RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RTL8CO15255 209 aa12.59□□□□□ -0.39
PDLIM2-205ENST00000397761 NDUFC2O95298 119 aa12.59□□□□□ -0.39
PDLIM2-205ENST00000397761 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-205ENST00000397761 IGKV2-28A0A075B6P5 120 aa12.56□□□□□ -0.4
PDLIM2-205ENST00000397761 LOC107984640A0A0U1RRK4 108 aa12.56□□□□□ -0.4
PDLIM2-205ENST00000397761 IGKV2D-28P01615 120 aa12.56□□□□□ -0.4
PDLIM2-205ENST00000397761 C9orf163Q8N9P6 203 aa12.56□□□□□ -0.4
PDLIM2-205ENST00000397761 PRO1854Q9UHT4 67 aa12.56□□□□□ -0.4
PDLIM2-205ENST00000397761 Q8NDZ9 215 aa12.55□□□□□ -0.4
PDLIM2-205ENST00000397761 XAGE1AQ9HD64 81 aa12.55□□□□□ -0.4
PDLIM2-205ENST00000397761 HECTD4Q9Y4D8 3996 aa12.54□□□□□ -0.4
PDLIM2-205ENST00000397761 RAB37Q96AX2 223 aa12.54□□□□□ -0.4
PDLIM2-205ENST00000397761 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
PDLIM2-205ENST00000397761 RPL18AQ02543 176 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-205ENST00000397761 TNP2Q05952 138 aa12.53□□□□□ -0.4
PDLIM2-205ENST00000397761 GAGE2EQ4V326 116 aa12.53□□□□□ -0.4
PDLIM2-205ENST00000397761 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-205ENST00000397761 GAGE2DQ9UEU5 116 aa12.53□□□□□ -0.4
PDLIM2-205ENST00000397761 EPPK1P58107 5090 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-205ENST00000397761 LINC00337Q8N6G1 96 aa12.52□□□□□ -0.41
PDLIM2-205ENST00000397761 C9orf118A6NHY6 69 aa12.51□□□□□ -0.41
PDLIM2-205ENST00000397761 PLA2G2DQ9UNK4 145 aa12.51□□□□□ -0.41
PDLIM2-205ENST00000397761 PKIGQ9Y2B9 76 aa12.51□□□□□ -0.41
PDLIM2-205ENST00000397761 TRAV13-2A0A0B4J235 113 aa12.5□□□□□ -0.41
PDLIM2-205ENST00000397761 C16orf90A8MZG2 172 aa12.49□□□□□ -0.41
PDLIM2-205ENST00000397761 VPREB1P12018 145 aa12.49□□□□□ -0.41
PDLIM2-205ENST00000397761 PGPEP1Q9NXJ5 209 aa12.49□□□□□ -0.41
PDLIM2-205ENST00000397761 TRBV10-2A0A0K0K1G8 114 aa12.48□□□□□ -0.41
PDLIM2-205ENST00000397761 TSPAN13O95857 204 aa12.48□□□□□ -0.41
PDLIM2-205ENST00000397761 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
PDLIM2-205ENST00000397761 A0A096LNI7 61 aa12.47□□□□□ -0.41
PDLIM2-205ENST00000397761 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
PDLIM2-205ENST00000397761 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
PDLIM2-205ENST00000397761 GAGE2BQ13066 116 aa12.47□□□□□ -0.41
PDLIM2-205ENST00000397761 IGLV5-37A0A075B6J1 123 aa12.45□□□□□ -0.42
PDLIM2-205ENST00000397761 H3BUT2 72 aa12.44□□□□□ -0.42
PDLIM2-205ENST00000397761 NCR3O14931 201 aa12.43□□□□□ -0.42
PDLIM2-205ENST00000397761 SERTAD4-AS1Q5TG53 156 aa12.43□□□□□ -0.42
PDLIM2-205ENST00000397761 KRTAP7-1Q8IUC3 87 aa12.43□□□□□ -0.42
PDLIM2-205ENST00000397761 NAA38Q9BRA0 125 aaKnown RBP12.43□□□□□ -0.42
PDLIM2-205ENST00000397761 BIRC6Q9NR09 4857 aa12.43□□□□□ -0.42
PDLIM2-205ENST00000397761 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
PDLIM2-205ENST00000397761 TMEM126AQ9H061 195 aa12.42□□□□□ -0.42
PDLIM2-205ENST00000397761 H7C2G1 150 aa12.41□□□□□ -0.42
PDLIM2-205ENST00000397761 IGLV6-57P01721 117 aa12.41□□□□□ -0.42
PDLIM2-205ENST00000397761 IGLV5-52A0A0A0MRZ9 124 aa12.4□□□□□ -0.42
PDLIM2-205ENST00000397761 A0A1B0GV90 55 aa12.4□□□□□ -0.42
PDLIM2-205ENST00000397761 A0A1W2PPM0 123 aa12.4□□□□□ -0.42
PDLIM2-205ENST00000397761 FAM168BA1KXE4 195 aa12.4□□□□□ -0.42
PDLIM2-205ENST00000397761 M0R378 163 aa12.4□□□□□ -0.42
PDLIM2-205ENST00000397761 Q1RN00 199 aa12.4□□□□□ -0.43
PDLIM2-205ENST00000397761 LINC00336Q6ZUF6 198 aa12.4□□□□□ -0.43
PDLIM2-205ENST00000397761 LINC00474Q9P2X8 69 aa12.4□□□□□ -0.43
PDLIM2-205ENST00000397761 FAT2Q9NYQ8 4349 aa12.39□□□□□ -0.43
PDLIM2-205ENST00000397761 IGKV2-24A0A0C4DH68 120 aa12.39□□□□□ -0.43
PDLIM2-205ENST00000397761 RPL28P46779 137 aaKnown RBP12.39□□□□□ -0.43
PDLIM2-205ENST00000397761 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
PDLIM2-205ENST00000397761 DNAH11Q96DT5 4516 aa12.38□□□□□ -0.43
PDLIM2-205ENST00000397761 CHTF8P0CG12 524 aa12.38□□□□□ -0.43
PDLIM2-205ENST00000397761 FUSP35637 526 aaKnown RBP eCLIP12.38□□□□□ -0.43
PDLIM2-205ENST00000397761 KRTAP10-2P60368 255 aa12.38□□□□□ -0.43
PDLIM2-205ENST00000397761 PKD1P98161 4303 aa12.37□□□□□ -0.43
PDLIM2-205ENST00000397761 TRIAP1O43715 76 aa12.37□□□□□ -0.43
PDLIM2-205ENST00000397761 S100A7L2Q5SY68 101 aa12.37□□□□□ -0.43
PDLIM2-205ENST00000397761 NKAPP1Q8N9T2 125 aa12.37□□□□□ -0.43
PDLIM2-205ENST00000397761 SMIM11BQ8TCY0 68 aa12.37□□□□□ -0.43
PDLIM2-205ENST00000397761 TRBV10-3A0A0K0K1G6 114 aa12.35□□□□□ -0.43
PDLIM2-205ENST00000397761 EPM2AB3EWF7 344 aa12.35□□□□□ -0.43
PDLIM2-205ENST00000397761 FABP2P12104 132 aa12.35□□□□□ -0.43
PDLIM2-205ENST00000397761 SPACA4Q8TDM5 124 aa12.35□□□□□ -0.43
PDLIM2-205ENST00000397761 C7orf33Q8WU49 177 aa12.35□□□□□ -0.43
PDLIM2-205ENST00000397761 A0A1W2PNN7 141 aa12.34□□□□□ -0.43
PDLIM2-205ENST00000397761 PANO1I0J062 215 aa12.34□□□□□ -0.43
PDLIM2-205ENST00000397761 FAM19A5Q7Z5A7 132 aaPredicted RBP12.34□□□□□ -0.43
PDLIM2-205ENST00000397761 C22orf24Q9Y442 160 aa12.34□□□□□ -0.43
PDLIM2-205ENST00000397761 PSMB2P49721 201 aa12.34□□□□□ -0.43
PDLIM2-205ENST00000397761 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.34□□□□□ -0.43
PDLIM2-205ENST00000397761 LYRM7Q5U5X0 104 aa12.32□□□□□ -0.44
PDLIM2-205ENST00000397761 VAMP3Q15836 100 aa12.31□□□□□ -0.44
PDLIM2-205ENST00000397761 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-205ENST00000397761 COX6CP09669 75 aa12.3□□□□□ -0.44
PDLIM2-205ENST00000397761 LINC00167Q96N53 147 aa12.3□□□□□ -0.44
PDLIM2-205ENST00000397761 CBY1Q9Y3M2 126 aa12.3□□□□□ -0.44
PDLIM2-205ENST00000397761 M0QXV9 152 aa12.29□□□□□ -0.44
PDLIM2-205ENST00000397761 KCNQ1DNQ9H478 68 aa12.29□□□□□ -0.44
PDLIM2-205ENST00000397761 SPCS1Q9Y6A9 102 aa12.29□□□□□ -0.44
PDLIM2-205ENST00000397761 IGLV1-50A0A075B6I6 118 aa12.28□□□□□ -0.44
PDLIM2-205ENST00000397761 TRAV23DV6A0A075B6W5 121 aa12.28□□□□□ -0.44
PDLIM2-205ENST00000397761 K7EP34 96 aa12.28□□□□□ -0.44
PDLIM2-205ENST00000397761 SCGB1C2P0DMR2 95 aa12.28□□□□□ -0.44
PDLIM2-205ENST00000397761 GAGE10A6NGK3 116 aa12.27□□□□□ -0.44
PDLIM2-205ENST00000397761 DNAH5Q8TE73 4624 aa12.27□□□□□ -0.44
PDLIM2-205ENST00000397761 TRBV20-1A0A075B6N2 111 aa12.27□□□□□ -0.45
PDLIM2-205ENST00000397761 A0A1B0GVY2 172 aa12.27□□□□□ -0.45
PDLIM2-205ENST00000397761 TCL1BO95988 128 aa12.26□□□□□ -0.45
PDLIM2-205ENST00000397761 C6orf99Q4VX62 202 aa12.26□□□□□ -0.45
PDLIM2-205ENST00000397761 A0A087WYN8 130 aa12.25□□□□□ -0.45
PDLIM2-205ENST00000397761 H0YGX0 51 aa12.25□□□□□ -0.45
PDLIM2-205ENST00000397761 ZNF73O43830 326 aaPredicted RBP12.25□□□□□ -0.45
PDLIM2-205ENST00000397761 PLAC8Q9NZF1 115 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms