RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 MTURNQ8N3F0 131 aa11.07□□□□□ -0.64
SSBP3-205ENST00000417664 CLEC2BQ92478 149 aa11.07□□□□□ -0.64
SSBP3-205ENST00000417664 USP17L23D6RBM5 183 aa11.06□□□□□ -0.64
SSBP3-205ENST00000417664 ETDBQ3ZM63 59 aa11.06□□□□□ -0.64
SSBP3-205ENST00000417664 TRACP01848 142 aa11.05□□□□□ -0.64
SSBP3-205ENST00000417664 TTC32Q5I0X7 151 aa11.04□□□□□ -0.64
SSBP3-205ENST00000417664 CARD19Q96LW7 228 aa11.04□□□□□ -0.64
SSBP3-205ENST00000417664 H3BT86 120 aa11.04□□□□□ -0.64
SSBP3-205ENST00000417664 ANKRD29Q8N6D5 301 aa11.04□□□□□ -0.64
SSBP3-205ENST00000417664 TLX1NBP0CAT3 122 aa11.03□□□□□ -0.64
SSBP3-205ENST00000417664 TEN1Q86WV5 123 aa11.03□□□□□ -0.64
SSBP3-205ENST00000417664 DYNC2H1Q8NCM8 4307 aaKnown RBP11.02□□□□□ -0.64
SSBP3-205ENST00000417664 J3QR89 54 aa11.02□□□□□ -0.64
SSBP3-205ENST00000417664 PRR3P79522 188 aaKnown RBP11.02□□□□□ -0.64
SSBP3-205ENST00000417664 DNHD1Q96M86 4753 aa11.02□□□□□ -0.65
SSBP3-205ENST00000417664 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
SSBP3-205ENST00000417664 Q8NDZ9 215 aa11.01□□□□□ -0.65
SSBP3-205ENST00000417664 KRTAP1-5Q9BYS1 174 aa11.01□□□□□ -0.65
SSBP3-205ENST00000417664 XAGE1AQ9HD64 81 aa11.01□□□□□ -0.65
SSBP3-205ENST00000417664 NCR3O14931 201 aa11□□□□□ -0.65
SSBP3-205ENST00000417664 CASC10Q5T4H9 136 aa11□□□□□ -0.65
SSBP3-205ENST00000417664 IGLV6-57P01721 117 aa10.99□□□□□ -0.65
SSBP3-205ENST00000417664 Q6ZRP5 223 aa10.98□□□□□ -0.65
SSBP3-205ENST00000417664 CBY1Q9Y3M2 126 aa10.98□□□□□ -0.65
SSBP3-205ENST00000417664 PRKDCP78527 4128 aaKnown RBP10.98□□□□□ -0.65
SSBP3-205ENST00000417664 MEGF8Q7Z7M0 2845 aa10.98□□□□□ -0.65
SSBP3-205ENST00000417664 A0A1B0GX51 115 aa10.98□□□□□ -0.65
SSBP3-205ENST00000417664 NBDYA0A0U1RRE5 68 aa10.97□□□□□ -0.65
SSBP3-205ENST00000417664 PSCAO43653 123 aa10.97□□□□□ -0.65
SSBP3-205ENST00000417664 SLPIP03973 132 aa10.97□□□□□ -0.65
SSBP3-205ENST00000417664 VPREB1P12018 145 aa10.97□□□□□ -0.65
SSBP3-205ENST00000417664 RPL18AQ02543 176 aaKnown RBP10.97□□□□□ -0.65
SSBP3-205ENST00000417664 C14orf177Q52M58 125 aa10.97□□□□□ -0.65
SSBP3-205ENST00000417664 PPDPFLQ8WWR9 84 aa10.97□□□□□ -0.65
SSBP3-205ENST00000417664 FAM218AQ96MZ4 157 aa10.97□□□□□ -0.65
SSBP3-205ENST00000417664 DNAH1Q9P2D7 4330 aa10.96□□□□□ -0.65
SSBP3-205ENST00000417664 GAGE2EQ4V326 116 aa10.96□□□□□ -0.65
SSBP3-205ENST00000417664 GAGE2DQ9UEU5 116 aa10.96□□□□□ -0.65
SSBP3-205ENST00000417664 M0R378 163 aa10.95□□□□□ -0.66
SSBP3-205ENST00000417664 DNAL4O96015 105 aa10.95□□□□□ -0.66
SSBP3-205ENST00000417664 SNCGO76070 127 aa10.94□□□□□ -0.66
SSBP3-205ENST00000417664 PLA2G2DQ9UNK4 145 aa10.94□□□□□ -0.66
SSBP3-205ENST00000417664 LECT2O14960 151 aa10.92□□□□□ -0.66
SSBP3-205ENST00000417664 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
SSBP3-205ENST00000417664 TRBV10-3A0A0K0K1G6 114 aa10.92□□□□□ -0.66
SSBP3-205ENST00000417664 LOC107984640A0A0U1RRK4 108 aa10.92□□□□□ -0.66
SSBP3-205ENST00000417664 C6orf99Q4VX62 202 aa10.92□□□□□ -0.66
SSBP3-205ENST00000417664 C9orf129Q5T035 196 aaKnown RBP10.92□□□□□ -0.66
SSBP3-205ENST00000417664 CSMD3Q7Z407 3707 aa10.91□□□□□ -0.66
SSBP3-205ENST00000417664 A0A087WYN8 130 aa10.91□□□□□ -0.66
SSBP3-205ENST00000417664 TRAV23DV6A0A075B6W5 121 aa10.9□□□□□ -0.66
SSBP3-205ENST00000417664 BAALC-AS2P0C853 105 aa10.9□□□□□ -0.66
SSBP3-205ENST00000417664 DNAH7Q8WXX0 4024 aa10.89□□□□□ -0.67
SSBP3-205ENST00000417664 TRBV7-6A0A0J9YX20 115 aa10.89□□□□□ -0.67
SSBP3-205ENST00000417664 IGLV5-37A0A075B6J1 123 aa10.88□□□□□ -0.67
SSBP3-205ENST00000417664 NKAPP1Q8N9T2 125 aa10.88□□□□□ -0.67
SSBP3-205ENST00000417664 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
SSBP3-205ENST00000417664 LINC00167Q96N53 147 aa10.88□□□□□ -0.67
SSBP3-205ENST00000417664 Q8N814 137 aa10.87□□□□□ -0.67
SSBP3-205ENST00000417664 ZNF73O43830 326 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-205ENST00000417664 VPS25Q9BRG1 176 aa10.86□□□□□ -0.67
SSBP3-205ENST00000417664 PKIGQ9Y2B9 76 aa10.86□□□□□ -0.67
SSBP3-205ENST00000417664 LINC00575Q6W349 94 aa10.85□□□□□ -0.67
SSBP3-205ENST00000417664 Q6ZRN7 208 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-205ENST00000417664 TEX49A0A1B0GTD5 131 aa10.85□□□□□ -0.67
SSBP3-205ENST00000417664 ORMDL1Q9P0S3 153 aa10.85□□□□□ -0.67
SSBP3-205ENST00000417664 PLECQ15149 4684 aaKnown RBP10.84□□□□□ -0.67
SSBP3-205ENST00000417664 LYSTQ99698 3801 aa10.84□□□□□ -0.67
SSBP3-205ENST00000417664 LRCOL1A6NCL2 159 aa10.84□□□□□ -0.67
SSBP3-205ENST00000417664 GAGE2BQ13066 116 aa10.84□□□□□ -0.67
SSBP3-205ENST00000417664 C16orf90A8MZG2 172 aa10.82□□□□□ -0.68
SSBP3-205ENST00000417664 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
SSBP3-205ENST00000417664 WWC2-AS2Q96NR7 200 aa10.82□□□□□ -0.68
SSBP3-205ENST00000417664 TENM2Q9NT68 2774 aa10.82□□□□□ -0.68
SSBP3-205ENST00000417664 hADV29S1A0JD25 119 aa10.82□□□□□ -0.68
SSBP3-205ENST00000417664 H3BQ85 93 aa10.82□□□□□ -0.68
SSBP3-205ENST00000417664 KCNQ1DNQ9H478 68 aa10.82□□□□□ -0.68
SSBP3-205ENST00000417664 COX7BP24311 80 aa10.81□□□□□ -0.68
SSBP3-205ENST00000417664 ELOF1P60002 83 aaKnown RBP10.81□□□□□ -0.68
SSBP3-205ENST00000417664 TMEM256-PLSCR3K7ERE1 68 aa10.8□□□□□ -0.68
SSBP3-205ENST00000417664 Q6ZR54 194 aa10.8□□□□□ -0.68
SSBP3-205ENST00000417664 C7orf33Q8WU49 177 aa10.8□□□□□ -0.68
SSBP3-205ENST00000417664 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
SSBP3-205ENST00000417664 STARD9Q9P2P6 4700 aa10.8□□□□□ -0.68
SSBP3-205ENST00000417664 FBN3Q75N90 2809 aa10.79□□□□□ -0.68
SSBP3-205ENST00000417664 INAFM2P0DMQ5 153 aa10.79□□□□□ -0.68
SSBP3-205ENST00000417664 GHRHP01286 108 aa10.79□□□□□ -0.68
SSBP3-205ENST00000417664 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
SSBP3-205ENST00000417664 VPS13DQ5THJ4 4388 aa10.77□□□□□ -0.69
SSBP3-205ENST00000417664 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.76□□□□□ -0.69
SSBP3-205ENST00000417664 M0R2N4 97 aa10.76□□□□□ -0.69
SSBP3-205ENST00000417664 PRYO14603 147 aa10.76□□□□□ -0.69
SSBP3-205ENST00000417664 MRPL55Q7Z7F7 128 aaKnown RBP10.76□□□□□ -0.69
SSBP3-205ENST00000417664 IGLV1-50A0A075B6I6 118 aa10.76□□□□□ -0.69
SSBP3-205ENST00000417664 FAM240AA0A1B0GVK7 77 aa10.76□□□□□ -0.69
SSBP3-205ENST00000417664 FAM168BA1KXE4 195 aa10.76□□□□□ -0.69
SSBP3-205ENST00000417664 OBSCN-AS1Q96MR7 158 aa10.76□□□□□ -0.69
SSBP3-205ENST00000417664 A0A096LNI7 61 aa10.75□□□□□ -0.69
SSBP3-205ENST00000417664 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-205ENST00000417664 LINC00528Q8N1L1 170 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms