RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TMEM223A0PJW6 202 aa10.32□□□□□ -0.76
PDLIM2-208ENST00000416159 LINC00158P58513 81 aa10.32□□□□□ -0.76
PDLIM2-208ENST00000416159 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
PDLIM2-208ENST00000416159 YPEL4Q96NS1 127 aa10.32□□□□□ -0.76
PDLIM2-208ENST00000416159 TMEM238C9JI98 176 aa10.31□□□□□ -0.76
PDLIM2-208ENST00000416159 PRLHP81277 87 aa10.31□□□□□ -0.76
PDLIM2-208ENST00000416159 KRTAP13-2Q52LG2 175 aa10.31□□□□□ -0.76
PDLIM2-208ENST00000416159 M0R378 163 aa10.3□□□□□ -0.76
PDLIM2-208ENST00000416159 Q8NDZ9 215 aa10.3□□□□□ -0.76
PDLIM2-208ENST00000416159 IGKV2D-26A0A0A0MRZ7 120 aa10.28□□□□□ -0.76
PDLIM2-208ENST00000416159 A0A0U1RRA0 63 aa10.27□□□□□ -0.77
PDLIM2-208ENST00000416159 ATP6V1G1O75348 118 aa10.27□□□□□ -0.77
PDLIM2-208ENST00000416159 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
PDLIM2-208ENST00000416159 HSBP1O75506 76 aa10.26□□□□□ -0.77
PDLIM2-208ENST00000416159 LINC00304Q8N9R0 145 aa10.26□□□□□ -0.77
PDLIM2-208ENST00000416159 HERV-K104P63124 156 aa10.25□□□□□ -0.77
PDLIM2-208ENST00000416159 MEIG1Q5JSS6 88 aa10.25□□□□□ -0.77
PDLIM2-208ENST00000416159 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
PDLIM2-208ENST00000416159 LINC00587B1AMM8 73 aa10.24□□□□□ -0.77
PDLIM2-208ENST00000416159 SMIM13P0DJ93 91 aa10.24□□□□□ -0.77
PDLIM2-208ENST00000416159 CTAG1AP78358 180 aa10.24□□□□□ -0.77
PDLIM2-208ENST00000416159 FAM19A2Q8N3H0 131 aa10.24□□□□□ -0.77
PDLIM2-208ENST00000416159 HIGD2AQ9BW72 106 aa10.23□□□□□ -0.77
PDLIM2-208ENST00000416159 BOD1L2Q8IYS8 172 aa10.22□□□□□ -0.77
PDLIM2-208ENST00000416159 MIR7-3HGQ8N6C7 128 aa10.21□□□□□ -0.77
PDLIM2-208ENST00000416159 NDUFA12Q9UI09 145 aa10.21□□□□□ -0.77
PDLIM2-208ENST00000416159 MYMXA0A1B0GTQ4 84 aa10.2□□□□□ -0.78
PDLIM2-208ENST00000416159 PRYO14603 147 aa10.2□□□□□ -0.78
PDLIM2-208ENST00000416159 MAP1LC3CQ9BXW4 147 aa10.2□□□□□ -0.78
PDLIM2-208ENST00000416159 LEPROTL1O95214 131 aa10.19□□□□□ -0.78
PDLIM2-208ENST00000416159 TRGC2P03986 189 aa10.19□□□□□ -0.78
PDLIM2-208ENST00000416159 H0Y8G0 127 aa10.18□□□□□ -0.78
PDLIM2-208ENST00000416159 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
PDLIM2-208ENST00000416159 KCNQ1DNQ9H478 68 aa10.18□□□□□ -0.78
PDLIM2-208ENST00000416159 ZNF706Q9Y5V0 76 aaPredicted RBP10.18□□□□□ -0.78
PDLIM2-208ENST00000416159 NCR3O14931 201 aa10.17□□□□□ -0.78
PDLIM2-208ENST00000416159 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
PDLIM2-208ENST00000416159 LINC00337Q8N6G1 96 aa10.17□□□□□ -0.78
PDLIM2-208ENST00000416159 RETNLBQ9BQ08 111 aa10.17□□□□□ -0.78
PDLIM2-208ENST00000416159 LEPROTO15243 131 aa10.16□□□□□ -0.78
PDLIM2-208ENST00000416159 SERF1AO75920 110 aa10.16□□□□□ -0.78
PDLIM2-208ENST00000416159 SPRR1AP35321 89 aa10.16□□□□□ -0.78
PDLIM2-208ENST00000416159 SPAG11AQ6PDA7 123 aa10.15□□□□□ -0.78
PDLIM2-208ENST00000416159 ETDCA0A1B0GVM5 59 aa10.14□□□□□ -0.79
PDLIM2-208ENST00000416159 PLNP26678 52 aa10.14□□□□□ -0.79
PDLIM2-208ENST00000416159 S100A12P80511 92 aa10.14□□□□□ -0.79
PDLIM2-208ENST00000416159 HSPB8Q9UJY1 196 aa10.14□□□□□ -0.79
PDLIM2-208ENST00000416159 LOC107984156A0A0G2JMH3 177 aa10.13□□□□□ -0.79
PDLIM2-208ENST00000416159 TRBV10-3A0A0K0K1G6 114 aa10.13□□□□□ -0.79
PDLIM2-208ENST00000416159 A0A0U1RQV1 116 aa10.13□□□□□ -0.79
PDLIM2-208ENST00000416159 LINC00310P59036 64 aa10.13□□□□□ -0.79
PDLIM2-208ENST00000416159 ARL17AQ8IVW1 177 aa10.13□□□□□ -0.79
PDLIM2-208ENST00000416159 SMCR5Q8TEV8 140 aa10.13□□□□□ -0.79
PDLIM2-208ENST00000416159 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
PDLIM2-208ENST00000416159 KRTAP4-16G5E9R7 235 aaPredicted RBP10.12□□□□□ -0.79
PDLIM2-208ENST00000416159 TSPEAR-AS2P59090 65 aa10.12□□□□□ -0.79
PDLIM2-208ENST00000416159 HERVK_113P61574 105 aa10.12□□□□□ -0.79
PDLIM2-208ENST00000416159 J3QQQ9 107 aa10.11□□□□□ -0.79
PDLIM2-208ENST00000416159 DPM2O94777 84 aa10.11□□□□□ -0.79
PDLIM2-208ENST00000416159 TPRXLQ17RH7 258 aa10.11□□□□□ -0.79
PDLIM2-208ENST00000416159 C4orf48Q5BLP8 95 aa10.11□□□□□ -0.79
PDLIM2-208ENST00000416159 FABP4P15090 132 aa10.1□□□□□ -0.79
PDLIM2-208ENST00000416159 NMUP48645 174 aa10.1□□□□□ -0.79
PDLIM2-208ENST00000416159 TRBV10-2A0A0K0K1G8 114 aa10.09□□□□□ -0.79
PDLIM2-208ENST00000416159 DAND5Q8N907 189 aa10.09□□□□□ -0.79
PDLIM2-208ENST00000416159 CDIP1Q9H305 208 aa10.09□□□□□ -0.79
PDLIM2-208ENST00000416159 IGKCP01834 107 aa10.08□□□□□ -0.8
PDLIM2-208ENST00000416159 LGALS3P17931 250 aaKnown RBP10.08□□□□□ -0.8
PDLIM2-208ENST00000416159 DDTP30046 118 aa10.08□□□□□ -0.8
PDLIM2-208ENST00000416159 B5MCH6 92 aa10.07□□□□□ -0.8
PDLIM2-208ENST00000416159 PMCHL2Q9BQD1 86 aa10.07□□□□□ -0.8
PDLIM2-208ENST00000416159 MIEN1Q9BRT3 115 aa10.07□□□□□ -0.8
PDLIM2-208ENST00000416159 PPDPFQ9H3Y8 114 aa10.07□□□□□ -0.8
PDLIM2-208ENST00000416159 COLCA2A8K830 154 aa10.06□□□□□ -0.8
PDLIM2-208ENST00000416159 Q8NBF4 154 aa10.06□□□□□ -0.8
PDLIM2-208ENST00000416159 SPANXB1Q9NS25 103 aaPredicted RBP10.06□□□□□ -0.8
PDLIM2-208ENST00000416159 LINC00483Q53H64 154 aa10.05□□□□□ -0.8
PDLIM2-208ENST00000416159 NDUFC2O95298 119 aa10.04□□□□□ -0.8
PDLIM2-208ENST00000416159 GAGE2AQ6NT46 116 aa10.04□□□□□ -0.8
PDLIM2-208ENST00000416159 FP248Q71RG6 208 aaPredicted RBP10.04□□□□□ -0.8
PDLIM2-208ENST00000416159 SLC7A5P1Q8MH63 180 aa10.04□□□□□ -0.8
PDLIM2-208ENST00000416159 MUC2Q02817 5179 aa10.02□□□□□ -0.8
PDLIM2-208ENST00000416159 SPINK1P00995 79 aa10.02□□□□□ -0.81
PDLIM2-208ENST00000416159 S100A7L2Q5SY68 101 aa10.02□□□□□ -0.81
PDLIM2-208ENST00000416159 ERC2-IT1O76042 136 aa10.01□□□□□ -0.81
PDLIM2-208ENST00000416159 IGLV6-57P01721 117 aa10.01□□□□□ -0.81
PDLIM2-208ENST00000416159 E9PLD3 99 aa10□□□□□ -0.81
PDLIM2-208ENST00000416159 Q6ZRX8 168 aa10□□□□□ -0.81
PDLIM2-208ENST00000416159 SSBP3-AS1Q7Z2R9 100 aa10□□□□□ -0.81
PDLIM2-208ENST00000416159 Q9BRP9 147 aa10□□□□□ -0.81
PDLIM2-208ENST00000416159 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
PDLIM2-208ENST00000416159 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
PDLIM2-208ENST00000416159 SOSTDC1Q6X4U4 206 aa9.98□□□□□ -0.81
PDLIM2-208ENST00000416159 TRAV23DV6A0A075B6W5 121 aa9.97□□□□□ -0.81
PDLIM2-208ENST00000416159 IGLV9-49A0A0B4J1Y8 123 aa9.97□□□□□ -0.81
PDLIM2-208ENST00000416159 NPC2P61916 151 aa9.97□□□□□ -0.81
PDLIM2-208ENST00000416159 ADAMTSL4-AS1Q5T5F5 129 aa9.97□□□□□ -0.81
PDLIM2-208ENST00000416159 CBY1Q9Y3M2 126 aa9.97□□□□□ -0.81
PDLIM2-208ENST00000416159 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
PDLIM2-208ENST00000416159 MOBPQ13875 183 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms