RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NXT2Q9NPJ8 142 aaKnown RBP9.21□□□□□ -0.94
CHMP3-203ENST00000409225 ERASQ7Z444 233 aa9.2□□□□□ -0.94
CHMP3-203ENST00000409225 ADCYAP1P18509 176 aa9.19□□□□□ -0.94
CHMP3-203ENST00000409225 G0S2P27469 103 aa9.19□□□□□ -0.94
CHMP3-203ENST00000409225 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
CHMP3-203ENST00000409225 KRTAP9-7A8MTY7 169 aa9.18□□□□□ -0.94
CHMP3-203ENST00000409225 AKAP14Q86UN6 197 aa9.17□□□□□ -0.94
CHMP3-203ENST00000409225 H3BRM9 83 aa9.16□□□□□ -0.94
CHMP3-203ENST00000409225 SLC25A20O43772 301 aa9.16□□□□□ -0.94
CHMP3-203ENST00000409225 PEA15Q15121 130 aa9.16□□□□□ -0.94
CHMP3-203ENST00000409225 SMCR5Q8TEV8 140 aa9.16□□□□□ -0.94
CHMP3-203ENST00000409225 ZNF625Q96I27 306 aaPredicted RBP9.16□□□□□ -0.94
CHMP3-203ENST00000409225 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
CHMP3-203ENST00000409225 CST9LQ9H4G1 147 aa9.16□□□□□ -0.94
CHMP3-203ENST00000409225 IGLV8-61A0A075B6I0 122 aa9.15□□□□□ -0.94
CHMP3-203ENST00000409225 RPS29P62273 56 aaKnown RBP9.15□□□□□ -0.94
CHMP3-203ENST00000409225 MOBPQ13875 183 aa9.15□□□□□ -0.94
CHMP3-203ENST00000409225 PCOTHQ58A44 107 aa9.15□□□□□ -0.94
CHMP3-203ENST00000409225 IGLV9-49A0A0B4J1Y8 123 aa9.14□□□□□ -0.95
CHMP3-203ENST00000409225 M0R2T5 61 aa9.13□□□□□ -0.95
CHMP3-203ENST00000409225 COX17Q14061 63 aa9.13□□□□□ -0.95
CHMP3-203ENST00000409225 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
CHMP3-203ENST00000409225 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.12□□□□□ -0.95
CHMP3-203ENST00000409225 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
CHMP3-203ENST00000409225 GAGE2AQ6NT46 116 aa9.12□□□□□ -0.95
CHMP3-203ENST00000409225 PMVKQ15126 192 aa9.11□□□□□ -0.95
CHMP3-203ENST00000409225 PRYO14603 147 aa9.1□□□□□ -0.95
CHMP3-203ENST00000409225 SSBP3-AS1Q7Z2R9 100 aa9.1□□□□□ -0.95
CHMP3-203ENST00000409225 TMEM238LA0A1B0GVL6 79 aa9.09□□□□□ -0.95
CHMP3-203ENST00000409225 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
CHMP3-203ENST00000409225 ETDCA0A1B0GVM5 59 aa9.08□□□□□ -0.96
CHMP3-203ENST00000409225 FLGP20930 4061 aaPredicted RBP9.08□□□□□ -0.96
CHMP3-203ENST00000409225 IGLC3P0DOY3 106 aa9.06□□□□□ -0.96
CHMP3-203ENST00000409225 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-203ENST00000409225 SPRR1AP35321 89 aa9.06□□□□□ -0.96
CHMP3-203ENST00000409225 LINC00158P58513 81 aa9.06□□□□□ -0.96
CHMP3-203ENST00000409225 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
CHMP3-203ENST00000409225 LINC01549A6NIU2 74 aa9.05□□□□□ -0.96
CHMP3-203ENST00000409225 NCR3O14931 201 aa9.05□□□□□ -0.96
CHMP3-203ENST00000409225 C9orf92A6NGG3 77 aa9.04□□□□□ -0.96
CHMP3-203ENST00000409225 KRTAP4-16G5E9R7 235 aaPredicted RBP9.04□□□□□ -0.96
CHMP3-203ENST00000409225 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
CHMP3-203ENST00000409225 ERC2-IT1O76042 136 aa9.03□□□□□ -0.96
CHMP3-203ENST00000409225 NDUFA6P56556 154 aa9.03□□□□□ -0.96
CHMP3-203ENST00000409225 ANAPC16Q96DE5 110 aa9.03□□□□□ -0.96
CHMP3-203ENST00000409225 MT-ND4LP03901 98 aa9.02□□□□□ -0.97
CHMP3-203ENST00000409225 hCG_2014768A0A024R1R8 64 aa9.01□□□□□ -0.97
CHMP3-203ENST00000409225 LINC01546A6NGU7 62 aa9.01□□□□□ -0.97
CHMP3-203ENST00000409225 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
CHMP3-203ENST00000409225 SFTA2Q6UW10 78 aa9.01□□□□□ -0.97
CHMP3-203ENST00000409225 BOD1L2Q8IYS8 172 aa9.01□□□□□ -0.97
CHMP3-203ENST00000409225 COX6B2Q6YFQ2 88 aa9□□□□□ -0.97
CHMP3-203ENST00000409225 TRBV10-3A0A0K0K1G6 114 aa8.99□□□□□ -0.97
CHMP3-203ENST00000409225 B5MCH6 92 aa8.99□□□□□ -0.97
CHMP3-203ENST00000409225 SSPOA2VEC9 5147 aa8.99□□□□□ -0.97
CHMP3-203ENST00000409225 USH2AO75445 5202 aa8.97□□□□□ -0.97
CHMP3-203ENST00000409225 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
CHMP3-203ENST00000409225 TMEM170BQ5T4T1 132 aa8.97□□□□□ -0.97
CHMP3-203ENST00000409225 FA2HQ7L5A8 372 aa8.97□□□□□ -0.97
CHMP3-203ENST00000409225 C11orf86A6NJI1 115 aa8.96□□□□□ -0.98
CHMP3-203ENST00000409225 SMIM13P0DJ93 91 aa8.96□□□□□ -0.98
CHMP3-203ENST00000409225 Q9BRP9 147 aa8.96□□□□□ -0.98
CHMP3-203ENST00000409225 SMCO4Q9NRQ5 59 aa8.96□□□□□ -0.98
CHMP3-203ENST00000409225 TRAV9-1A0A075B6T8 112 aa8.95□□□□□ -0.98
CHMP3-203ENST00000409225 S100A12P80511 92 aa8.95□□□□□ -0.98
CHMP3-203ENST00000409225 MIR7-3HGQ8N6C7 128 aa8.93□□□□□ -0.98
CHMP3-203ENST00000409225 MEIG1Q5JSS6 88 aa8.92□□□□□ -0.98
CHMP3-203ENST00000409225 HRCT1Q6UXD1 115 aa8.92□□□□□ -0.98
CHMP3-203ENST00000409225 IGLV6-57P01721 117 aa8.91□□□□□ -0.98
CHMP3-203ENST00000409225 Q6ZRX8 168 aa8.91□□□□□ -0.98
CHMP3-203ENST00000409225 LIMD2Q9BT23 127 aa8.91□□□□□ -0.98
CHMP3-203ENST00000409225 A0A096LNJ9 63 aa8.9□□□□□ -0.98
CHMP3-203ENST00000409225 DDTP30046 118 aa8.89□□□□□ -0.99
CHMP3-203ENST00000409225 BAGE3Q86Y29 109 aa8.89□□□□□ -0.99
CHMP3-203ENST00000409225 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
CHMP3-203ENST00000409225 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
CHMP3-203ENST00000409225 EIF4EBP3O60516 100 aaPredicted RBP8.86□□□□□ -0.99
CHMP3-203ENST00000409225 PMCHL1Q16048 86 aa8.86□□□□□ -0.99
CHMP3-203ENST00000409225 FCGBPQ9Y6R7 5405 aaPredicted RBP8.85□□□□□ -0.99
CHMP3-203ENST00000409225 HBDP02042 147 aa8.84□□□□□ -0.99
CHMP3-203ENST00000409225 CHTOPQ9Y3Y2 248 aaKnown RBP8.84□□□□□ -0.99
CHMP3-203ENST00000409225 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
CHMP3-203ENST00000409225 FABP9Q0Z7S8 132 aa8.83□□□□□ -1
CHMP3-203ENST00000409225 JOSD1Q15040 202 aaPredicted RBP8.83□□□□□ -1
CHMP3-203ENST00000409225 HERV-K104P63124 156 aa8.82□□□□□ -1
CHMP3-203ENST00000409225 URB1-AS1Q96HZ7 61 aa8.82□□□□□ -1
CHMP3-203ENST00000409225 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
CHMP3-203ENST00000409225 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
CHMP3-203ENST00000409225 LINC00587B1AMM8 73 aa8.8□□□□□ -1
CHMP3-203ENST00000409225 LINC00614P0C842 121 aa8.79□□□□□ -1
CHMP3-203ENST00000409225 S100A7L2Q5SY68 101 aa8.79□□□□□ -1
CHMP3-203ENST00000409225 Q6Q795 121 aa8.79□□□□□ -1
CHMP3-203ENST00000409225 TRAV23DV6A0A075B6W5 121 aa8.78□□□□□ -1
CHMP3-203ENST00000409225 S100PP25815 95 aa8.78□□□□□ -1
CHMP3-203ENST00000409225 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
CHMP3-203ENST00000409225 MYMXA0A1B0GTQ4 84 aa8.77□□□□□ -1.01
CHMP3-203ENST00000409225 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
CHMP3-203ENST00000409225 H7C2G1 150 aa8.76□□□□□ -1.01
CHMP3-203ENST00000409225 CFC1P0CG37 223 aa8.76□□□□□ -1.01
CHMP3-203ENST00000409225 COX19Q49B96 90 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms