RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 FAM19A1Q7Z5A9 133 aa13.16□□□□□ -0.3
KDELR3-202ENST00000409006 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
KDELR3-202ENST00000409006 A0A0U1RRA0 63 aa13.14□□□□□ -0.31
KDELR3-202ENST00000409006 IFI27L1Q96BM0 104 aa13.14□□□□□ -0.31
KDELR3-202ENST00000409006 TRAV12-1A0A0B4J245 112 aa13.13□□□□□ -0.31
KDELR3-202ENST00000409006 FAM229BQ4G0N7 80 aa13.13□□□□□ -0.31
KDELR3-202ENST00000409006 CHCHD1Q96BP2 118 aaKnown RBP13.13□□□□□ -0.31
KDELR3-202ENST00000409006 LINC00158P58513 81 aa13.12□□□□□ -0.31
KDELR3-202ENST00000409006 SFTA2Q6UW10 78 aa13.12□□□□□ -0.31
KDELR3-202ENST00000409006 FAM19A2Q8N3H0 131 aa13.09□□□□□ -0.31
KDELR3-202ENST00000409006 PLEKHB2Q96CS7 222 aa13.08□□□□□ -0.32
KDELR3-202ENST00000409006 SMIM13P0DJ93 91 aa13.07□□□□□ -0.32
KDELR3-202ENST00000409006 CBLN2Q8IUK8 224 aa13.07□□□□□ -0.32
KDELR3-202ENST00000409006 LINC00304Q8N9R0 145 aa13.06□□□□□ -0.32
KDELR3-202ENST00000409006 RETNLBQ9BQ08 111 aa13.06□□□□□ -0.32
KDELR3-202ENST00000409006 IGKV2D-26A0A0A0MRZ7 120 aa13.04□□□□□ -0.32
KDELR3-202ENST00000409006 HSBP1O75506 76 aa13.04□□□□□ -0.32
KDELR3-202ENST00000409006 HIGD2AQ9BW72 106 aa13.04□□□□□ -0.32
KDELR3-202ENST00000409006 C3orf22Q8N5N4 141 aa13.03□□□□□ -0.32
KDELR3-202ENST00000409006 LINC00310P59036 64 aa13.02□□□□□ -0.33
KDELR3-202ENST00000409006 MEIG1Q5JSS6 88 aa13.02□□□□□ -0.33
KDELR3-202ENST00000409006 MIR7-3HGQ8N6C7 128 aa13.02□□□□□ -0.33
KDELR3-202ENST00000409006 H0Y8G0 127 aa13.01□□□□□ -0.33
KDELR3-202ENST00000409006 TRGC2P03986 189 aa13.01□□□□□ -0.33
KDELR3-202ENST00000409006 BOD1L2Q8IYS8 172 aa13.01□□□□□ -0.33
KDELR3-202ENST00000409006 MUC2Q02817 5179 aa13.01□□□□□ -0.33
KDELR3-202ENST00000409006 NCR3O14931 201 aa12.99□□□□□ -0.33
KDELR3-202ENST00000409006 ATP6V1G1O75348 118 aa12.99□□□□□ -0.33
KDELR3-202ENST00000409006 NDUFA12Q9UI09 145 aa12.99□□□□□ -0.33
KDELR3-202ENST00000409006 TSPEAR-AS2P59090 65 aa12.98□□□□□ -0.33
KDELR3-202ENST00000409006 SPRR4Q96PI1 79 aa12.98□□□□□ -0.33
KDELR3-202ENST00000409006 HERV-K104P63124 156 aa12.97□□□□□ -0.33
KDELR3-202ENST00000409006 SERF1AO75920 110 aa12.96□□□□□ -0.33
KDELR3-202ENST00000409006 PRYO14603 147 aa12.95□□□□□ -0.34
KDELR3-202ENST00000409006 LEPROTL1O95214 131 aa12.95□□□□□ -0.34
KDELR3-202ENST00000409006 SPRR1AP35321 89 aa12.95□□□□□ -0.34
KDELR3-202ENST00000409006 MYMXA0A1B0GTQ4 84 aa12.94□□□□□ -0.34
KDELR3-202ENST00000409006 KRTAP4-16G5E9R7 235 aaPredicted RBP12.94□□□□□ -0.34
KDELR3-202ENST00000409006 KCNQ1DNQ9H478 68 aa12.94□□□□□ -0.34
KDELR3-202ENST00000409006 DAND5Q8N907 189 aa12.93□□□□□ -0.34
KDELR3-202ENST00000409006 TRBV10-3A0A0K0K1G6 114 aa12.92□□□□□ -0.34
KDELR3-202ENST00000409006 LINC00337Q8N6G1 96 aa12.92□□□□□ -0.34
KDELR3-202ENST00000409006 LEPROTO15243 131 aa12.91□□□□□ -0.34
KDELR3-202ENST00000409006 SMCR5Q8TEV8 140 aa12.91□□□□□ -0.34
KDELR3-202ENST00000409006 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
KDELR3-202ENST00000409006 PMCHL2Q9BQD1 86 aa12.9□□□□□ -0.34
KDELR3-202ENST00000409006 FABP4P15090 132 aa12.89□□□□□ -0.35
KDELR3-202ENST00000409006 MAP1LC3CQ9BXW4 147 aa12.89□□□□□ -0.35
KDELR3-202ENST00000409006 IGLV7-46A0A075B6I9 117 aa12.88□□□□□ -0.35
KDELR3-202ENST00000409006 SLC7A5P1Q8MH63 180 aa12.88□□□□□ -0.35
KDELR3-202ENST00000409006 PPDPFQ9H3Y8 114 aa12.88□□□□□ -0.35
KDELR3-202ENST00000409006 LOC107984156A0A0G2JMH3 177 aa12.87□□□□□ -0.35
KDELR3-202ENST00000409006 PLNP26678 52 aa12.87□□□□□ -0.35
KDELR3-202ENST00000409006 CTAG1AP78358 180 aa12.87□□□□□ -0.35
KDELR3-202ENST00000409006 ARL17AQ8IVW1 177 aa12.87□□□□□ -0.35
KDELR3-202ENST00000409006 ZNF706Q9Y5V0 76 aaPredicted RBP12.87□□□□□ -0.35
KDELR3-202ENST00000409006 MUC17Q685J3 4493 aa12.86□□□□□ -0.35
KDELR3-202ENST00000409006 ETDCA0A1B0GVM5 59 aa12.86□□□□□ -0.35
KDELR3-202ENST00000409006 J3QQQ9 107 aa12.86□□□□□ -0.35
KDELR3-202ENST00000409006 TPRXLQ17RH7 258 aa12.86□□□□□ -0.35
KDELR3-202ENST00000409006 COLCA2A8K830 154 aa12.85□□□□□ -0.35
KDELR3-202ENST00000409006 DPM2O94777 84 aa12.85□□□□□ -0.35
KDELR3-202ENST00000409006 HSPB8Q9UJY1 196 aa12.85□□□□□ -0.35
KDELR3-202ENST00000409006 B5MCH6 92 aa12.83□□□□□ -0.36
KDELR3-202ENST00000409006 ERC2-IT1O76042 136 aa12.83□□□□□ -0.36
KDELR3-202ENST00000409006 SPAG11AQ6PDA7 123 aa12.83□□□□□ -0.36
KDELR3-202ENST00000409006 Q8NBF4 154 aa12.83□□□□□ -0.36
KDELR3-202ENST00000409006 CDIP1Q9H305 208 aa12.83□□□□□ -0.36
KDELR3-202ENST00000409006 IGKCP01834 107 aa12.82□□□□□ -0.36
KDELR3-202ENST00000409006 DDTP30046 118 aa12.81□□□□□ -0.36
KDELR3-202ENST00000409006 TRBV10-2A0A0K0K1G8 114 aa12.8□□□□□ -0.36
KDELR3-202ENST00000409006 LGALS3P17931 250 aaKnown RBP12.8□□□□□ -0.36
KDELR3-202ENST00000409006 HERVK_113P61574 105 aa12.8□□□□□ -0.36
KDELR3-202ENST00000409006 LINC00483Q53H64 154 aa12.8□□□□□ -0.36
KDELR3-202ENST00000409006 EIF4EBP3O60516 100 aaPredicted RBP12.79□□□□□ -0.36
KDELR3-202ENST00000409006 NMUP48645 174 aa12.79□□□□□ -0.36
KDELR3-202ENST00000409006 GAGE2AQ6NT46 116 aa12.79□□□□□ -0.36
KDELR3-202ENST00000409006 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
KDELR3-202ENST00000409006 Q9BRP9 147 aa12.79□□□□□ -0.36
KDELR3-202ENST00000409006 C4orf48Q5BLP8 95 aa12.78□□□□□ -0.36
KDELR3-202ENST00000409006 S100A12P80511 92 aa12.77□□□□□ -0.37
KDELR3-202ENST00000409006 ADAMTSL4-AS1Q5T5F5 129 aa12.77□□□□□ -0.37
KDELR3-202ENST00000409006 SPANXB1Q9NS25 103 aaPredicted RBP12.77□□□□□ -0.37
KDELR3-202ENST00000409006 A0A0U1RQV1 116 aa12.76□□□□□ -0.37
KDELR3-202ENST00000409006 NPC2P61916 151 aa12.76□□□□□ -0.37
KDELR3-202ENST00000409006 IGLV6-57P01721 117 aa12.75□□□□□ -0.37
KDELR3-202ENST00000409006 MIEN1Q9BRT3 115 aa12.75□□□□□ -0.37
KDELR3-202ENST00000409006 A0A0J9YXY3 114 aa12.74□□□□□ -0.37
KDELR3-202ENST00000409006 NDUFC2O95298 119 aa12.74□□□□□ -0.37
KDELR3-202ENST00000409006 Q6ZRX8 168 aa12.74□□□□□ -0.37
KDELR3-202ENST00000409006 IGLV9-49A0A0B4J1Y8 123 aa12.72□□□□□ -0.37
KDELR3-202ENST00000409006 E9PLD3 99 aa12.72□□□□□ -0.37
KDELR3-202ENST00000409006 MOBPQ13875 183 aa12.72□□□□□ -0.37
KDELR3-202ENST00000409006 S100A7L2Q5SY68 101 aa12.72□□□□□ -0.37
KDELR3-202ENST00000409006 FP248Q71RG6 208 aaPredicted RBP12.71□□□□□ -0.37
KDELR3-202ENST00000409006 SPINK1P00995 79 aa12.7□□□□□ -0.38
KDELR3-202ENST00000409006 FAT4Q6V0I7 4981 aa12.7□□□□□ -0.38
KDELR3-202ENST00000409006 TRAV23DV6A0A075B6W5 121 aa12.69□□□□□ -0.38
KDELR3-202ENST00000409006 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
KDELR3-202ENST00000409006 LCE2AQ5TA79 106 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms