RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 DNAH6Q9C0G6 4158 aa3.59□□□□□ -1.84
SAMSN1-203ENST00000400566 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 SMIM13P0DJ93 91 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 CNBPP62633 177 aaKnown RBP3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 SACSQ9NZJ4 4579 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 A0A087WTM6 91 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 PFN2P35080 140 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 LINC00158P58513 81 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 C9orf116Q5BN46 136 aaPredicted RBP3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 CARD19Q96LW7 228 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 HIST1H4GQ99525 98 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 PPDPFQ9H3Y8 114 aa3.58□□□□□ -1.84
SAMSN1-203ENST00000400566 HYDINQ4G0P3 5121 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 A0A0U1RRA0 63 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 B5MCH6 92 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 NDUFC2-KCTD14E9PQ53 114 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 M0R143 59 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 RTL8CO15255 209 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 IFITM1P13164 125 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 CEND1Q8N111 149 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 Q8N814 137 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 DAND5Q8N907 189 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 LINC00308Q8TCZ7 52 aa3.57□□□□□ -1.84
SAMSN1-203ENST00000400566 LOC107984156A0A0G2JMH3 177 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 TLX1NBP0CAT3 122 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 GCSHP23434 173 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 BVES-AS1Q5T3Y7 98 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 ARL17AQ8IVW1 177 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 COPS9Q8WXC6 57 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 KMT2CQ8NEZ4 4911 aaKnown RBP3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 HINT1P49773 126 aaPredicted RBP3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 FXYD2P54710 66 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 RPL24P83731 157 aaKnown RBP3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 SOSTDC1Q6X4U4 206 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 MUSTN1Q8IVN3 82 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 SNHG12Q9BXW3 62 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 SND1-IT1Q9HBX3 110 aa3.56□□□□□ -1.84
SAMSN1-203ENST00000400566 DNAH17Q9UFH2 4485 aa3.55□□□□□ -1.84
SAMSN1-203ENST00000400566 Q6ZRP5 223 aa3.55□□□□□ -1.84
SAMSN1-203ENST00000400566 LOC107984640A0A0U1RRK4 108 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 A0A1B0GWB2 263 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 A4D1N5 150 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 NPC2P61916 151 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 FAM30AQ9NZY2 134 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 PKIGQ9Y2B9 76 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 LINC00336Q6ZUF6 198 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 XAGE1AQ9HD64 81 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 RYR2Q92736 4967 aa3.54□□□□□ -1.84
SAMSN1-203ENST00000400566 A0A0B4J2C4 111 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 A6NDN8 102 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 C16orf90A8MZG2 172 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 NDUFC2O95298 119 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 CFC1BP0CG36 223 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 CFC1P0CG37 223 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 RPL18AQ02543 176 aaKnown RBP3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 BATFQ16520 125 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 GAGE2EQ4V326 116 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 C9orf129Q5T035 196 aaKnown RBP3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 SDIM1Q6ZPB5 146 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 NHP2Q9NX24 153 aaKnown RBP3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 GAGE2DQ9UEU5 116 aa3.53□□□□□ -1.84
SAMSN1-203ENST00000400566 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 Q8NDZ9 215 aa3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 IGKV2-28A0A075B6P5 120 aa3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 A0A096LNI7 61 aa3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 IGLV5-52A0A0A0MRZ9 124 aa3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 IGKV2D-28P01615 120 aa3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 LBHQ53QV2 105 aaPredicted RBP3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 COL5A1-AS1Q5SY13 56 aa3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 Q8N1X5 172 aa3.52□□□□□ -1.85
SAMSN1-203ENST00000400566 TRBV10-2A0A0K0K1G8 114 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 K7ERJ3 54 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 VPREB1P12018 145 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 GAGE2BQ13066 116 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 LINC01620Q4KN68 170 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 LINC00337Q8N6G1 96 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 LINC00474Q9P2X8 69 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 PRO1854Q9UHT4 67 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 FAT2Q9NYQ8 4349 aa3.51□□□□□ -1.85
SAMSN1-203ENST00000400566 IGLV5-37A0A075B6J1 123 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 TRAV13-2A0A0B4J235 113 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 RAB37Q96AX2 223 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 FRAS1Q86XX4 4008 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 IGKV2-24A0A0C4DH68 120 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 TAX1BP3O14907 124 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 FUSP35637 526 aaKnown RBP eCLIP3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 PRR3P79522 188 aaKnown RBP3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 SERTAD4-AS1Q5TG53 156 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 KRTAP7-1Q8IUC3 87 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 SPACA4Q8TDM5 124 aa3.5□□□□□ -1.85
SAMSN1-203ENST00000400566 A0A1B0GVY2 172 aa3.49□□□□□ -1.85
SAMSN1-203ENST00000400566 FAM168BA1KXE4 195 aa3.49□□□□□ -1.85
SAMSN1-203ENST00000400566 M0R378 163 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms