RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
LINC00963-201ENST00000412141 RPL24P83731 157 aaKnown RBP6.85□□□□□ -1.31
LINC00963-201ENST00000412141 COX17Q14061 63 aa6.85□□□□□ -1.31
LINC00963-201ENST00000412141 FAM19A1Q7Z5A9 133 aa6.85□□□□□ -1.31
LINC00963-201ENST00000412141 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
LINC00963-201ENST00000412141 MUC2Q02817 5179 aa6.84□□□□□ -1.31
LINC00963-201ENST00000412141 TMEM223A0PJW6 202 aa6.84□□□□□ -1.31
LINC00963-201ENST00000412141 ATP6V1G1O75348 118 aa6.84□□□□□ -1.31
LINC00963-201ENST00000412141 HSBP1O75506 76 aa6.84□□□□□ -1.31
LINC00963-201ENST00000412141 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
LINC00963-201ENST00000412141 TMEM126AQ9H061 195 aa6.84□□□□□ -1.31
LINC00963-201ENST00000412141 TRAV12-1A0A0B4J245 112 aa6.83□□□□□ -1.32
LINC00963-201ENST00000412141 SMIM13P0DJ93 91 aa6.83□□□□□ -1.32
LINC00963-201ENST00000412141 M0R378 163 aa6.82□□□□□ -1.32
LINC00963-201ENST00000412141 TRGC2P03986 189 aa6.82□□□□□ -1.32
LINC00963-201ENST00000412141 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
LINC00963-201ENST00000412141 MEIG1Q5JSS6 88 aa6.82□□□□□ -1.32
LINC00963-201ENST00000412141 SFTA2Q6UW10 78 aa6.81□□□□□ -1.32
LINC00963-201ENST00000412141 SLC7A5P1Q8MH63 180 aa6.81□□□□□ -1.32
LINC00963-201ENST00000412141 BOD1L2Q8IYS8 172 aa6.8□□□□□ -1.32
LINC00963-201ENST00000412141 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
LINC00963-201ENST00000412141 IGKV2D-26A0A0A0MRZ7 120 aa6.79□□□□□ -1.32
LINC00963-201ENST00000412141 NCR3O14931 201 aa6.79□□□□□ -1.32
LINC00963-201ENST00000412141 SERF1AO75920 110 aa6.79□□□□□ -1.32
LINC00963-201ENST00000412141 FABP4P15090 132 aa6.79□□□□□ -1.32
LINC00963-201ENST00000412141 MIR7-3HGQ8N6C7 128 aa6.79□□□□□ -1.32
LINC00963-201ENST00000412141 NDUFA12Q9UI09 145 aa6.79□□□□□ -1.32
LINC00963-201ENST00000412141 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
LINC00963-201ENST00000412141 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
LINC00963-201ENST00000412141 RETNLBQ9BQ08 111 aa6.78□□□□□ -1.32
LINC00963-201ENST00000412141 PMCHL2Q9BQD1 86 aa6.78□□□□□ -1.32
LINC00963-201ENST00000412141 LINC00310P59036 64 aa6.77□□□□□ -1.33
LINC00963-201ENST00000412141 TSPEAR-AS2P59090 65 aa6.77□□□□□ -1.33
LINC00963-201ENST00000412141 FAM229BQ4G0N7 80 aa6.77□□□□□ -1.33
LINC00963-201ENST00000412141 DAND5Q8N907 189 aa6.77□□□□□ -1.33
LINC00963-201ENST00000412141 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
LINC00963-201ENST00000412141 MYMXA0A1B0GTQ4 84 aa6.76□□□□□ -1.33
LINC00963-201ENST00000412141 HERV-K104P63124 156 aa6.76□□□□□ -1.33
LINC00963-201ENST00000412141 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
LINC00963-201ENST00000412141 PPDPFQ9H3Y8 114 aa6.74□□□□□ -1.33
LINC00963-201ENST00000412141 TRBV10-3A0A0K0K1G6 114 aa6.73□□□□□ -1.33
LINC00963-201ENST00000412141 COLCA2A8K830 154 aa6.73□□□□□ -1.33
LINC00963-201ENST00000412141 LEPROTO15243 131 aa6.73□□□□□ -1.33
LINC00963-201ENST00000412141 DPM2O94777 84 aa6.73□□□□□ -1.33
LINC00963-201ENST00000412141 MAP1LC3CQ9BXW4 147 aa6.73□□□□□ -1.33
LINC00963-201ENST00000412141 HSPB8Q9UJY1 196 aa6.73□□□□□ -1.33
LINC00963-201ENST00000412141 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
LINC00963-201ENST00000412141 LINC00587B1AMM8 73 aa6.72□□□□□ -1.33
LINC00963-201ENST00000412141 J3QQQ9 107 aa6.72□□□□□ -1.33
LINC00963-201ENST00000412141 PRYO14603 147 aa6.72□□□□□ -1.33
LINC00963-201ENST00000412141 PLNP26678 52 aa6.72□□□□□ -1.33
LINC00963-201ENST00000412141 SMCR5Q8TEV8 140 aa6.72□□□□□ -1.33
LINC00963-201ENST00000412141 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
LINC00963-201ENST00000412141 IGKCP01834 107 aa6.71□□□□□ -1.34
LINC00963-201ENST00000412141 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
LINC00963-201ENST00000412141 HERVK_113P61574 105 aa6.71□□□□□ -1.34
LINC00963-201ENST00000412141 NPC2P61916 151 aa6.71□□□□□ -1.34
LINC00963-201ENST00000412141 KCNQ1DNQ9H478 68 aa6.7□□□□□ -1.34
LINC00963-201ENST00000412141 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
LINC00963-201ENST00000412141 MIEN1Q9BRT3 115 aa6.69□□□□□ -1.34
LINC00963-201ENST00000412141 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
LINC00963-201ENST00000412141 DDTP30046 118 aa6.68□□□□□ -1.34
LINC00963-201ENST00000412141 S100A12P80511 92 aa6.68□□□□□ -1.34
LINC00963-201ENST00000412141 C4orf48Q5BLP8 95 aa6.68□□□□□ -1.34
LINC00963-201ENST00000412141 GAGE2AQ6NT46 116 aa6.68□□□□□ -1.34
LINC00963-201ENST00000412141 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
LINC00963-201ENST00000412141 IGLV7-46A0A075B6I9 117 aa6.67□□□□□ -1.34
LINC00963-201ENST00000412141 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
LINC00963-201ENST00000412141 SPRR1AP35321 89 aa6.67□□□□□ -1.34
LINC00963-201ENST00000412141 S100A7L2Q5SY68 101 aa6.67□□□□□ -1.34
LINC00963-201ENST00000412141 B5MCH6 92 aa6.66□□□□□ -1.34
LINC00963-201ENST00000412141 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
LINC00963-201ENST00000412141 ERC2-IT1O76042 136 aa6.66□□□□□ -1.34
LINC00963-201ENST00000412141 NMUP48645 174 aa6.66□□□□□ -1.34
LINC00963-201ENST00000412141 ADAMTSL4-AS1Q5T5F5 129 aa6.66□□□□□ -1.34
LINC00963-201ENST00000412141 Q8NBF4 154 aa6.66□□□□□ -1.34
LINC00963-201ENST00000412141 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
LINC00963-201ENST00000412141 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
LINC00963-201ENST00000412141 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.34
LINC00963-201ENST00000412141 SPANXB1Q9NS25 103 aaPredicted RBP6.65□□□□□ -1.34
LINC00963-201ENST00000412141 IGLV9-49A0A0B4J1Y8 123 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 LOC107984156A0A0G2JMH3 177 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 SYS1-DBNDD2H3BUS1 97 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BKO60814 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BJP06899 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BOP23527 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BBP33778 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BDP58876 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BCP62807 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST2H2BEQ16778 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.64□□□□□ -1.35
LINC00963-201ENST00000412141 ARL17AQ8IVW1 177 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BHQ93079 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BNQ99877 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 HIST1H2BMQ99879 126 aa6.64□□□□□ -1.35
LINC00963-201ENST00000412141 E9PLD3 99 aa6.63□□□□□ -1.35
LINC00963-201ENST00000412141 SPAG11AQ6PDA7 123 aa6.63□□□□□ -1.35
LINC00963-201ENST00000412141 Q9BRP9 147 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms