RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TENM3Q9P273 2699 aa6.65□□□□□ -1.34
MSH2-202ENST00000406134 REG3AQ06141 175 aa6.65□□□□□ -1.34
MSH2-202ENST00000406134 FBN1P35555 2871 aaKnown RBP6.65□□□□□ -1.35
MSH2-202ENST00000406134 INAFM1C9JVW0 142 aa6.65□□□□□ -1.35
MSH2-202ENST00000406134 NDUFC2O95298 119 aa6.65□□□□□ -1.35
MSH2-202ENST00000406134 DNAH9Q9NYC9 4486 aa6.65□□□□□ -1.35
MSH2-202ENST00000406134 C9orf66Q5T8R8 295 aa6.64□□□□□ -1.35
MSH2-202ENST00000406134 PRR34Q9NV39 138 aa6.64□□□□□ -1.35
MSH2-202ENST00000406134 LINC00846Q9NV44 126 aa6.64□□□□□ -1.35
MSH2-202ENST00000406134 COX17Q14061 63 aa6.64□□□□□ -1.35
MSH2-202ENST00000406134 F8P00451 2351 aa6.64□□□□□ -1.35
MSH2-202ENST00000406134 RPS28P62857 69 aaKnown RBP6.64□□□□□ -1.35
MSH2-202ENST00000406134 ENHOQ6UWT2 76 aa6.63□□□□□ -1.35
MSH2-202ENST00000406134 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
MSH2-202ENST00000406134 Q8N814 137 aa6.63□□□□□ -1.35
MSH2-202ENST00000406134 C2orf48Q96LS8 159 aa6.63□□□□□ -1.35
MSH2-202ENST00000406134 ANGP03950 147 aaKnown RBP6.62□□□□□ -1.35
MSH2-202ENST00000406134 CXCL5P42830 114 aa6.62□□□□□ -1.35
MSH2-202ENST00000406134 UNQ6190/PRO20217Q6UXQ8 127 aa6.62□□□□□ -1.35
MSH2-202ENST00000406134 DPH3Q96FX2 82 aa6.62□□□□□ -1.35
MSH2-202ENST00000406134 COX7CP15954 63 aa6.61□□□□□ -1.35
MSH2-202ENST00000406134 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
MSH2-202ENST00000406134 DNAH7Q8WXX0 4024 aa6.61□□□□□ -1.35
MSH2-202ENST00000406134 A0A0J9YWU9 116 aa6.6□□□□□ -1.35
MSH2-202ENST00000406134 DNAL4O96015 105 aa6.6□□□□□ -1.35
MSH2-202ENST00000406134 IGHV4-30-4P0DP06 118 aa6.6□□□□□ -1.35
MSH2-202ENST00000406134 MIFP14174 115 aa6.6□□□□□ -1.35
MSH2-202ENST00000406134 DAD1P61803 113 aa6.6□□□□□ -1.35
MSH2-202ENST00000406134 PRO0628Q9UI54 55 aa6.6□□□□□ -1.35
MSH2-202ENST00000406134 V9GYY9 64 aa6.6□□□□□ -1.35
MSH2-202ENST00000406134 LELP1Q5T871 98 aa6.59□□□□□ -1.35
MSH2-202ENST00000406134 IGLV6-57P01721 117 aa6.59□□□□□ -1.35
MSH2-202ENST00000406134 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
MSH2-202ENST00000406134 A0A0U1RQV1 116 aa6.59□□□□□ -1.35
MSH2-202ENST00000406134 APOC4P55056 127 aa6.59□□□□□ -1.35
MSH2-202ENST00000406134 WFDC9Q8NEX5 89 aa6.59□□□□□ -1.35
MSH2-202ENST00000406134 ORMDL1Q9P0S3 153 aa6.59□□□□□ -1.35
MSH2-202ENST00000406134 OXTP01178 125 aa6.58□□□□□ -1.36
MSH2-202ENST00000406134 CYSRT1A8MQ03 144 aa6.58□□□□□ -1.36
MSH2-202ENST00000406134 CCKP06307 115 aa6.58□□□□□ -1.36
MSH2-202ENST00000406134 C6orf99Q4VX62 202 aa6.58□□□□□ -1.36
MSH2-202ENST00000406134 LINC00336Q6ZUF6 198 aa6.58□□□□□ -1.36
MSH2-202ENST00000406134 C6orf48Q9UBA6 75 aa6.58□□□□□ -1.36
MSH2-202ENST00000406134 MAST4O15021 2626 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 FAM236DA0A1B0GTK5 79 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 FAM236CP0DP71 79 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 Q5XG85 94 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 Q6JHZ5 121 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 LYPD5Q6UWN5 251 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 LINC00575Q6W349 94 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 MGAM2Q2M2H8 2515 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 GVQW2A0A096LPI5 108 aaPredicted RBP6.57□□□□□ -1.36
MSH2-202ENST00000406134 M0R2N4 97 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 TMEM258P61165 79 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
MSH2-202ENST00000406134 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
MSH2-202ENST00000406134 A0A087WVE0 104 aa6.56□□□□□ -1.36
MSH2-202ENST00000406134 CRYGAP11844 174 aa6.56□□□□□ -1.36
MSH2-202ENST00000406134 KRTAP10-11P60412 298 aa6.56□□□□□ -1.36
MSH2-202ENST00000406134 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
MSH2-202ENST00000406134 IGKV3D-7A0A0C4DH55 119 aa6.56□□□□□ -1.36
MSH2-202ENST00000406134 RETNQ9HD89 108 aa6.55□□□□□ -1.36
MSH2-202ENST00000406134 SPART-AS1P0CW21 52 aa6.55□□□□□ -1.36
MSH2-202ENST00000406134 WFDC10BQ8IUB3 73 aa6.55□□□□□ -1.36
MSH2-202ENST00000406134 ATOX1O00244 68 aa6.54□□□□□ -1.36
MSH2-202ENST00000406134 HTN3P15516 51 aa6.54□□□□□ -1.36
MSH2-202ENST00000406134 C15orf56Q8N910 161 aa6.54□□□□□ -1.36
MSH2-202ENST00000406134 UPK3BQ9BT76 320 aa6.53□□□□□ -1.36
MSH2-202ENST00000406134 TMEM256-PLSCR3K7ERE1 68 aa6.53□□□□□ -1.36
MSH2-202ENST00000406134 Q6ZQT0 140 aa6.53□□□□□ -1.36
MSH2-202ENST00000406134 RPL18AQ02543 176 aaKnown RBP6.52□□□□□ -1.36
MSH2-202ENST00000406134 NBEAL1Q6ZS30 2694 aa6.52□□□□□ -1.37
MSH2-202ENST00000406134 C1orf195Q5TG92 126 aa6.52□□□□□ -1.37
MSH2-202ENST00000406134 COL7A1Q02388 2944 aa6.52□□□□□ -1.37
MSH2-202ENST00000406134 TRBV10-3A0A0K0K1G6 114 aa6.52□□□□□ -1.37
MSH2-202ENST00000406134 MUC7Q8TAX7 377 aa6.52□□□□□ -1.37
MSH2-202ENST00000406134 BRK1Q8WUW1 75 aa6.51□□□□□ -1.37
MSH2-202ENST00000406134 JMJD7-PLA2G4BH0Y9G9 81 aa6.51□□□□□ -1.37
MSH2-202ENST00000406134 VPREB1P12018 145 aa6.51□□□□□ -1.37
MSH2-202ENST00000406134 XAGE1AQ9HD64 81 aa6.51□□□□□ -1.37
MSH2-202ENST00000406134 LOC110117498A0A087WWA1 95 aa6.5□□□□□ -1.37
MSH2-202ENST00000406134 OXLD1Q5BKU9 147 aa6.5□□□□□ -1.37
MSH2-202ENST00000406134 Q6ZTC4 211 aa6.5□□□□□ -1.37
MSH2-202ENST00000406134 H3BNG1 76 aa6.49□□□□□ -1.37
MSH2-202ENST00000406134 KPRPQ5T749 579 aaPredicted RBP6.49□□□□□ -1.37
MSH2-202ENST00000406134 ESRGQ1W209 222 aa6.49□□□□□ -1.37
MSH2-202ENST00000406134 HIGD2BQ4VC39 106 aa6.49□□□□□ -1.37
MSH2-202ENST00000406134 S100A7L2Q5SY68 101 aa6.49□□□□□ -1.37
MSH2-202ENST00000406134 Q6ZRU5 148 aa6.49□□□□□ -1.37
MSH2-202ENST00000406134 NOTCH1P46531 2555 aa6.49□□□□□ -1.37
MSH2-202ENST00000406134 FAM19A1Q7Z5A9 133 aa6.48□□□□□ -1.37
MSH2-202ENST00000406134 TRAV23DV6A0A075B6W5 121 aa6.48□□□□□ -1.37
MSH2-202ENST00000406134 ZNF561-AS1K7EIQ3 104 aa6.48□□□□□ -1.37
MSH2-202ENST00000406134 SERP2Q8N6R1 65 aa6.48□□□□□ -1.37
MSH2-202ENST00000406134 ELOF1P60002 83 aaKnown RBP6.48□□□□□ -1.37
MSH2-202ENST00000406134 BAHCC1Q9P281 2608 aa6.47□□□□□ -1.37
MSH2-202ENST00000406134 EGFEM1PQ0D2K5 195 aa6.47□□□□□ -1.37
MSH2-202ENST00000406134 Q6ZQY7 126 aa6.47□□□□□ -1.37
MSH2-202ENST00000406134 USP17L23D6RBM5 183 aa6.46□□□□□ -1.37
MSH2-202ENST00000406134 Q6ZRP5 223 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms