RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
GTF3C2-204ENST00000423998 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
GTF3C2-204ENST00000423998 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
GTF3C2-204ENST00000423998 SPINK6Q6UWN8 80 aa8.59□□□□□ -1.03
GTF3C2-204ENST00000423998 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
GTF3C2-204ENST00000423998 CBY1Q9Y3M2 126 aa8.59□□□□□ -1.03
GTF3C2-204ENST00000423998 SRRM2Q9UQ35 2752 aaKnown RBP8.58□□□□□ -1.04
GTF3C2-204ENST00000423998 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
GTF3C2-204ENST00000423998 C1orf137Q5JT78 98 aa8.58□□□□□ -1.04
GTF3C2-204ENST00000423998 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
GTF3C2-204ENST00000423998 ZNF815PA8K554 130 aa8.57□□□□□ -1.04
GTF3C2-204ENST00000423998 TIMM17BO60830 172 aa8.57□□□□□ -1.04
GTF3C2-204ENST00000423998 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
GTF3C2-204ENST00000423998 REG3GQ6UW15 175 aa8.57□□□□□ -1.04
GTF3C2-204ENST00000423998 SCGB1D4Q6XE38 83 aa8.57□□□□□ -1.04
GTF3C2-204ENST00000423998 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
GTF3C2-204ENST00000423998 M0R378 163 aa8.56□□□□□ -1.04
GTF3C2-204ENST00000423998 SCGB1D1O95968 90 aa8.56□□□□□ -1.04
GTF3C2-204ENST00000423998 OXTP01178 125 aa8.56□□□□□ -1.04
GTF3C2-204ENST00000423998 BOD1L2Q8IYS8 172 aa8.56□□□□□ -1.04
GTF3C2-204ENST00000423998 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
GTF3C2-204ENST00000423998 A0A0J9YXY3 114 aa8.55□□□□□ -1.04
GTF3C2-204ENST00000423998 TSPEAR-AS2P59090 65 aa8.55□□□□□ -1.04
GTF3C2-204ENST00000423998 Q6ZVH6 145 aa8.55□□□□□ -1.04
GTF3C2-204ENST00000423998 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
GTF3C2-204ENST00000423998 DIRC1Q969H9 104 aa8.55□□□□□ -1.04
GTF3C2-204ENST00000423998 LINC00167Q96N53 147 aa8.55□□□□□ -1.04
GTF3C2-204ENST00000423998 TMEM238C9JI98 176 aa8.54□□□□□ -1.04
GTF3C2-204ENST00000423998 VPREB1P12018 145 aa8.54□□□□□ -1.04
GTF3C2-204ENST00000423998 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
GTF3C2-204ENST00000423998 NDUFC2O95298 119 aa8.53□□□□□ -1.04
GTF3C2-204ENST00000423998 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
GTF3C2-204ENST00000423998 RPL28P46779 137 aaKnown RBP8.53□□□□□ -1.04
GTF3C2-204ENST00000423998 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
GTF3C2-204ENST00000423998 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
GTF3C2-204ENST00000423998 TRBV10-2A0A0K0K1G8 114 aa8.52□□□□□ -1.05
GTF3C2-204ENST00000423998 J3QL48 77 aa8.52□□□□□ -1.05
GTF3C2-204ENST00000423998 ATOH7Q8N100 152 aa8.52□□□□□ -1.05
GTF3C2-204ENST00000423998 FAT1Q14517 4588 aa8.51□□□□□ -1.05
GTF3C2-204ENST00000423998 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
GTF3C2-204ENST00000423998 GAGE10A6NGK3 116 aa8.51□□□□□ -1.05
GTF3C2-204ENST00000423998 BCE1O60756 84 aa8.51□□□□□ -1.05
GTF3C2-204ENST00000423998 HNRNPA3P51991 378 aaKnown RBP8.51□□□□□ -1.05
GTF3C2-204ENST00000423998 LINC00518Q8N0U6 118 aa8.51□□□□□ -1.05
GTF3C2-204ENST00000423998 RPL37AP8A6NKH3 93 aa8.5□□□□□ -1.05
GTF3C2-204ENST00000423998 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
GTF3C2-204ENST00000423998 IFITM1P13164 125 aa8.5□□□□□ -1.05
GTF3C2-204ENST00000423998 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.052e-8■□□□□ 8.9
GTF3C2-204ENST00000423998 SPANXB1Q9NS25 103 aaPredicted RBP8.5□□□□□ -1.05
GTF3C2-204ENST00000423998 ZNF861PO60384 105 aa8.49□□□□□ -1.05
GTF3C2-204ENST00000423998 S100A7L2Q5SY68 101 aa8.49□□□□□ -1.05
GTF3C2-204ENST00000423998 PPDPFQ9H3Y8 114 aa8.49□□□□□ -1.05
GTF3C2-204ENST00000423998 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
GTF3C2-204ENST00000423998 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
GTF3C2-204ENST00000423998 UBE2AP49459 152 aa8.48□□□□□ -1.05
GTF3C2-204ENST00000423998 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
GTF3C2-204ENST00000423998 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
GTF3C2-204ENST00000423998 HINT1P49773 126 aaPredicted RBP8.47□□□□□ -1.05
GTF3C2-204ENST00000423998 DAND5Q8N907 189 aa8.47□□□□□ -1.05
GTF3C2-204ENST00000423998 PRYO14603 147 aa8.46□□□□□ -1.06
GTF3C2-204ENST00000423998 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
GTF3C2-204ENST00000423998 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.06
GTF3C2-204ENST00000423998 JOSD1Q15040 202 aaPredicted RBP8.45□□□□□ -1.06
GTF3C2-204ENST00000423998 ADAMTSL4-AS1Q5T5F5 129 aa8.45□□□□□ -1.06
GTF3C2-204ENST00000423998 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
GTF3C2-204ENST00000423998 VPS13BQ7Z7G8 4022 aa8.45□□□□□ -1.06
GTF3C2-204ENST00000423998 H0Y9J4 135 aa8.44□□□□□ -1.06
GTF3C2-204ENST00000423998 DDTP30046 118 aa8.44□□□□□ -1.06
GTF3C2-204ENST00000423998 VAMP8Q9BV40 100 aa8.44□□□□□ -1.06
GTF3C2-204ENST00000423998 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
GTF3C2-204ENST00000423998 NCR3O14931 201 aa8.43□□□□□ -1.06
GTF3C2-204ENST00000423998 FAM19A1Q7Z5A9 133 aa8.43□□□□□ -1.06
GTF3C2-204ENST00000423998 PCP2Q8IVA1 136 aa8.43□□□□□ -1.06
GTF3C2-204ENST00000423998 LITAFQ99732 161 aa8.43□□□□□ -1.06
GTF3C2-204ENST00000423998 ETDCA0A1B0GVM5 59 aa8.42□□□□□ -1.06
GTF3C2-204ENST00000423998 DLEU1O43261 78 aa8.42□□□□□ -1.06
GTF3C2-204ENST00000423998 KRTAP11-1Q8IUC1 163 aa8.42□□□□□ -1.06
GTF3C2-204ENST00000423998 LINC00337Q8N6G1 96 aa8.42□□□□□ -1.06
GTF3C2-204ENST00000423998 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
GTF3C2-204ENST00000423998 TMA7Q9Y2S6 64 aaKnown RBP8.42□□□□□ -1.06
GTF3C2-204ENST00000423998 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
GTF3C2-204ENST00000423998 NPC2P61916 151 aa8.41□□□□□ -1.06
GTF3C2-204ENST00000423998 OR13C6PQ8NH95 151 aa8.41□□□□□ -1.06
GTF3C2-204ENST00000423998 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
GTF3C2-204ENST00000423998 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.06
GTF3C2-204ENST00000423998 COX8AP10176 69 aa8.4□□□□□ -1.06
GTF3C2-204ENST00000423998 RPL13AP40429 203 aaKnown RBP8.4□□□□□ -1.06
GTF3C2-204ENST00000423998 IGLV6-57P01721 117 aa8.39□□□□□ -1.07
GTF3C2-204ENST00000423998 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
GTF3C2-204ENST00000423998 TRAV13-2A0A0B4J235 113 aa8.38□□□□□ -1.07
GTF3C2-204ENST00000423998 SPATA45Q537H7 98 aa8.38□□□□□ -1.07
GTF3C2-204ENST00000423998 Q8NDZ9 215 aa8.38□□□□□ -1.07
GTF3C2-204ENST00000423998 PCLOQ9Y6V0 5065 aa8.38□□□□□ -1.07
GTF3C2-204ENST00000423998 TRAV23DV6A0A075B6W5 121 aa8.37□□□□□ -1.07
GTF3C2-204ENST00000423998 SPRR1AP35321 89 aa8.37□□□□□ -1.07
GTF3C2-204ENST00000423998 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
GTF3C2-204ENST00000423998 SOSTDC1Q6X4U4 206 aa8.37□□□□□ -1.07
GTF3C2-204ENST00000423998 MUSTN1Q8IVN3 82 aa8.37□□□□□ -1.07
GTF3C2-204ENST00000423998 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
GTF3C2-204ENST00000423998 HIST1H4GQ99525 98 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 210.9 ms