RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 LINC00158P58513 81 aa11.02□□□□□ -0.65
UBXN4-202ENST00000415164 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.65
UBXN4-202ENST00000415164 SPRR4Q96PI1 79 aa11.02□□□□□ -0.65
UBXN4-202ENST00000415164 DAND5Q8N907 189 aa11.01□□□□□ -0.65
UBXN4-202ENST00000415164 ZNF706Q9Y5V0 76 aaPredicted RBP11□□□□□ -0.65
UBXN4-202ENST00000415164 Q8NBF4 154 aa10.99□□□□□ -0.65
UBXN4-202ENST00000415164 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
UBXN4-202ENST00000415164 FP248Q71RG6 208 aaPredicted RBP10.98□□□□□ -0.65
UBXN4-202ENST00000415164 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
UBXN4-202ENST00000415164 BAGE3Q86Y29 109 aa10.97□□□□□ -0.65
UBXN4-202ENST00000415164 A0A096LNJ9 63 aa10.96□□□□□ -0.65
UBXN4-202ENST00000415164 TMEM218A2RU14 115 aa10.96□□□□□ -0.65
UBXN4-202ENST00000415164 ATP6V1G1O75348 118 aa10.96□□□□□ -0.65
UBXN4-202ENST00000415164 COX19Q49B96 90 aa10.96□□□□□ -0.65
UBXN4-202ENST00000415164 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
UBXN4-202ENST00000415164 NCR3O14931 201 aa10.95□□□□□ -0.66
UBXN4-202ENST00000415164 HBDP02042 147 aa10.95□□□□□ -0.66
UBXN4-202ENST00000415164 CLLU1Q5K131 121 aa10.95□□□□□ -0.66
UBXN4-202ENST00000415164 LINC01547P58512 204 aaPredicted RBP10.94□□□□□ -0.66
UBXN4-202ENST00000415164 KRTAP13-3Q3SY46 172 aa10.93□□□□□ -0.66
UBXN4-202ENST00000415164 SEC11CQ9BY50 192 aa10.93□□□□□ -0.66
UBXN4-202ENST00000415164 ETDCA0A1B0GVM5 59 aa10.92□□□□□ -0.66
UBXN4-202ENST00000415164 PRYO14603 147 aa10.92□□□□□ -0.66
UBXN4-202ENST00000415164 LINC00614P0C842 121 aa10.92□□□□□ -0.66
UBXN4-202ENST00000415164 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
UBXN4-202ENST00000415164 UQCC3Q6UW78 93 aa10.92□□□□□ -0.66
UBXN4-202ENST00000415164 BOD1L2Q8IYS8 172 aa10.92□□□□□ -0.66
UBXN4-202ENST00000415164 SMCR5Q8TEV8 140 aa10.92□□□□□ -0.66
UBXN4-202ENST00000415164 SMIM13P0DJ93 91 aa10.91□□□□□ -0.66
UBXN4-202ENST00000415164 URB1-AS1Q96HZ7 61 aa10.91□□□□□ -0.66
UBXN4-202ENST00000415164 CHTOPQ9Y3Y2 248 aaKnown RBP10.91□□□□□ -0.66
UBXN4-202ENST00000415164 ASB16-AS1Q495Z4 193 aa10.9□□□□□ -0.66
UBXN4-202ENST00000415164 C18orf32Q8TCD1 76 aa10.9□□□□□ -0.66
UBXN4-202ENST00000415164 GAGE2AQ6NT46 116 aa10.89□□□□□ -0.67
UBXN4-202ENST00000415164 RPS10P5Q9NQ39 176 aa10.89□□□□□ -0.67
UBXN4-202ENST00000415164 TRAPPC1Q9Y5R8 145 aa10.89□□□□□ -0.67
UBXN4-202ENST00000415164 IGLV9-49A0A0B4J1Y8 123 aa10.88□□□□□ -0.67
UBXN4-202ENST00000415164 SPINK1P00995 79 aa10.88□□□□□ -0.67
UBXN4-202ENST00000415164 NDUFA12Q9UI09 145 aa10.88□□□□□ -0.67
UBXN4-202ENST00000415164 SEC61BP60468 96 aaKnown RBP10.87□□□□□ -0.67
UBXN4-202ENST00000415164 MOBPQ13875 183 aa10.86□□□□□ -0.67
UBXN4-202ENST00000415164 MIR7-3HGQ8N6C7 128 aa10.86□□□□□ -0.67
UBXN4-202ENST00000415164 TMEM223A0PJW6 202 aa10.85□□□□□ -0.67
UBXN4-202ENST00000415164 KRTAP4-1Q9BYQ7 146 aa10.85□□□□□ -0.67
UBXN4-202ENST00000415164 TRBV10-3A0A0K0K1G6 114 aa10.84□□□□□ -0.67
UBXN4-202ENST00000415164 S100A12P80511 92 aa10.84□□□□□ -0.67
UBXN4-202ENST00000415164 KCNQ1DNQ9H478 68 aa10.84□□□□□ -0.67
UBXN4-202ENST00000415164 SPRR1AP35321 89 aa10.82□□□□□ -0.68
UBXN4-202ENST00000415164 RHEBQ15382 184 aa10.81□□□□□ -0.68
UBXN4-202ENST00000415164 COMMD7Q86VX2 200 aa10.81□□□□□ -0.68
UBXN4-202ENST00000415164 LINC00483Q53H64 154 aa10.8□□□□□ -0.68
UBXN4-202ENST00000415164 FAM19A2Q8N3H0 131 aa10.8□□□□□ -0.68
UBXN4-202ENST00000415164 KRTAP4-16G5E9R7 235 aaPredicted RBP10.79□□□□□ -0.68
UBXN4-202ENST00000415164 ERC2-IT1O76042 136 aa10.79□□□□□ -0.68
UBXN4-202ENST00000415164 HERV-K104P63124 156 aa10.79□□□□□ -0.68
UBXN4-202ENST00000415164 Q8N377 158 aa10.78□□□□□ -0.68
UBXN4-202ENST00000415164 IFI27L1Q96BM0 104 aa10.78□□□□□ -0.68
UBXN4-202ENST00000415164 MAP1LC3CQ9BXW4 147 aa10.78□□□□□ -0.68
UBXN4-202ENST00000415164 B5MCH6 92 aa10.77□□□□□ -0.69
UBXN4-202ENST00000415164 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
UBXN4-202ENST00000415164 LINC00587B1AMM8 73 aa10.76□□□□□ -0.69
UBXN4-202ENST00000415164 H0Y8G0 127 aa10.76□□□□□ -0.69
UBXN4-202ENST00000415164 SLC25A20O43772 301 aa10.76□□□□□ -0.69
UBXN4-202ENST00000415164 DDTP30046 118 aa10.76□□□□□ -0.69
UBXN4-202ENST00000415164 C9orf153Q5TBE3 101 aa10.76□□□□□ -0.69
UBXN4-202ENST00000415164 SSBP3-AS1Q7Z2R9 100 aa10.76□□□□□ -0.69
UBXN4-202ENST00000415164 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
UBXN4-202ENST00000415164 IFITM2Q01629 132 aa10.74□□□□□ -0.69
UBXN4-202ENST00000415164 LCE2DQ5TA82 110 aaPredicted RBP10.74□□□□□ -0.69
UBXN4-202ENST00000415164 FSIP2Q5CZC0 6907 aa10.73□□□□□ -0.69
UBXN4-202ENST00000415164 RPS29P62273 56 aaKnown RBP10.73□□□□□ -0.69
UBXN4-202ENST00000415164 Q9BRP9 147 aa10.72□□□□□ -0.69
UBXN4-202ENST00000415164 S100A7L2Q5SY68 101 aa10.71□□□□□ -0.69
UBXN4-202ENST00000415164 C10orf91Q5T1B1 145 aa10.71□□□□□ -0.69
UBXN4-202ENST00000415164 XP32Q5T750 250 aa10.71□□□□□ -0.69
UBXN4-202ENST00000415164 CHCHD1Q96BP2 118 aaKnown RBP10.71□□□□□ -0.69
UBXN4-202ENST00000415164 Q6ZRX8 168 aa10.7□□□□□ -0.7
UBXN4-202ENST00000415164 MIEN1Q9BRT3 115 aa10.7□□□□□ -0.7
UBXN4-202ENST00000415164 TSPEAR-AS2P59090 65 aa10.68□□□□□ -0.7
UBXN4-202ENST00000415164 CRCT1Q9UGL9 99 aa10.68□□□□□ -0.7
UBXN4-202ENST00000415164 TRBV10-2A0A0K0K1G8 114 aa10.67□□□□□ -0.7
UBXN4-202ENST00000415164 APOC3P02656 99 aa10.67□□□□□ -0.7
UBXN4-202ENST00000415164 SPANXB1Q9NS25 103 aaPredicted RBP10.67□□□□□ -0.7
UBXN4-202ENST00000415164 HSBP1O75506 76 aa10.66□□□□□ -0.7
UBXN4-202ENST00000415164 TRAV23DV6A0A075B6W5 121 aa10.65□□□□□ -0.7
UBXN4-202ENST00000415164 LEPROTO15243 131 aa10.65□□□□□ -0.7
UBXN4-202ENST00000415164 NPC2P61916 151 aa10.65□□□□□ -0.7
UBXN4-202ENST00000415164 JOSD1Q15040 202 aaPredicted RBP10.65□□□□□ -0.7
UBXN4-202ENST00000415164 HRCT1Q6UXD1 115 aa10.64□□□□□ -0.71
UBXN4-202ENST00000415164 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
UBXN4-202ENST00000415164 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
UBXN4-202ENST00000415164 C9orf92A6NGG3 77 aa10.61□□□□□ -0.71
UBXN4-202ENST00000415164 J3QQQ9 107 aa10.61□□□□□ -0.71
UBXN4-202ENST00000415164 SNAPINO95295 136 aa10.61□□□□□ -0.71
UBXN4-202ENST00000415164 LGALS3P17931 250 aaKnown RBP10.61□□□□□ -0.71
UBXN4-202ENST00000415164 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
UBXN4-202ENST00000415164 IGLV8-61A0A075B6I0 122 aa10.6□□□□□ -0.71
UBXN4-202ENST00000415164 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
UBXN4-202ENST00000415164 IGLV6-57P01721 117 aa10.6□□□□□ -0.71
UBXN4-202ENST00000415164 HERVK_113P61574 105 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms