RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 MIR7-3HGQ8N6C7 128 aa12.86□□□□□ -0.35
PMS1-211ENST00000424766 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
PMS1-211ENST00000424766 TP73-AS1Q9UF72 201 aa12.85□□□□□ -0.35
PMS1-211ENST00000424766 C22orf24Q9Y442 160 aa12.85□□□□□ -0.35
PMS1-211ENST00000424766 IGLV5-37A0A075B6J1 123 aa12.84□□□□□ -0.35
PMS1-211ENST00000424766 LBHQ53QV2 105 aaPredicted RBP12.83□□□□□ -0.36
PMS1-211ENST00000424766 TTTY13Q9BZ97 58 aa12.83□□□□□ -0.36
PMS1-211ENST00000424766 HERC2O95714 4834 aa12.83□□□□□ -0.36
PMS1-211ENST00000424766 TIMM17BO60830 172 aa12.82□□□□□ -0.36
PMS1-211ENST00000424766 KRTAP10-4P60372 401 aaPredicted RBP12.82□□□□□ -0.36
PMS1-211ENST00000424766 RPL24P83731 157 aaKnown RBP12.82□□□□□ -0.36
PMS1-211ENST00000424766 JOSD1Q15040 202 aaPredicted RBP12.82□□□□□ -0.36
PMS1-211ENST00000424766 LOC107984156A0A0G2JMH3 177 aa12.81□□□□□ -0.36
PMS1-211ENST00000424766 ARL17AQ8IVW1 177 aa12.81□□□□□ -0.36
PMS1-211ENST00000424766 VPREB1P12018 145 aa12.8□□□□□ -0.36
PMS1-211ENST00000424766 MRPL55Q7Z7F7 128 aaKnown RBP12.8□□□□□ -0.36
PMS1-211ENST00000424766 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
PMS1-211ENST00000424766 PCP2Q8IVA1 136 aa12.79□□□□□ -0.36
PMS1-211ENST00000424766 ADAMTSL4-AS1Q5T5F5 129 aa12.78□□□□□ -0.36
PMS1-211ENST00000424766 DAND5Q8N907 189 aa12.78□□□□□ -0.36
PMS1-211ENST00000424766 UBE2BP63146 152 aa12.77□□□□□ -0.37
PMS1-211ENST00000424766 PRR3P79522 188 aaKnown RBP12.77□□□□□ -0.37
PMS1-211ENST00000424766 BOD1L2Q8IYS8 172 aa12.77□□□□□ -0.37
PMS1-211ENST00000424766 LITAFQ99732 161 aa12.77□□□□□ -0.37
PMS1-211ENST00000424766 SCGB1D4Q6XE38 83 aa12.76□□□□□ -0.37
PMS1-211ENST00000424766 Q8NDZ9 215 aa12.76□□□□□ -0.37
PMS1-211ENST00000424766 LINC00167Q96N53 147 aa12.76□□□□□ -0.37
PMS1-211ENST00000424766 PSORS1C2Q9UIG4 136 aa12.76□□□□□ -0.37
PMS1-211ENST00000424766 KRTAP11-1Q8IUC1 163 aa12.75□□□□□ -0.37
PMS1-211ENST00000424766 MIEN1Q9BRT3 115 aa12.74□□□□□ -0.37
PMS1-211ENST00000424766 INAFM2P0DMQ5 153 aa12.73□□□□□ -0.37
PMS1-211ENST00000424766 TMEM238C9JI98 176 aa12.72□□□□□ -0.37
PMS1-211ENST00000424766 M0R378 163 aa12.72□□□□□ -0.37
PMS1-211ENST00000424766 SRRM2Q9UQ35 2752 aaKnown RBP12.72□□□□□ -0.37
PMS1-211ENST00000424766 GAGE10A6NGK3 116 aa12.71□□□□□ -0.37
PMS1-211ENST00000424766 PYY3Q5JQD4 70 aa12.71□□□□□ -0.37
PMS1-211ENST00000424766 SOSTDC1Q6X4U4 206 aa12.71□□□□□ -0.37
PMS1-211ENST00000424766 VAMP8Q9BV40 100 aa12.71□□□□□ -0.37
PMS1-211ENST00000424766 FAT1Q14517 4588 aa12.7□□□□□ -0.38
PMS1-211ENST00000424766 RPL37AP8A6NKH3 93 aa12.7□□□□□ -0.38
PMS1-211ENST00000424766 NDUFC2O95298 119 aa12.7□□□□□ -0.38
PMS1-211ENST00000424766 C1orf137Q5JT78 98 aa12.7□□□□□ -0.38
PMS1-211ENST00000424766 LINC00308Q8TCZ7 52 aa12.7□□□□□ -0.38
PMS1-211ENST00000424766 SPANXDQ9BXN6 97 aa12.7□□□□□ -0.38
PMS1-211ENST00000424766 SPANXCQ9NY87 97 aa12.7□□□□□ -0.38
PMS1-211ENST00000424766 Q6ZVH6 145 aa12.69□□□□□ -0.38
PMS1-211ENST00000424766 IGLV1-50A0A075B6I6 118 aa12.68□□□□□ -0.38
PMS1-211ENST00000424766 EIF4EBP3O60516 100 aaPredicted RBP12.68□□□□□ -0.38
PMS1-211ENST00000424766 COX8AP10176 69 aa12.68□□□□□ -0.38
PMS1-211ENST00000424766 NPC2P61916 151 aa12.68□□□□□ -0.38
PMS1-211ENST00000424766 SPATA45Q537H7 98 aa12.68□□□□□ -0.38
PMS1-211ENST00000424766 PAM16Q9Y3D7 125 aa12.68□□□□□ -0.38
PMS1-211ENST00000424766 TRBV10-2A0A0K0K1G8 114 aa12.67□□□□□ -0.38
PMS1-211ENST00000424766 VPS13BQ7Z7G8 4022 aa12.67□□□□□ -0.38
PMS1-211ENST00000424766 DLEU1O43261 78 aa12.66□□□□□ -0.38
PMS1-211ENST00000424766 IFITM1P13164 125 aa12.66□□□□□ -0.38
PMS1-211ENST00000424766 HNRNPA3P51991 378 aaKnown RBP12.66□□□□□ -0.38
PMS1-211ENST00000424766 COPS9Q8WXC6 57 aa12.66□□□□□ -0.38
PMS1-211ENST00000424766 PPDPFQ9H3Y8 114 aa12.66□□□□□ -0.38
PMS1-211ENST00000424766 NCR3O14931 201 aa12.65□□□□□ -0.38
PMS1-211ENST00000424766 IGLV7-43P04211 117 aa12.65□□□□□ -0.38
PMS1-211ENST00000424766 SRSF9Q13242 221 aaKnown RBP eCLIP12.65□□□□□ -0.38
PMS1-211ENST00000424766 SPANXB1Q9NS25 103 aaPredicted RBP12.65□□□□□ -0.38
PMS1-211ENST00000424766 IGKV2-28A0A075B6P5 120 aa12.64□□□□□ -0.39
PMS1-211ENST00000424766 IGKV2D-28P01615 120 aa12.64□□□□□ -0.39
PMS1-211ENST00000424766 SPINK6Q6UWN8 80 aa12.63□□□□□ -0.39
PMS1-211ENST00000424766 C14orf144Q96I85 54 aa12.62□□□□□ -0.39
PMS1-211ENST00000424766 BCE1O60756 84 aa12.61□□□□□ -0.39
PMS1-211ENST00000424766 REG3GQ6UW15 175 aa12.6□□□□□ -0.39
PMS1-211ENST00000424766 MUSTN1Q8IVN3 82 aa12.6□□□□□ -0.39
PMS1-211ENST00000424766 TRBV10-3A0A0K0K1G6 114 aa12.59□□□□□ -0.39
PMS1-211ENST00000424766 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
PMS1-211ENST00000424766 LINC00518Q8N0U6 118 aa12.59□□□□□ -0.39
PMS1-211ENST00000424766 KCNQ1DNQ9H478 68 aa12.59□□□□□ -0.39
PMS1-211ENST00000424766 DDTP30046 118 aa12.58□□□□□ -0.4
PMS1-211ENST00000424766 TMEM126AQ9H061 195 aa12.58□□□□□ -0.4
PMS1-211ENST00000424766 PRYO14603 147 aa12.57□□□□□ -0.4
PMS1-211ENST00000424766 S100A7L2Q5SY68 101 aa12.57□□□□□ -0.4
PMS1-211ENST00000424766 ZNF861PO60384 105 aa12.56□□□□□ -0.4
PMS1-211ENST00000424766 IGLV6-57P01721 117 aa12.56□□□□□ -0.4
PMS1-211ENST00000424766 S100A12P80511 92 aa12.56□□□□□ -0.4
PMS1-211ENST00000424766 FLG2Q5D862 2391 aaPredicted RBP12.56□□□□□ -0.4
PMS1-211ENST00000424766 DIRC1Q969H9 104 aa12.55□□□□□ -0.4
PMS1-211ENST00000424766 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
PMS1-211ENST00000424766 RPL28P46779 137 aaKnown RBP12.54□□□□□ -0.4
PMS1-211ENST00000424766 CBY1Q9Y3M2 126 aa12.53□□□□□ -0.4
PMS1-211ENST00000424766 SPRR1AP35321 89 aa12.52□□□□□ -0.41
PMS1-211ENST00000424766 UBE2AP49459 152 aa12.52□□□□□ -0.41
PMS1-211ENST00000424766 KRTAP13-1Q8IUC0 172 aa12.52□□□□□ -0.41
PMS1-211ENST00000424766 HIST1H4GQ99525 98 aa12.52□□□□□ -0.41
PMS1-211ENST00000424766 FAM19A1Q7Z5A9 133 aa12.51□□□□□ -0.41
PMS1-211ENST00000424766 OR13C6PQ8NH95 151 aa12.51□□□□□ -0.41
PMS1-211ENST00000424766 H0Y9J4 135 aa12.5□□□□□ -0.41
PMS1-211ENST00000424766 OXTP01178 125 aa12.5□□□□□ -0.41
PMS1-211ENST00000424766 LINC00337Q8N6G1 96 aa12.5□□□□□ -0.41
PMS1-211ENST00000424766 C2orf91Q6ZV80 131 aa12.49□□□□□ -0.41
PMS1-211ENST00000424766 LOC105371267A0A1B0GV96 52 aa12.48□□□□□ -0.41
PMS1-211ENST00000424766 KRTAP29-1A8MX34 341 aaPredicted RBP12.48□□□□□ -0.41
PMS1-211ENST00000424766 KRTAP4-16G5E9R7 235 aaPredicted RBP12.48□□□□□ -0.41
PMS1-211ENST00000424766 ABCA13Q86UQ4 5058 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms