RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 LINC01620Q4KN68 170 aa17.45■□□□□ 0.38
LDB1-202ENST00000425280 CBY1Q9Y3M2 126 aa17.45■□□□□ 0.38
LDB1-202ENST00000425280 LYSTQ99698 3801 aa17.45■□□□□ 0.38
LDB1-202ENST00000425280 C9JAW5 83 aa17.44■□□□□ 0.38
LDB1-202ENST00000425280 USP17L23D6RBM5 183 aa17.44■□□□□ 0.38
LDB1-202ENST00000425280 SYCNQ0VAF6 134 aa17.43■□□□□ 0.38
LDB1-202ENST00000425280 ETDBQ3ZM63 59 aa17.42■□□□□ 0.38
LDB1-202ENST00000425280 DNAH7Q8WXX0 4024 aa17.42■□□□□ 0.38
LDB1-202ENST00000425280 XAGE1AQ9HD64 81 aa17.41■□□□□ 0.38
LDB1-202ENST00000425280 NCR3O14931 201 aa17.4■□□□□ 0.38
LDB1-202ENST00000425280 SLC25A20O43772 301 aa17.4■□□□□ 0.38
LDB1-202ENST00000425280 NDUFC2-KCTD14E9PQ53 114 aa17.38■□□□□ 0.37
LDB1-202ENST00000425280 SLPIP03973 132 aa17.36■□□□□ 0.37
LDB1-202ENST00000425280 PLECQ15149 4684 aaKnown RBP17.36■□□□□ 0.37
LDB1-202ENST00000425280 LECT2O14960 151 aa17.35■□□□□ 0.37
LDB1-202ENST00000425280 CARD19Q96LW7 228 aa17.35■□□□□ 0.37
LDB1-202ENST00000425280 TMEM126AQ9H061 195 aa17.35■□□□□ 0.37
LDB1-202ENST00000425280 TRBV10-2A0A0K0K1G8 114 aa17.35■□□□□ 0.37
LDB1-202ENST00000425280 FAM218AQ96MZ4 157 aa17.35■□□□□ 0.37
LDB1-202ENST00000425280 M0QXV9 152 aa17.33■□□□□ 0.37
LDB1-202ENST00000425280 K7ERU9 68 aa17.33■□□□□ 0.36
LDB1-202ENST00000425280 Q6ZRP5 223 aa17.33■□□□□ 0.36
LDB1-202ENST00000425280 ANKRD29Q8N6D5 301 aa17.32■□□□□ 0.36
LDB1-202ENST00000425280 RNF151Q2KHN1 245 aa17.32■□□□□ 0.36
LDB1-202ENST00000425280 GAGE2EQ4V326 116 aa17.32■□□□□ 0.36
LDB1-202ENST00000425280 GAGE2DQ9UEU5 116 aa17.32■□□□□ 0.36
LDB1-202ENST00000425280 STARD9Q9P2P6 4700 aa17.31■□□□□ 0.36
LDB1-202ENST00000425280 RPL18AQ02543 176 aaKnown RBP17.3■□□□□ 0.36
LDB1-202ENST00000425280 S100A7L2Q5SY68 101 aa17.3■□□□□ 0.36
LDB1-202ENST00000425280 LINC01600Q96MT4 127 aa17.3■□□□□ 0.36
LDB1-202ENST00000425280 H0YGX0 51 aa17.29■□□□□ 0.36
LDB1-202ENST00000425280 TRACP01848 142 aa17.29■□□□□ 0.36
LDB1-202ENST00000425280 TEN1Q86WV5 123 aa17.29■□□□□ 0.36
LDB1-202ENST00000425280 TENM2Q9NT68 2774 aa17.29■□□□□ 0.36
LDB1-202ENST00000425280 VPREB1P12018 145 aa17.27■□□□□ 0.36
LDB1-202ENST00000425280 NBDYA0A0U1RRE5 68 aa17.27■□□□□ 0.35
LDB1-202ENST00000425280 IGLV6-57P01721 117 aa17.27■□□□□ 0.35
LDB1-202ENST00000425280 TLX1NBP0CAT3 122 aa17.27■□□□□ 0.35
LDB1-202ENST00000425280 H3BT86 120 aa17.25■□□□□ 0.35
LDB1-202ENST00000425280 TTC32Q5I0X7 151 aa17.25■□□□□ 0.35
LDB1-202ENST00000425280 PSCAO43653 123 aa17.25■□□□□ 0.35
LDB1-202ENST00000425280 A0A087WYN8 130 aa17.24■□□□□ 0.35
LDB1-202ENST00000425280 C9orf129Q5T035 196 aaKnown RBP17.24■□□□□ 0.35
LDB1-202ENST00000425280 TRBV10-3A0A0K0K1G6 114 aa17.2■□□□□ 0.34
LDB1-202ENST00000425280 DNAH10Q8IVF4 4471 aa17.2■□□□□ 0.34
LDB1-202ENST00000425280 PPDPFLQ8WWR9 84 aa17.2■□□□□ 0.34
LDB1-202ENST00000425280 FBN3Q75N90 2809 aa17.2■□□□□ 0.34
LDB1-202ENST00000425280 C6orf99Q4VX62 202 aa17.19■□□□□ 0.34
LDB1-202ENST00000425280 M0R378 163 aa17.17■□□□□ 0.34
LDB1-202ENST00000425280 VPS13DQ5THJ4 4388 aa17.16■□□□□ 0.34
LDB1-202ENST00000425280 J3QR89 54 aa17.16■□□□□ 0.34
LDB1-202ENST00000425280 PCP4P48539 62 aa17.16■□□□□ 0.34
LDB1-202ENST00000425280 BAALC-AS2P0C853 105 aa17.14■□□□□ 0.33
LDB1-202ENST00000425280 TRAV23DV6A0A075B6W5 121 aa17.13■□□□□ 0.33
LDB1-202ENST00000425280 DNAL4O96015 105 aa17.13■□□□□ 0.33
LDB1-202ENST00000425280 SERTAD4-AS1Q5TG53 156 aa17.13■□□□□ 0.33
LDB1-202ENST00000425280 LOC107984640A0A0U1RRK4 108 aa17.12■□□□□ 0.33
LDB1-202ENST00000425280 CNBPP62633 177 aaKnown RBP17.12■□□□□ 0.33
LDB1-202ENST00000425280 Q6ZRN7 208 aaPredicted RBP17.12■□□□□ 0.33
LDB1-202ENST00000425280 TEX49A0A1B0GTD5 131 aa17.12■□□□□ 0.33
LDB1-202ENST00000425280 GAGE2BQ13066 116 aa17.12■□□□□ 0.33
LDB1-202ENST00000425280 C21orf62-AS1Q17RA5 79 aa17.12■□□□□ 0.33
LDB1-202ENST00000425280 C14orf177Q52M58 125 aa17.11■□□□□ 0.33
LDB1-202ENST00000425280 PLA2G2DQ9UNK4 145 aa17.11■□□□□ 0.33
LDB1-202ENST00000425280 M0R2N4 97 aa17.1■□□□□ 0.33
LDB1-202ENST00000425280 A0A1B0GX51 115 aa17.09■□□□□ 0.33
LDB1-202ENST00000425280 LRCOL1A6NCL2 159 aa17.09■□□□□ 0.33
LDB1-202ENST00000425280 C22orf24Q9Y442 160 aa17.09■□□□□ 0.33
LDB1-202ENST00000425280 Q8N814 137 aa17.08■□□□□ 0.33
LDB1-202ENST00000425280 NKAPP1Q8N9T2 125 aa17.08■□□□□ 0.32
LDB1-202ENST00000425280 VPS25Q9BRG1 176 aa17.08■□□□□ 0.32
LDB1-202ENST00000425280 FAM168BA1KXE4 195 aa17.07■□□□□ 0.32
LDB1-202ENST00000425280 DIRC1Q969H9 104 aa17.07■□□□□ 0.32
LDB1-202ENST00000425280 ZNF73O43830 326 aaPredicted RBP17.06■□□□□ 0.32
LDB1-202ENST00000425280 LINC00167Q96N53 147 aa17.06■□□□□ 0.32
LDB1-202ENST00000425280 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.06■□□□□ 0.32
LDB1-202ENST00000425280 LINC00575Q6W349 94 aa17.06■□□□□ 0.32
LDB1-202ENST00000425280 C7orf33Q8WU49 177 aa17.05■□□□□ 0.32
LDB1-202ENST00000425280 IGLV5-37A0A075B6J1 123 aa17.04■□□□□ 0.32
LDB1-202ENST00000425280 KRTAP7-1Q8IUC3 87 aa17.03■□□□□ 0.32
LDB1-202ENST00000425280 Q6ZR54 194 aa17■□□□□ 0.31
LDB1-202ENST00000425280 ORMDL1Q9P0S3 153 aa17■□□□□ 0.31
LDB1-202ENST00000425280 TRBV7-6A0A0J9YX20 115 aa16.99■□□□□ 0.31
LDB1-202ENST00000425280 WWC2-AS2Q96NR7 200 aa16.99■□□□□ 0.31
LDB1-202ENST00000425280 A0A096LNI7 61 aa16.98■□□□□ 0.31
LDB1-202ENST00000425280 SNCGO76070 127 aa16.98■□□□□ 0.31
LDB1-202ENST00000425280 COX7BP24311 80 aa16.98■□□□□ 0.31
LDB1-202ENST00000425280 hADV29S1A0JD25 119 aa16.98■□□□□ 0.31
LDB1-202ENST00000425280 C16orf90A8MZG2 172 aa16.97■□□□□ 0.31
LDB1-202ENST00000425280 ELOF1P60002 83 aaKnown RBP16.97■□□□□ 0.31
LDB1-202ENST00000425280 FAM19A5Q7Z5A7 132 aaPredicted RBP16.97■□□□□ 0.31
LDB1-202ENST00000425280 KCNQ1DNQ9H478 68 aa16.97■□□□□ 0.31
LDB1-202ENST00000425280 TGP01266 2768 aa16.94■□□□□ 0.3
LDB1-202ENST00000425280 IGKV2-24A0A0C4DH68 120 aa16.93■□□□□ 0.3
LDB1-202ENST00000425280 C9orf163Q8N9P6 203 aa16.93■□□□□ 0.3
LDB1-202ENST00000425280 IGLV1-50A0A075B6I6 118 aa16.92■□□□□ 0.3
LDB1-202ENST00000425280 RPL37AP8A6NKH3 93 aa16.92■□□□□ 0.3
LDB1-202ENST00000425280 KMT2AQ03164 3969 aa16.91■□□□□ 0.3
LDB1-202ENST00000425280 MRPL55Q7Z7F7 128 aaKnown RBP16.91■□□□□ 0.3
LDB1-202ENST00000425280 LY6G6CO95867 125 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms