RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 DLEU1O43261 78 aa21.01■□□□□ 0.95
CSNK1E-204ENST00000403904 FAM19A5Q7Z5A7 132 aaPredicted RBP21.01■□□□□ 0.95
CSNK1E-204ENST00000403904 NPC2P61916 151 aa21■□□□□ 0.95
CSNK1E-204ENST00000403904 SLC25A34Q6PIV7 304 aa21■□□□□ 0.95
CSNK1E-204ENST00000403904 KRTAP7-1Q8IUC3 87 aa21■□□□□ 0.95
CSNK1E-204ENST00000403904 RYR1P21817 5038 aa20.99■□□□□ 0.95
CSNK1E-204ENST00000403904 TMEM238C9JI98 176 aa20.99■□□□□ 0.95
CSNK1E-204ENST00000403904 CDK2AP2O75956 126 aa20.99■□□□□ 0.95
CSNK1E-204ENST00000403904 SERTAD4-AS1Q5TG53 156 aa20.99■□□□□ 0.95
CSNK1E-204ENST00000403904 EIF4EBP3O60516 100 aaPredicted RBP20.95■□□□□ 0.94
CSNK1E-204ENST00000403904 HSPG2P98160 4391 aa20.94■□□□□ 0.94
CSNK1E-204ENST00000403904 EPM2AB3EWF7 344 aa20.94■□□□□ 0.94
CSNK1E-204ENST00000403904 SOSTDC1Q6X4U4 206 aa20.94■□□□□ 0.94
CSNK1E-204ENST00000403904 Q8NDZ9 215 aa20.94■□□□□ 0.94
CSNK1E-204ENST00000403904 MIEN1Q9BRT3 115 aa20.94■□□□□ 0.94
CSNK1E-204ENST00000403904 SPANXDQ9BXN6 97 aa20.94■□□□□ 0.94
CSNK1E-204ENST00000403904 SPANXCQ9NY87 97 aa20.94■□□□□ 0.94
CSNK1E-204ENST00000403904 PLA2G2DQ9UNK4 145 aa20.94■□□□□ 0.94
CSNK1E-204ENST00000403904 LOC107984156A0A0G2JMH3 177 aa20.92■□□□□ 0.94
CSNK1E-204ENST00000403904 ARL17AQ8IVW1 177 aa20.92■□□□□ 0.94
CSNK1E-204ENST00000403904 LINC00308Q8TCZ7 52 aa20.92■□□□□ 0.94
CSNK1E-204ENST00000403904 M0QXV9 152 aa20.89■□□□□ 0.94
CSNK1E-204ENST00000403904 VPREB1P12018 145 aa20.89■□□□□ 0.94
CSNK1E-204ENST00000403904 C12orf57Q99622 126 aa20.89■□□□□ 0.94
CSNK1E-204ENST00000403904 PHF5AQ7RTV0 110 aaKnown RBP20.89■□□□□ 0.93
CSNK1E-204ENST00000403904 C22orf24Q9Y442 160 aa20.89■□□□□ 0.93
CSNK1E-204ENST00000403904 RPL24P83731 157 aaKnown RBP20.88■□□□□ 0.93
CSNK1E-204ENST00000403904 SRSF9Q13242 221 aaKnown RBP eCLIP20.88■□□□□ 0.93
CSNK1E-204ENST00000403904 SPANXB1Q9NS25 103 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-204ENST00000403904 C2orf91Q6ZV80 131 aa20.87■□□□□ 0.93
CSNK1E-204ENST00000403904 Q6ZVH6 145 aa20.87■□□□□ 0.93
CSNK1E-204ENST00000403904 SMR3BP02814 79 aaPredicted RBP20.86■□□□□ 0.93
CSNK1E-204ENST00000403904 PRR3P79522 188 aaKnown RBP20.85■□□□□ 0.93
CSNK1E-204ENST00000403904 NKAPP1Q8N9T2 125 aa20.85■□□□□ 0.93
CSNK1E-204ENST00000403904 PRO1933Q9H354 126 aa20.85■□□□□ 0.93
CSNK1E-204ENST00000403904 IGLV5-37A0A075B6J1 123 aa20.85■□□□□ 0.93
CSNK1E-204ENST00000403904 MUSTN1Q8IVN3 82 aa20.84■□□□□ 0.93
CSNK1E-204ENST00000403904 HIGD1BQ9P298 99 aa20.84■□□□□ 0.93
CSNK1E-204ENST00000403904 UQCR10Q9UDW1 63 aa20.83■□□□□ 0.92
CSNK1E-204ENST00000403904 IFITM1P13164 125 aa20.82■□□□□ 0.92
CSNK1E-204ENST00000403904 FAT1Q14517 4588 aa20.82■□□□□ 0.92
CSNK1E-204ENST00000403904 MRPL55Q7Z7F7 128 aaKnown RBP20.8■□□□□ 0.92
CSNK1E-204ENST00000403904 LINC00518Q8N0U6 118 aa20.8■□□□□ 0.92
CSNK1E-204ENST00000403904 HIST1H4GQ99525 98 aa20.8■□□□□ 0.92
CSNK1E-204ENST00000403904 GAGE10A6NGK3 116 aa20.79■□□□□ 0.92
CSNK1E-204ENST00000403904 NCR3O14931 201 aa20.79■□□□□ 0.92
CSNK1E-204ENST00000403904 COPS9Q8WXC6 57 aa20.79■□□□□ 0.92
CSNK1E-204ENST00000403904 NDUFC2O95298 119 aa20.77■□□□□ 0.92
CSNK1E-204ENST00000403904 C7orf33Q8WU49 177 aa20.77■□□□□ 0.92
CSNK1E-204ENST00000403904 LBHQ53QV2 105 aaPredicted RBP20.76■□□□□ 0.91
CSNK1E-204ENST00000403904 LINC00167Q96N53 147 aa20.76■□□□□ 0.91
CSNK1E-204ENST00000403904 LINC00528Q8N1L1 170 aa20.74■□□□□ 0.91
CSNK1E-204ENST00000403904 PPDPFQ9H3Y8 114 aa20.74■□□□□ 0.91
CSNK1E-204ENST00000403904 M0R378 163 aa20.73■□□□□ 0.91
CSNK1E-204ENST00000403904 UBE2BP63146 152 aa20.73■□□□□ 0.91
CSNK1E-204ENST00000403904 KRTAP11-1Q8IUC1 163 aa20.73■□□□□ 0.91
CSNK1E-204ENST00000403904 RPL37AP8A6NKH3 93 aa20.72■□□□□ 0.91
CSNK1E-204ENST00000403904 VPS13BQ7Z7G8 4022 aa20.7■□□□□ 0.9
CSNK1E-204ENST00000403904 IGKV2-28A0A075B6P5 120 aa20.68■□□□□ 0.9
CSNK1E-204ENST00000403904 TRBV10-2A0A0K0K1G8 114 aa20.68■□□□□ 0.9
CSNK1E-204ENST00000403904 IGKV2D-28P01615 120 aa20.68■□□□□ 0.9
CSNK1E-204ENST00000403904 KRTAP17-1Q9BYP8 105 aa20.68■□□□□ 0.9
CSNK1E-204ENST00000403904 HNRNPA3P51991 378 aaKnown RBP20.67■□□□□ 0.9
CSNK1E-204ENST00000403904 TAL2Q16559 108 aa20.65■□□□□ 0.9
CSNK1E-204ENST00000403904 IGLV1-50A0A075B6I6 118 aa20.64■□□□□ 0.9
CSNK1E-204ENST00000403904 A4D1N5 150 aa20.64■□□□□ 0.9
CSNK1E-204ENST00000403904 TSTD3H0UI37 97 aa20.64■□□□□ 0.9
CSNK1E-204ENST00000403904 PSORS1C2Q9UIG4 136 aa20.63■□□□□ 0.89
CSNK1E-204ENST00000403904 TRBV10-3A0A0K0K1G6 114 aa20.62■□□□□ 0.89
CSNK1E-204ENST00000403904 FAM229AH3BQW9 127 aa20.61■□□□□ 0.89
CSNK1E-204ENST00000403904 CEND1Q8N111 149 aa20.61■□□□□ 0.89
CSNK1E-204ENST00000403904 S100A7L2Q5SY68 101 aa20.6■□□□□ 0.89
CSNK1E-204ENST00000403904 Q8N1X5 172 aa20.6■□□□□ 0.89
CSNK1E-204ENST00000403904 LINC00337Q8N6G1 96 aa20.6■□□□□ 0.89
CSNK1E-204ENST00000403904 HERC2O95714 4834 aa20.6■□□□□ 0.89
CSNK1E-204ENST00000403904 DDTP30046 118 aa20.59■□□□□ 0.89
CSNK1E-204ENST00000403904 RPL37AP61513 92 aaKnown RBP20.59■□□□□ 0.89
CSNK1E-204ENST00000403904 HSD52Q0P140 79 aa20.59■□□□□ 0.89
CSNK1E-204ENST00000403904 OR13C6PQ8NH95 151 aa20.58■□□□□ 0.88
CSNK1E-204ENST00000403904 Q5VSD8 79 aa20.57■□□□□ 0.88
CSNK1E-204ENST00000403904 IGLV6-57P01721 117 aa20.56■□□□□ 0.88
CSNK1E-204ENST00000403904 C1orf137Q5JT78 98 aa20.54■□□□□ 0.88
CSNK1E-204ENST00000403904 FXYD2P54710 66 aa20.53■□□□□ 0.88
CSNK1E-204ENST00000403904 A6NDN8 102 aa20.51■□□□□ 0.87
CSNK1E-204ENST00000403904 TMEM126AQ9H061 195 aa20.51■□□□□ 0.87
CSNK1E-204ENST00000403904 PLA2G1BP04054 148 aaKnown RBP20.51■□□□□ 0.87
CSNK1E-204ENST00000403904 CTAG1AP78358 180 aa20.51■□□□□ 0.87
CSNK1E-204ENST00000403904 KCNQ1DNQ9H478 68 aa20.51■□□□□ 0.87
CSNK1E-204ENST00000403904 SRRM2Q9UQ35 2752 aaKnown RBP20.51■□□□□ 0.87
CSNK1E-204ENST00000403904 KRTAP10-4P60372 401 aaPredicted RBP20.5■□□□□ 0.87
CSNK1E-204ENST00000403904 REG3GQ6UW15 175 aa20.5■□□□□ 0.87
CSNK1E-204ENST00000403904 TRAV13-2A0A0B4J235 113 aa20.48■□□□□ 0.87
CSNK1E-204ENST00000403904 PRYO14603 147 aa20.47■□□□□ 0.87
CSNK1E-204ENST00000403904 CFC1BP0CG36 223 aa20.47■□□□□ 0.87
CSNK1E-204ENST00000403904 CFC1P0CG37 223 aa20.47■□□□□ 0.87
CSNK1E-204ENST00000403904 TMEM238LA0A1B0GVL6 79 aa20.46■□□□□ 0.87
CSNK1E-204ENST00000403904 A6NJY4 79 aa20.46■□□□□ 0.87
CSNK1E-204ENST00000403904 TRAV23DV6A0A075B6W5 121 aa20.45■□□□□ 0.86
CSNK1E-204ENST00000403904 BCE1O60756 84 aa20.43■□□□□ 0.86
CSNK1E-204ENST00000403904 IGLV7-43P04211 117 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms