RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 KLK5Q9Y337 293 aaPredicted RBP10.05□□□□□ -0.8
USP4-203ENST00000415188 NUPR2A6NF83 97 aa10.04□□□□□ -0.8
USP4-203ENST00000415188 BAALC-AS2P0C853 105 aa10.04□□□□□ -0.8
USP4-203ENST00000415188 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
USP4-203ENST00000415188 PRR34Q9NV39 138 aa10.04□□□□□ -0.8
USP4-203ENST00000415188 A0A1B0GV72 72 aa10.04□□□□□ -0.8
USP4-203ENST00000415188 SNCGO76070 127 aa10.04□□□□□ -0.8
USP4-203ENST00000415188 LY6G6CO95867 125 aa10.04□□□□□ -0.8
USP4-203ENST00000415188 FAM218AQ96MZ4 157 aa10.04□□□□□ -0.8
USP4-203ENST00000415188 INAFM2P0DMQ5 153 aa10.03□□□□□ -0.8
USP4-203ENST00000415188 HTN3P15516 51 aa10.03□□□□□ -0.8
USP4-203ENST00000415188 Q6Q795 121 aa10.03□□□□□ -0.8
USP4-203ENST00000415188 KMT2AQ03164 3969 aa10.02□□□□□ -0.81
USP4-203ENST00000415188 DNAL4O96015 105 aa10.02□□□□□ -0.81
USP4-203ENST00000415188 A0A1B0GX51 115 aa10.01□□□□□ -0.81
USP4-203ENST00000415188 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
USP4-203ENST00000415188 OR13C6PQ8NH95 151 aa10□□□□□ -0.81
USP4-203ENST00000415188 IGLV10-54A0A075B6I4 117 aa9.99□□□□□ -0.81
USP4-203ENST00000415188 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
USP4-203ENST00000415188 LYPD5Q6UWN5 251 aa9.99□□□□□ -0.81
USP4-203ENST00000415188 VPS13DQ5THJ4 4388 aa9.99□□□□□ -0.81
USP4-203ENST00000415188 DNAH10Q8IVF4 4471 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 Q8N3U1 123 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 C15orf53Q8NAA6 179 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 C11orf45Q8TAV5 145 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
USP4-203ENST00000415188 GAGE2BQ13066 116 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 GAGE2EQ4V326 116 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 TMEM126AQ9H061 195 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 GAGE2DQ9UEU5 116 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
USP4-203ENST00000415188 FRAS1Q86XX4 4008 aa9.97□□□□□ -0.81
USP4-203ENST00000415188 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
USP4-203ENST00000415188 A0A087WYN8 130 aa9.96□□□□□ -0.82
USP4-203ENST00000415188 ENHOQ6UWT2 76 aa9.95□□□□□ -0.82
USP4-203ENST00000415188 LINC00167Q96N53 147 aa9.95□□□□□ -0.82
USP4-203ENST00000415188 Q9HAA7 133 aa9.95□□□□□ -0.82
USP4-203ENST00000415188 LECT2O14960 151 aa9.93□□□□□ -0.82
USP4-203ENST00000415188 OBSCN-AS1Q96MR7 158 aa9.93□□□□□ -0.82
USP4-203ENST00000415188 ORMDL1Q9P0S3 153 aa9.92□□□□□ -0.82
USP4-203ENST00000415188 DNAH6Q9C0G6 4158 aa9.92□□□□□ -0.82
USP4-203ENST00000415188 TRBV7-7A0A0K0K1E9 115 aa9.91□□□□□ -0.82
USP4-203ENST00000415188 UNQ6190/PRO20217Q6UXQ8 127 aa9.91□□□□□ -0.82
USP4-203ENST00000415188 SDIM1Q6ZPB5 146 aa9.91□□□□□ -0.82
USP4-203ENST00000415188 LINC00643Q86TS7 51 aa9.91□□□□□ -0.82
USP4-203ENST00000415188 IMUPQ9GZP8 106 aa9.91□□□□□ -0.82
USP4-203ENST00000415188 F8WDY8 70 aa9.9□□□□□ -0.83
USP4-203ENST00000415188 C9orf116Q5BN46 136 aaPredicted RBP9.9□□□□□ -0.83
USP4-203ENST00000415188 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
USP4-203ENST00000415188 C10orf25Q5T742 122 aa9.89□□□□□ -0.83
USP4-203ENST00000415188 Q6ZTC4 211 aa9.89□□□□□ -0.83
USP4-203ENST00000415188 APLNQ9ULZ1 77 aa9.89□□□□□ -0.83
USP4-203ENST00000415188 S100A7L2Q5SY68 101 aa9.88□□□□□ -0.83
USP4-203ENST00000415188 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
USP4-203ENST00000415188 Q8N814 137 aa9.87□□□□□ -0.83
USP4-203ENST00000415188 ANAPC13Q9BS18 74 aa9.87□□□□□ -0.83
USP4-203ENST00000415188 NCR3O14931 201 aa9.86□□□□□ -0.83
USP4-203ENST00000415188 NDUFV3P56181 108 aaKnown RBP9.86□□□□□ -0.83
USP4-203ENST00000415188 PRR3P79522 188 aaKnown RBP9.86□□□□□ -0.83
USP4-203ENST00000415188 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
USP4-203ENST00000415188 WFDC10BQ8IUB3 73 aa9.86□□□□□ -0.83
USP4-203ENST00000415188 C2orf48Q96LS8 159 aa9.86□□□□□ -0.83
USP4-203ENST00000415188 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 H3BQ85 93 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 TMEM256-PLSCR3K7ERE1 68 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 IGLV6-57P01721 117 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 GAGE2AQ6NT46 116 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 C6orf48Q9UBA6 75 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 JMJD7-PLA2G4BH0Y9G9 81 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 ZNF561-AS1K7EIQ3 104 aa9.85□□□□□ -0.83
USP4-203ENST00000415188 ESRGQ1W209 222 aa9.84□□□□□ -0.83
USP4-203ENST00000415188 Q8NDZ9 215 aa9.84□□□□□ -0.83
USP4-203ENST00000415188 C6orf99Q4VX62 202 aa9.83□□□□□ -0.84
USP4-203ENST00000415188 LINC00575Q6W349 94 aa9.83□□□□□ -0.84
USP4-203ENST00000415188 SMCR5Q8TEV8 140 aa9.82□□□□□ -0.84
USP4-203ENST00000415188 LINC00526Q96FQ7 95 aa9.82□□□□□ -0.84
USP4-203ENST00000415188 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
USP4-203ENST00000415188 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
USP4-203ENST00000415188 C14orf132Q9NPU4 83 aa9.82□□□□□ -0.84
USP4-203ENST00000415188 HECTD4Q9Y4D8 3996 aa9.82□□□□□ -0.84
USP4-203ENST00000415188 DNAH2Q9P225 4427 aa9.82□□□□□ -0.84
USP4-203ENST00000415188 SLPIP03973 132 aa9.81□□□□□ -0.84
USP4-203ENST00000415188 HERC2O95714 4834 aa9.8□□□□□ -0.84
USP4-203ENST00000415188 RPL18AQ02543 176 aaKnown RBP9.79□□□□□ -0.84
USP4-203ENST00000415188 C15orf56Q8N910 161 aa9.79□□□□□ -0.84
USP4-203ENST00000415188 FAT2Q9NYQ8 4349 aa9.79□□□□□ -0.84
USP4-203ENST00000415188 TRBV7-6A0A0J9YX20 115 aa9.79□□□□□ -0.84
USP4-203ENST00000415188 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
USP4-203ENST00000415188 CCKP06307 115 aa9.79□□□□□ -0.84
USP4-203ENST00000415188 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
USP4-203ENST00000415188 DNAH17Q9UFH2 4485 aa9.78□□□□□ -0.84
USP4-203ENST00000415188 TRAV23DV6A0A075B6W5 121 aa9.78□□□□□ -0.84
USP4-203ENST00000415188 C9orf129Q5T035 196 aaKnown RBP9.78□□□□□ -0.84
USP4-203ENST00000415188 DIRC1Q969H9 104 aa9.78□□□□□ -0.84
USP4-203ENST00000415188 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
USP4-203ENST00000415188 GHRHP01286 108 aa9.77□□□□□ -0.85
USP4-203ENST00000415188 HIGD2BQ4VC39 106 aa9.77□□□□□ -0.85
USP4-203ENST00000415188 Q6JHZ5 121 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms