -0.82
DDR1-235ENST00000428153 PMCHL1Q16048 86 aa9.96□□□□□ -0.82
DDR1-235ENST00000428153 TRAV12-1A0A0B4J245 112 aa9.95□□□□□ -0.82
DDR1-235ENST00000428153 APOC3P02656 99 aa9.95□□□□□ -0.82
DDR1-235ENST00000428153 LINC00337Q8N6G1 96 aa9.95□□□□□ -0.82
DDR1-235ENST00000428153 CHTOPQ9Y3Y2 248 aaKnown RBP9.95□□□□□ -0.82
DDR1-235ENST00000428153 TMEM223A0PJW6 202 aa9.94□□□□□ -0.82
DDR1-235ENST00000428153 SPRR1AP35321 89 aa9.94□□□□□ -0.82
DDR1-235ENST00000428153 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
DDR1-235ENST00000428153 SVBPQ8N300 66 aa9.94□□□□□ -0.82
DDR1-235ENST00000428153 LINC00587B1AMM8 73 aa9.93□□□□□ -0.82
DDR1-235ENST00000428153 SNAPINO95295 136 aa9.93□□□□□ -0.82
DDR1-235ENST00000428153 KCNQ1DNQ9H478 68 aa9.93□□□□□ -0.82
DDR1-235ENST00000428153 HERV-K104P63124 156 aa9.92□□□□□ -0.82
DDR1-235ENST00000428153 ATP6V1G1O75348 118 aa9.91□□□□□ -0.82
DDR1-235ENST00000428153 CHCHD1Q96BP2 118 aaKnown RBP9.91□□□□□ -0.82
DDR1-235ENST00000428153 KRTAP4-16G5E9R7 235 aaPredicted RBP9.9□□□□□ -0.82
DDR1-235ENST00000428153 SPINK1P00995 79 aa9.9□□□□□ -0.82
DDR1-235ENST00000428153 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
DDR1-235ENST00000428153 A0A0U1RRA0 63 aa9.89□□□□□ -0.83
DDR1-235ENST00000428153 SMIM13P0DJ93 91 aa9.89□□□□□ -0.83
DDR1-235ENST00000428153 IFI27L1Q96BM0 104 aa9.89□□□□□ -0.83
DDR1-235ENST00000428153 LINC00483Q53H64 154 aa9.88□□□□□ -0.83
DDR1-235ENST00000428153 MEIG1Q5JSS6 88 aa9.88□□□□□ -0.83
DDR1-235ENST00000428153 MIR7-3HGQ8N6C7 128 aa9.88□□□□□ -0.83
DDR1-235ENST00000428153 S100A12P80511 92 aa9.87□□□□□ -0.83
DDR1-235ENST00000428153 Q8NBF4 154 aa9.87□□□□□ -0.83
DDR1-235ENST00000428153 SMCR5Q8TEV8 140 aa9.87□□□□□ -0.83
DDR1-235ENST00000428153 ETDCA0A1B0GVM5 59 aa9.86□□□□□ -0.83
DDR1-235ENST00000428153 RPS29P62273 56 aaKnown RBP9.86□□□□□ -0.83
DDR1-235ENST00000428153 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
DDR1-235ENST00000428153 MAP1LC3CQ9BXW4 147 aa9.86□□□□□ -0.83
DDR1-235ENST00000428153 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
DDR1-235ENST00000428153 LOC107984156A0A0G2JMH3 177 aa9.84□□□□□ -0.83
DDR1-235ENST00000428153 NCR3O14931 201 aa9.84□□□□□ -0.83
DDR1-235ENST00000428153 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
DDR1-235ENST00000428153 ARL17AQ8IVW1 177 aa9.84□□□□□ -0.83
DDR1-235ENST00000428153 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
DDR1-235ENST00000428153 KRTAP9-6A0A140TA67 174 aa9.83□□□□□ -0.84
DDR1-235ENST00000428153 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
DDR1-235ENST00000428153 DAND5Q8N907 189 aa9.83□□□□□ -0.84
DDR1-235ENST00000428153 TRBV10-2A0A0K0K1G8 114 aa9.82□□□□□ -0.84
DDR1-235ENST00000428153 SSBP3-AS1Q7Z2R9 100 aa9.82□□□□□ -0.84
DDR1-235ENST00000428153 FAM19A2Q8N3H0 131 aa9.82□□□□□ -0.84
DDR1-235ENST00000428153 B5MCH6 92 aa9.8□□□□□ -0.84
DDR1-235ENST00000428153 YPEL4Q96NS1 127 aa9.8□□□□□ -0.84
DDR1-235ENST00000428153 HSBP1O75506 76 aa9.79□□□□□ -0.84
DDR1-235ENST00000428153 SEC61BP60468 96 aaKnown RBP9.78□□□□□ -0.84
DDR1-235ENST00000428153 GAGE2AQ6NT46 116 aa9.78□□□□□ -0.84
DDR1-235ENST00000428153 DDTP30046 118 aa9.77□□□□□ -0.85
DDR1-235ENST00000428153 LEPROTO15243 131 aa9.76□□□□□ -0.85
DDR1-235ENST00000428153 Q6ZRX8 168 aa9.76□□□□□ -0.85
DDR1-235ENST00000428153 Q8N377 158 aa9.76□□□□□ -0.85
DDR1-235ENST00000428153 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
DDR1-235ENST00000428153 SLC25A20O43772 301 aa9.75□□□□□ -0.85
DDR1-235ENST00000428153 NDUFC2O95298 119 aa9.75□□□□□ -0.85
DDR1-235ENST00000428153 PLNP26678 52 aa9.75□□□□□ -0.85
DDR1-235ENST00000428153 NMUP48645 174 aa9.75□□□□□ -0.85
DDR1-235ENST00000428153 MOBPQ13875 183 aa9.75□□□□□ -0.85
DDR1-235ENST00000428153 ERC2-IT1O76042 136 aa9.74□□□□□ -0.85
DDR1-235ENST00000428153 JOSD1Q15040 202 aaPredicted RBP9.74□□□□□ -0.85
DDR1-235ENST00000428153 Q9BRP9 147 aa9.74□□□□□ -0.85
DDR1-235ENST00000428153 MIEN1Q9BRT3 115 aa9.74□□□□□ -0.85
DDR1-235ENST00000428153 IGLV9-49A0A0B4J1Y8 123 aa9.73□□□□□ -0.85
DDR1-235ENST00000428153 LEPROTL1O95214 131 aa9.73□□□□□ -0.85
DDR1-235ENST00000428153 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
DDR1-235ENST00000428153 LINC01547P58512 204 aaPredicted RBP9.73□□□□□ -0.85
DDR1-235ENST00000428153 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
DDR1-235ENST00000428153 C5orf52A6NGY3 159 aa9.72□□□□□ -0.85
DDR1-235ENST00000428153 J3QQQ9 107 aa9.72□□□□□ -0.85
DDR1-235ENST00000428153 HERVK_113P61574 105 aa9.71□□□□□ -0.86
DDR1-235ENST00000428153 H0Y8G0 127 aa9.7□□□□□ -0.86
DDR1-235ENST00000428153 S100A7L2Q5SY68 101 aa9.7□□□□□ -0.86
DDR1-235ENST00000428153 CBY1Q9Y3M2 126 aa9.7□□□□□ -0.86
DDR1-235ENST00000428153 XP32Q5T750 250 aa9.69□□□□□ -0.86
DDR1-235ENST00000428153 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
DDR1-235ENST00000428153 TRAV23DV6A0A075B6W5 121 aa9.68□□□□□ -0.86
DDR1-235ENST00000428153 DPM2O94777 84 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms