RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SLPIP03973 132 aa11.4□□□□□ -0.58
FN1-208ENST00000426059 Q8NDZ9 215 aa11.4□□□□□ -0.58
FN1-208ENST00000426059 MTURNQ8N3F0 131 aa11.39□□□□□ -0.59
FN1-208ENST00000426059 C2orf48Q96LS8 159 aa11.39□□□□□ -0.59
FN1-208ENST00000426059 XAGE1AQ9HD64 81 aa11.39□□□□□ -0.59
FN1-208ENST00000426059 VPS13DQ5THJ4 4388 aa11.39□□□□□ -0.59
FN1-208ENST00000426059 NBDYA0A0U1RRE5 68 aa11.39□□□□□ -0.59
FN1-208ENST00000426059 TRIAP1O43715 76 aa11.38□□□□□ -0.59
FN1-208ENST00000426059 SCGB1C2P0DMR2 95 aa11.38□□□□□ -0.59
FN1-208ENST00000426059 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
FN1-208ENST00000426059 PRO0461Q9UI25 63 aa11.38□□□□□ -0.59
FN1-208ENST00000426059 TRBV30A0A0K0K1B3 111 aa11.38□□□□□ -0.59
FN1-208ENST00000426059 PSCAO43653 123 aa11.38□□□□□ -0.59
FN1-208ENST00000426059 PPDPFQ9H3Y8 114 aa11.38□□□□□ -0.59
FN1-208ENST00000426059 KMT2AQ03164 3969 aa11.36□□□□□ -0.59
FN1-208ENST00000426059 TCL1BO95988 128 aa11.35□□□□□ -0.59
FN1-208ENST00000426059 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
FN1-208ENST00000426059 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
FN1-208ENST00000426059 OR13C6PQ8NH95 151 aa11.34□□□□□ -0.59
FN1-208ENST00000426059 NCR3O14931 201 aa11.34□□□□□ -0.59
FN1-208ENST00000426059 Q6ZRP5 223 aa11.33□□□□□ -0.6
FN1-208ENST00000426059 CARD19Q96LW7 228 aa11.33□□□□□ -0.6
FN1-208ENST00000426059 TRAV13-2A0A0B4J235 113 aa11.33□□□□□ -0.6
FN1-208ENST00000426059 TTC32Q5I0X7 151 aa11.32□□□□□ -0.6
FN1-208ENST00000426059 WWC2-AS2Q96NR7 200 aa11.32□□□□□ -0.6
FN1-208ENST00000426059 NDUFC2-KCTD14E9PQ53 114 aa11.32□□□□□ -0.6
FN1-208ENST00000426059 CLEC2BQ92478 149 aa11.31□□□□□ -0.6
FN1-208ENST00000426059 RPL18AQ02543 176 aaKnown RBP11.3□□□□□ -0.6
FN1-208ENST00000426059 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.29□□□□□ -0.6
FN1-208ENST00000426059 NDUFC2O95298 119 aa11.29□□□□□ -0.6
FN1-208ENST00000426059 SMIM11BQ8TCY0 68 aa11.29□□□□□ -0.6
FN1-208ENST00000426059 LY6G6CO95867 125 aa11.28□□□□□ -0.6
FN1-208ENST00000426059 LYRM7Q5U5X0 104 aa11.28□□□□□ -0.6
FN1-208ENST00000426059 F8WDY8 70 aa11.28□□□□□ -0.6
FN1-208ENST00000426059 SMCPP49901 116 aaPredicted RBP11.27□□□□□ -0.6
FN1-208ENST00000426059 Q6ZRN7 208 aaPredicted RBP11.27□□□□□ -0.6
FN1-208ENST00000426059 COX6CP09669 75 aa11.26□□□□□ -0.61
FN1-208ENST00000426059 C9orf129Q5T035 196 aaKnown RBP11.26□□□□□ -0.61
FN1-208ENST00000426059 CDIP1Q9H305 208 aa11.26□□□□□ -0.61
FN1-208ENST00000426059 TRBV20-1A0A075B6N2 111 aa11.25□□□□□ -0.61
FN1-208ENST00000426059 RPL28P46779 137 aaKnown RBP11.24□□□□□ -0.61
FN1-208ENST00000426059 LRCOL1A6NCL2 159 aa11.24□□□□□ -0.61
FN1-208ENST00000426059 S100A7L2Q5SY68 101 aa11.24□□□□□ -0.61
FN1-208ENST00000426059 GAGE2BQ13066 116 aa11.23□□□□□ -0.61
FN1-208ENST00000426059 DNAH2Q9P225 4427 aa11.23□□□□□ -0.61
FN1-208ENST00000426059 VPREB1P12018 145 aa11.23□□□□□ -0.61
FN1-208ENST00000426059 Q6ZR54 194 aa11.22□□□□□ -0.61
FN1-208ENST00000426059 MT-ATP8P03928 68 aa11.21□□□□□ -0.61
FN1-208ENST00000426059 ATXN8Q156A1 80 aa11.21□□□□□ -0.61
FN1-208ENST00000426059 FAM218AQ96MZ4 157 aa11.21□□□□□ -0.61
FN1-208ENST00000426059 TMEM126AQ9H061 195 aa11.21□□□□□ -0.61
FN1-208ENST00000426059 FAM168BA1KXE4 195 aa11.21□□□□□ -0.62
FN1-208ENST00000426059 TLX1NBP0CAT3 122 aa11.21□□□□□ -0.62
FN1-208ENST00000426059 LINC01620Q4KN68 170 aa11.21□□□□□ -0.62
FN1-208ENST00000426059 PPDPFLQ8WWR9 84 aa11.21□□□□□ -0.62
FN1-208ENST00000426059 SERTAD4-AS1Q5TG53 156 aa11.2□□□□□ -0.62
FN1-208ENST00000426059 C9JAW5 83 aa11.2□□□□□ -0.62
FN1-208ENST00000426059 XGP55808 180 aa11.2□□□□□ -0.62
FN1-208ENST00000426059 TEN1Q86WV5 123 aa11.2□□□□□ -0.62
FN1-208ENST00000426059 LINC00476Q8WZB0 136 aa11.2□□□□□ -0.62
FN1-208ENST00000426059 TRBV10-3A0A0K0K1G6 114 aa11.19□□□□□ -0.62
FN1-208ENST00000426059 SVIPQ8NHG7 77 aa11.19□□□□□ -0.62
FN1-208ENST00000426059 LST1O00453 97 aa11.19□□□□□ -0.62
FN1-208ENST00000426059 FUSP35637 526 aaKnown RBP eCLIP11.18□□□□□ -0.62
FN1-208ENST00000426059 CNBPP62633 177 aaKnown RBP11.18□□□□□ -0.62
FN1-208ENST00000426059 LOC107984640A0A0U1RRK4 108 aa11.17□□□□□ -0.62
FN1-208ENST00000426059 IGLV6-57P01721 117 aa11.17□□□□□ -0.62
FN1-208ENST00000426059 C14orf177Q52M58 125 aa11.17□□□□□ -0.62
FN1-208ENST00000426059 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
FN1-208ENST00000426059 TRBV10-2A0A0K0K1G8 114 aa11.16□□□□□ -0.62
FN1-208ENST00000426059 A0A087WYN8 130 aa11.16□□□□□ -0.62
FN1-208ENST00000426059 C6orf99Q4VX62 202 aa11.16□□□□□ -0.62
FN1-208ENST00000426059 A0A096LNI7 61 aa11.15□□□□□ -0.62
FN1-208ENST00000426059 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
FN1-208ENST00000426059 HYDINQ4G0P3 5121 aa11.14□□□□□ -0.63
FN1-208ENST00000426059 C3orf84H3BNL1 204 aa11.14□□□□□ -0.63
FN1-208ENST00000426059 SLC25A20O43772 301 aa11.14□□□□□ -0.63
FN1-208ENST00000426059 M0R378 163 aa11.13□□□□□ -0.63
FN1-208ENST00000426059 Q8N814 137 aa11.13□□□□□ -0.63
FN1-208ENST00000426059 A0A087WTM6 91 aa11.13□□□□□ -0.63
FN1-208ENST00000426059 C1orf134Q5TEV5 83 aa11.13□□□□□ -0.63
FN1-208ENST00000426059 FAM19A5Q7Z5A7 132 aaPredicted RBP11.13□□□□□ -0.63
FN1-208ENST00000426059 ANKRD29Q8N6D5 301 aa11.13□□□□□ -0.63
FN1-208ENST00000426059 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
FN1-208ENST00000426059 TRAV23DV6A0A075B6W5 121 aa11.11□□□□□ -0.63
FN1-208ENST00000426059 CHTF8P0CG12 524 aa11.11□□□□□ -0.63
FN1-208ENST00000426059 C7orf33Q8WU49 177 aa11.11□□□□□ -0.63
FN1-208ENST00000426059 H0YGX0 51 aa11.1□□□□□ -0.63
FN1-208ENST00000426059 C9orf163Q8N9P6 203 aa11.1□□□□□ -0.63
FN1-208ENST00000426059 RPL37AP8A6NKH3 93 aa11.09□□□□□ -0.63
FN1-208ENST00000426059 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
FN1-208ENST00000426059 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
FN1-208ENST00000426059 ALMS1Q8TCU4 4167 aa11.08□□□□□ -0.64
FN1-208ENST00000426059 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
FN1-208ENST00000426059 PLA2G2DQ9UNK4 145 aa11.08□□□□□ -0.64
FN1-208ENST00000426059 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
FN1-208ENST00000426059 ZNF73O43830 326 aaPredicted RBP11.07□□□□□ -0.64
FN1-208ENST00000426059 TRACP01848 142 aa11.07□□□□□ -0.64
FN1-208ENST00000426059 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
FN1-208ENST00000426059 M0QXV9 152 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 302.4 ms