RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 APOC3P02656 99 aa8.47□□□□□ -1.05
MCF2L-210ENST00000409954 NDUFA5Q16718 116 aa8.47□□□□□ -1.05
MCF2L-210ENST00000409954 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
MCF2L-210ENST00000409954 PLEKHB2Q96CS7 222 aa8.47□□□□□ -1.05
MCF2L-210ENST00000409954 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
MCF2L-210ENST00000409954 A0A0U1RQV1 116 aa8.46□□□□□ -1.06
MCF2L-210ENST00000409954 TMEM238C9JI98 176 aa8.46□□□□□ -1.06
MCF2L-210ENST00000409954 PRLHP81277 87 aa8.46□□□□□ -1.06
MCF2L-210ENST00000409954 CBLN2Q8IUK8 224 aa8.46□□□□□ -1.06
MCF2L-210ENST00000409954 SVBPQ8N300 66 aa8.46□□□□□ -1.06
MCF2L-210ENST00000409954 CHCHD1Q96BP2 118 aaKnown RBP8.46□□□□□ -1.06
MCF2L-210ENST00000409954 LINC00587B1AMM8 73 aa8.45□□□□□ -1.06
MCF2L-210ENST00000409954 ATP6V1G1O75348 118 aa8.45□□□□□ -1.06
MCF2L-210ENST00000409954 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
MCF2L-210ENST00000409954 IFI27L1Q96BM0 104 aa8.43□□□□□ -1.06
MCF2L-210ENST00000409954 HERV-K104P63124 156 aa8.42□□□□□ -1.06
MCF2L-210ENST00000409954 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
MCF2L-210ENST00000409954 Q8NDZ9 215 aa8.42□□□□□ -1.06
MCF2L-210ENST00000409954 HIGD2AQ9BW72 106 aa8.41□□□□□ -1.06
MCF2L-210ENST00000409954 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
MCF2L-210ENST00000409954 ZNF706Q9Y5V0 76 aaPredicted RBP8.4□□□□□ -1.06
MCF2L-210ENST00000409954 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
MCF2L-210ENST00000409954 BOD1L2Q8IYS8 172 aa8.39□□□□□ -1.07
MCF2L-210ENST00000409954 IGLV7-46A0A075B6I9 117 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 YPEL4Q96NS1 127 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 SPRR4Q96PI1 79 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 RETNLBQ9BQ08 111 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
MCF2L-210ENST00000409954 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
MCF2L-210ENST00000409954 PRYO14603 147 aa8.37□□□□□ -1.07
MCF2L-210ENST00000409954 HSBP1O75506 76 aa8.37□□□□□ -1.07
MCF2L-210ENST00000409954 S100A12P80511 92 aa8.37□□□□□ -1.07
MCF2L-210ENST00000409954 MIR7-3HGQ8N6C7 128 aa8.37□□□□□ -1.07
MCF2L-210ENST00000409954 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
MCF2L-210ENST00000409954 KCNQ1DNQ9H478 68 aa8.37□□□□□ -1.07
MCF2L-210ENST00000409954 C3orf22Q8N5N4 141 aa8.36□□□□□ -1.07
MCF2L-210ENST00000409954 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
MCF2L-210ENST00000409954 MUC2Q02817 5179 aa8.35□□□□□ -1.07
MCF2L-210ENST00000409954 SPRR1AP35321 89 aa8.35□□□□□ -1.07
MCF2L-210ENST00000409954 FAM19A2Q8N3H0 131 aa8.34□□□□□ -1.07
MCF2L-210ENST00000409954 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.07
MCF2L-210ENST00000409954 LOC107984156A0A0G2JMH3 177 aa8.33□□□□□ -1.08
MCF2L-210ENST00000409954 ETDCA0A1B0GVM5 59 aa8.33□□□□□ -1.08
MCF2L-210ENST00000409954 ARL17AQ8IVW1 177 aa8.33□□□□□ -1.08
MCF2L-210ENST00000409954 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
MCF2L-210ENST00000409954 KRTAP4-16G5E9R7 235 aaPredicted RBP8.32□□□□□ -1.08
MCF2L-210ENST00000409954 LEPROTL1O95214 131 aa8.32□□□□□ -1.08
MCF2L-210ENST00000409954 NCR3O14931 201 aa8.31□□□□□ -1.08
MCF2L-210ENST00000409954 LEPROTO15243 131 aa8.31□□□□□ -1.08
MCF2L-210ENST00000409954 FP248Q71RG6 208 aaPredicted RBP8.31□□□□□ -1.08
MCF2L-210ENST00000409954 TRBV10-3A0A0K0K1G6 114 aa8.3□□□□□ -1.08
MCF2L-210ENST00000409954 TRBV10-2A0A0K0K1G8 114 aa8.3□□□□□ -1.08
MCF2L-210ENST00000409954 SPINK1P00995 79 aa8.3□□□□□ -1.08
MCF2L-210ENST00000409954 H0Y8G0 127 aa8.29□□□□□ -1.08
MCF2L-210ENST00000409954 TRGC2P03986 189 aa8.29□□□□□ -1.08
MCF2L-210ENST00000409954 PLNP26678 52 aa8.29□□□□□ -1.08
MCF2L-210ENST00000409954 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
MCF2L-210ENST00000409954 NMUP48645 174 aa8.28□□□□□ -1.08
MCF2L-210ENST00000409954 HERVK_113P61574 105 aa8.28□□□□□ -1.08
MCF2L-210ENST00000409954 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
MCF2L-210ENST00000409954 B5MCH6 92 aa8.27□□□□□ -1.09
MCF2L-210ENST00000409954 J3QQQ9 107 aa8.27□□□□□ -1.09
MCF2L-210ENST00000409954 DDTP30046 118 aa8.27□□□□□ -1.09
MCF2L-210ENST00000409954 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
MCF2L-210ENST00000409954 Q8NBF4 154 aa8.27□□□□□ -1.09
MCF2L-210ENST00000409954 DPM2O94777 84 aa8.26□□□□□ -1.09
MCF2L-210ENST00000409954 NDUFC2O95298 119 aa8.26□□□□□ -1.09
MCF2L-210ENST00000409954 GAGE2AQ6NT46 116 aa8.26□□□□□ -1.09
MCF2L-210ENST00000409954 DAND5Q8N907 189 aa8.26□□□□□ -1.09
MCF2L-210ENST00000409954 MIEN1Q9BRT3 115 aa8.26□□□□□ -1.09
MCF2L-210ENST00000409954 SERF1AO75920 110 aa8.25□□□□□ -1.09
MCF2L-210ENST00000409954 IGKCP01834 107 aa8.24□□□□□ -1.09
MCF2L-210ENST00000409954 LGALS3P17931 250 aaKnown RBP8.24□□□□□ -1.09
MCF2L-210ENST00000409954 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
MCF2L-210ENST00000409954 S100A7L2Q5SY68 101 aa8.24□□□□□ -1.09
MCF2L-210ENST00000409954 SPANXB1Q9NS25 103 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-210ENST00000409954 FABP4P15090 132 aa8.23□□□□□ -1.09
MCF2L-210ENST00000409954 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
MCF2L-210ENST00000409954 JOSD1Q15040 202 aaPredicted RBP8.23□□□□□ -1.09
MCF2L-210ENST00000409954 IGLV6-57P01721 117 aa8.22□□□□□ -1.09
MCF2L-210ENST00000409954 LINC00310P59036 64 aa8.22□□□□□ -1.09
MCF2L-210ENST00000409954 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
MCF2L-210ENST00000409954 Q6ZRX8 168 aa8.22□□□□□ -1.09
MCF2L-210ENST00000409954 CBY1Q9Y3M2 126 aa8.22□□□□□ -1.09
MCF2L-210ENST00000409954 ERC2-IT1O76042 136 aa8.21□□□□□ -1.1
MCF2L-210ENST00000409954 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
MCF2L-210ENST00000409954 HINT1P49773 126 aaPredicted RBP8.2□□□□□ -1.1
MCF2L-210ENST00000409954 KRTAP13-3Q3SY46 172 aa8.2□□□□□ -1.1
MCF2L-210ENST00000409954 Q9BRP9 147 aa8.2□□□□□ -1.1
MCF2L-210ENST00000409954 IGLV9-49A0A0B4J1Y8 123 aa8.19□□□□□ -1.1
MCF2L-210ENST00000409954 PMCHL2Q9BQD1 86 aa8.19□□□□□ -1.1
MCF2L-210ENST00000409954 COLCA2A8K830 154 aa8.18□□□□□ -1.1
MCF2L-210ENST00000409954 SLC25A20O43772 301 aa8.18□□□□□ -1.1
MCF2L-210ENST00000409954 MOBPQ13875 183 aa8.18□□□□□ -1.1
MCF2L-210ENST00000409954 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
MCF2L-210ENST00000409954 TRAV23DV6A0A075B6W5 121 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 257.4 ms