RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 UBE2WQ96B02 151 aa4.52□□□□□ -1.69
CX3CR1-202ENST00000399220 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
CX3CR1-202ENST00000399220 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
CX3CR1-202ENST00000399220 TOMM7Q9P0U1 55 aa4.51□□□□□ -1.69
CX3CR1-202ENST00000399220 STARD9Q9P2P6 4700 aa4.51□□□□□ -1.69
CX3CR1-202ENST00000399220 IGLV10-54A0A075B6I4 117 aa4.51□□□□□ -1.69
CX3CR1-202ENST00000399220 C9JAW5 83 aa4.51□□□□□ -1.69
CX3CR1-202ENST00000399220 COL7A1Q02388 2944 aa4.51□□□□□ -1.69
CX3CR1-202ENST00000399220 C6orf48Q9UBA6 75 aa4.51□□□□□ -1.69
CX3CR1-202ENST00000399220 LINC00167Q96N53 147 aa4.5□□□□□ -1.69
CX3CR1-202ENST00000399220 SND1-IT1Q9HBX3 110 aa4.5□□□□□ -1.69
CX3CR1-202ENST00000399220 CSMD3Q7Z407 3707 aa4.5□□□□□ -1.69
CX3CR1-202ENST00000399220 LINC00158P58513 81 aa4.5□□□□□ -1.69
CX3CR1-202ENST00000399220 DAND5Q8N907 189 aa4.5□□□□□ -1.69
CX3CR1-202ENST00000399220 C10orf25Q5T742 122 aa4.5□□□□□ -1.69
CX3CR1-202ENST00000399220 IGLV5-37A0A075B6J1 123 aa4.49□□□□□ -1.69
CX3CR1-202ENST00000399220 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
CX3CR1-202ENST00000399220 UNQ6190/PRO20217Q6UXQ8 127 aa4.49□□□□□ -1.69
CX3CR1-202ENST00000399220 LINC00337Q8N6G1 96 aa4.49□□□□□ -1.69
CX3CR1-202ENST00000399220 A0A1B0GX51 115 aa4.49□□□□□ -1.69
CX3CR1-202ENST00000399220 NDUFV3P56181 108 aaKnown RBP4.49□□□□□ -1.69
CX3CR1-202ENST00000399220 TTC32Q5I0X7 151 aa4.49□□□□□ -1.69
CX3CR1-202ENST00000399220 NBEAL1Q6ZS30 2694 aa4.48□□□□□ -1.69
CX3CR1-202ENST00000399220 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
CX3CR1-202ENST00000399220 COX6CP09669 75 aa4.48□□□□□ -1.69
CX3CR1-202ENST00000399220 CNBPP62633 177 aaKnown RBP4.48□□□□□ -1.69
CX3CR1-202ENST00000399220 C6orf223Q8N319 242 aa4.48□□□□□ -1.69
CX3CR1-202ENST00000399220 ZNF561-AS1K7EIQ3 104 aa4.48□□□□□ -1.69
CX3CR1-202ENST00000399220 IGLV6-57P01721 117 aa4.48□□□□□ -1.69
CX3CR1-202ENST00000399220 TRBV7-6A0A0J9YX20 115 aa4.47□□□□□ -1.69
CX3CR1-202ENST00000399220 H0YGX0 51 aa4.47□□□□□ -1.69
CX3CR1-202ENST00000399220 TEX49A0A1B0GTD5 131 aa4.47□□□□□ -1.69
CX3CR1-202ENST00000399220 Q6ZRN7 208 aaPredicted RBP4.47□□□□□ -1.69
CX3CR1-202ENST00000399220 Q6ZRU5 148 aa4.47□□□□□ -1.69
CX3CR1-202ENST00000399220 KRTAP1-5Q9BYS1 174 aa4.47□□□□□ -1.69
CX3CR1-202ENST00000399220 DNAH2Q9P225 4427 aa4.47□□□□□ -1.69
CX3CR1-202ENST00000399220 IGKV2D-24A0A075B6R9 120 aa4.46□□□□□ -1.69
CX3CR1-202ENST00000399220 J3QL48 77 aa4.46□□□□□ -1.69
CX3CR1-202ENST00000399220 PFN2P35080 140 aa4.46□□□□□ -1.69
CX3CR1-202ENST00000399220 SYCNQ0VAF6 134 aa4.46□□□□□ -1.69
CX3CR1-202ENST00000399220 CAMK2N2Q96S95 79 aa4.46□□□□□ -1.69
CX3CR1-202ENST00000399220 TMEM126AQ9H061 195 aa4.46□□□□□ -1.69
CX3CR1-202ENST00000399220 NPC2P61916 151 aa4.46□□□□□ -1.7
CX3CR1-202ENST00000399220 DNAH10Q8IVF4 4471 aa4.46□□□□□ -1.7
CX3CR1-202ENST00000399220 USP17L23D6RBM5 183 aa4.46□□□□□ -1.7
CX3CR1-202ENST00000399220 C14orf177Q52M58 125 aa4.46□□□□□ -1.7
CX3CR1-202ENST00000399220 Q8NDZ9 215 aa4.46□□□□□ -1.7
CX3CR1-202ENST00000399220 NBDYA0A0U1RRE5 68 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 VPREB1P12018 145 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 GAGE2BQ13066 116 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 GAGE2EQ4V326 116 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 GAGE2DQ9UEU5 116 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 PKIGQ9Y2B9 76 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 EPM2AB3EWF7 344 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 SNCGO76070 127 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 SLPIP03973 132 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 C9orf116Q5BN46 136 aaPredicted RBP4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 Q6ZR54 194 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 SMIM11BQ8TCY0 68 aa4.45□□□□□ -1.7
CX3CR1-202ENST00000399220 LYSTQ99698 3801 aa4.44□□□□□ -1.7
CX3CR1-202ENST00000399220 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
CX3CR1-202ENST00000399220 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
CX3CR1-202ENST00000399220 LINC00643Q86TS7 51 aa4.44□□□□□ -1.7
CX3CR1-202ENST00000399220 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
CX3CR1-202ENST00000399220 ANAPC13Q9BS18 74 aa4.44□□□□□ -1.7
CX3CR1-202ENST00000399220 Q1RN00 199 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 M0R378 163 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 HIGD2BQ4VC39 106 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 Q6ZRP5 223 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 CLEC2BQ92478 149 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 H3BQ85 93 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 C9orf129Q5T035 196 aaKnown RBP4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 CASC10Q5T4H9 136 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 MEGF8Q7Z7M0 2845 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
CX3CR1-202ENST00000399220 INAFM2P0DMQ5 153 aa4.42□□□□□ -1.7
CX3CR1-202ENST00000399220 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
CX3CR1-202ENST00000399220 LOC107984640A0A0U1RRK4 108 aa4.42□□□□□ -1.7
CX3CR1-202ENST00000399220 FAM218AQ96MZ4 157 aa4.41□□□□□ -1.7
CX3CR1-202ENST00000399220 Q9HAA7 133 aa4.41□□□□□ -1.7
CX3CR1-202ENST00000399220 LINC00526Q96FQ7 95 aa4.41□□□□□ -1.7
CX3CR1-202ENST00000399220 KCNQ1DNQ9H478 68 aa4.41□□□□□ -1.7
CX3CR1-202ENST00000399220 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
CX3CR1-202ENST00000399220 SPRR1AP35321 89 aa4.41□□□□□ -1.7
CX3CR1-202ENST00000399220 WWC2-AS2Q96NR7 200 aa4.41□□□□□ -1.7
CX3CR1-202ENST00000399220 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.7
CX3CR1-202ENST00000399220 Q6JHZ5 121 aa4.4□□□□□ -1.7
CX3CR1-202ENST00000399220 C16orf90A8MZG2 172 aa4.4□□□□□ -1.71
CX3CR1-202ENST00000399220 C3orf84H3BNL1 204 aa4.4□□□□□ -1.71
CX3CR1-202ENST00000399220 H7C2G1 150 aa4.4□□□□□ -1.71
CX3CR1-202ENST00000399220 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
CX3CR1-202ENST00000399220 MGAM2Q2M2H8 2515 aa4.39□□□□□ -1.71
CX3CR1-202ENST00000399220 ELOF1P60002 83 aaKnown RBP4.39□□□□□ -1.71
CX3CR1-202ENST00000399220 LINC00575Q6W349 94 aa4.39□□□□□ -1.71
CX3CR1-202ENST00000399220 C9orf163Q8N9P6 203 aa4.39□□□□□ -1.71
CX3CR1-202ENST00000399220 TRAV23DV6A0A075B6W5 121 aa4.39□□□□□ -1.71
CX3CR1-202ENST00000399220 KRTAP4-16G5E9R7 235 aaPredicted RBP4.39□□□□□ -1.71
CX3CR1-202ENST00000399220 BCE1O60756 84 aa4.39□□□□□ -1.71
CX3CR1-202ENST00000399220 CCDC179H3BU77 68 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms