RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 OXLD1Q5BKU9 147 aa7.65□□□□□ -1.18
CCDC40-204ENST00000397545 LINC00337Q8N6G1 96 aa7.65□□□□□ -1.18
CCDC40-204ENST00000397545 LELP1Q5T871 98 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 PRO0461Q9UI25 63 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 CELA1Q9UNI1 258 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 FHL2Q14192 279 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 ZNF575Q86XF7 245 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 ITPR2Q14571 2701 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 TRBV10-3A0A0K0K1G6 114 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 NDUFC2O95298 119 aa7.64□□□□□ -1.19
CCDC40-204ENST00000397545 A0A0J9YWU9 116 aa7.63□□□□□ -1.19
CCDC40-204ENST00000397545 BEAN1Q3B7T3 259 aa7.63□□□□□ -1.19
CCDC40-204ENST00000397545 Q6JHZ5 121 aa7.63□□□□□ -1.19
CCDC40-204ENST00000397545 C6orf223Q8N319 242 aa7.63□□□□□ -1.19
CCDC40-204ENST00000397545 UBR5O95071 2799 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-204ENST00000397545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.63□□□□□ -1.19
CCDC40-204ENST00000397545 Q8N814 137 aa7.63□□□□□ -1.19
CCDC40-204ENST00000397545 LINC00846Q9NV44 126 aa7.63□□□□□ -1.19
CCDC40-204ENST00000397545 IGLV1-51P01701 117 aa7.62□□□□□ -1.19
CCDC40-204ENST00000397545 SPTSSBQ8NFR3 76 aa7.62□□□□□ -1.19
CCDC40-204ENST00000397545 M0R378 163 aa7.62□□□□□ -1.19
CCDC40-204ENST00000397545 HILS1P60008 231 aa7.62□□□□□ -1.19
CCDC40-204ENST00000397545 FAM19A3Q7Z5A8 133 aa7.62□□□□□ -1.19
CCDC40-204ENST00000397545 M0QXV9 152 aa7.61□□□□□ -1.19
CCDC40-204ENST00000397545 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
CCDC40-204ENST00000397545 IGKV4-1P06312 121 aa7.61□□□□□ -1.19
CCDC40-204ENST00000397545 CSDC2Q9Y534 153 aaKnown RBP7.61□□□□□ -1.19
CCDC40-204ENST00000397545 HRCT1Q6UXD1 115 aa7.61□□□□□ -1.19
CCDC40-204ENST00000397545 CHKB-CPT1BH3BT56 60 aa7.61□□□□□ -1.19
CCDC40-204ENST00000397545 RETNQ9HD89 108 aa7.61□□□□□ -1.19
CCDC40-204ENST00000397545 LRCOL1A6NCL2 159 aa7.6□□□□□ -1.19
CCDC40-204ENST00000397545 BRI3O95415 125 aa7.6□□□□□ -1.19
CCDC40-204ENST00000397545 IGHV4-30-4P0DP06 118 aa7.6□□□□□ -1.19
CCDC40-204ENST00000397545 LINC01546A6NGU7 62 aa7.6□□□□□ -1.19
CCDC40-204ENST00000397545 KLK9Q2XQG4 91 aa7.6□□□□□ -1.19
CCDC40-204ENST00000397545 LOC107984640A0A0U1RRK4 108 aa7.59□□□□□ -1.19
CCDC40-204ENST00000397545 NANOS2P60321 138 aaKnown RBP7.59□□□□□ -1.19
CCDC40-204ENST00000397545 C11orf72Q8NBR9 251 aa7.59□□□□□ -1.19
CCDC40-204ENST00000397545 COX17Q14061 63 aa7.58□□□□□ -1.2
CCDC40-204ENST00000397545 NDUFC2-KCTD14E9PQ53 114 aa7.58□□□□□ -1.2
CCDC40-204ENST00000397545 SOSTDC1Q6X4U4 206 aa7.58□□□□□ -1.2
CCDC40-204ENST00000397545 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
CCDC40-204ENST00000397545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.57□□□□□ -1.2
CCDC40-204ENST00000397545 Q8N3U1 123 aa7.57□□□□□ -1.2
CCDC40-204ENST00000397545 B9D2Q9BPU9 175 aa7.57□□□□□ -1.2
CCDC40-204ENST00000397545 FAM19A4Q96LR4 140 aa7.57□□□□□ -1.2
CCDC40-204ENST00000397545 KIR2DL5BQ8NHK3 375 aa7.57□□□□□ -1.2
CCDC40-204ENST00000397545 IGLV5-39A0A0G2JS06 123 aa7.56□□□□□ -1.2
CCDC40-204ENST00000397545 FBN2P35556 2912 aa7.56□□□□□ -1.2
CCDC40-204ENST00000397545 FAM218AQ96MZ4 157 aa7.55□□□□□ -1.2
CCDC40-204ENST00000397545 IGHV3OR16-9A0A0B4J2B5 98 aa7.55□□□□□ -1.2
CCDC40-204ENST00000397545 SPINK6Q6UWN8 80 aa7.55□□□□□ -1.2
CCDC40-204ENST00000397545 Q6ZTC4 211 aa7.54□□□□□ -1.2
CCDC40-204ENST00000397545 TRAV7A0A075B6U4 112 aa7.53□□□□□ -1.2
CCDC40-204ENST00000397545 M0R2N4 97 aa7.53□□□□□ -1.2
CCDC40-204ENST00000397545 Q8N9L7 120 aa7.53□□□□□ -1.2
CCDC40-204ENST00000397545 EGFEM1PQ0D2K5 195 aa7.52□□□□□ -1.2
CCDC40-204ENST00000397545 MXRA5Q9NR99 2828 aa7.52□□□□□ -1.21
CCDC40-204ENST00000397545 CUBNO60494 3623 aa7.52□□□□□ -1.21
CCDC40-204ENST00000397545 A0A096LNT2 108 aa7.52□□□□□ -1.21
CCDC40-204ENST00000397545 DHRS4-AS1Q9P1J3 65 aa7.52□□□□□ -1.21
CCDC40-204ENST00000397545 TRAV10A0A0B4J240 114 aa7.52□□□□□ -1.21
CCDC40-204ENST00000397545 NDUFC1O43677 76 aa7.52□□□□□ -1.21
CCDC40-204ENST00000397545 LINC00575Q6W349 94 aa7.51□□□□□ -1.21
CCDC40-204ENST00000397545 Q6ZVQ6 151 aa7.51□□□□□ -1.21
CCDC40-204ENST00000397545 A0A1B0GUV1 79 aa7.51□□□□□ -1.21
CCDC40-204ENST00000397545 C1orf137Q5JT78 98 aa7.51□□□□□ -1.21
CCDC40-204ENST00000397545 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-204ENST00000397545 DEFB116Q30KQ4 102 aa7.51□□□□□ -1.21
CCDC40-204ENST00000397545 TRBV7-7A0A0K0K1E9 115 aa7.5□□□□□ -1.21
CCDC40-204ENST00000397545 C14orf177Q52M58 125 aa7.5□□□□□ -1.21
CCDC40-204ENST00000397545 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
CCDC40-204ENST00000397545 SHISA2Q6UWI4 295 aa7.49□□□□□ -1.21
CCDC40-204ENST00000397545 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
CCDC40-204ENST00000397545 IGLV9-49A0A0B4J1Y8 123 aa7.48□□□□□ -1.21
CCDC40-204ENST00000397545 Q6ZRU5 148 aa7.48□□□□□ -1.21
CCDC40-204ENST00000397545 MUC7Q8TAX7 377 aa7.48□□□□□ -1.21
CCDC40-204ENST00000397545 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
CCDC40-204ENST00000397545 SBSPONQ8IVN8 264 aa7.48□□□□□ -1.21
CCDC40-204ENST00000397545 LINC01547P58512 204 aaPredicted RBP7.47□□□□□ -1.21
CCDC40-204ENST00000397545 NF1P21359 2839 aa7.47□□□□□ -1.21
CCDC40-204ENST00000397545 IGLV5-45A0A087WSX0 123 aa7.47□□□□□ -1.21
CCDC40-204ENST00000397545 C10orf25Q5T742 122 aa7.47□□□□□ -1.21
CCDC40-204ENST00000397545 FHL3Q13643 280 aa7.46□□□□□ -1.21
CCDC40-204ENST00000397545 LYPD5Q6UWN5 251 aa7.46□□□□□ -1.21
CCDC40-204ENST00000397545 APCP25054 2843 aa7.46□□□□□ -1.22
CCDC40-204ENST00000397545 LITAFQ99732 161 aa7.46□□□□□ -1.22
CCDC40-204ENST00000397545 CR1P17927 2039 aa7.45□□□□□ -1.22
CCDC40-204ENST00000397545 A0A087WSZ3 146 aa7.44□□□□□ -1.22
CCDC40-204ENST00000397545 FSHBP01225 129 aa7.44□□□□□ -1.22
CCDC40-204ENST00000397545 SERP1Q9Y6X1 66 aa7.44□□□□□ -1.22
CCDC40-204ENST00000397545 PLAC8L1A1L4L8 177 aa7.44□□□□□ -1.22
CCDC40-204ENST00000397545 ATP5EP56381 51 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-204ENST00000397545 TMEM254Q8TBM7 123 aa7.44□□□□□ -1.22
CCDC40-204ENST00000397545 A6NED7 52 aa7.43□□□□□ -1.22
CCDC40-204ENST00000397545 PRYO14603 147 aa7.42□□□□□ -1.22
CCDC40-204ENST00000397545 NSD1Q96L73 2696 aaPredicted RBP7.42□□□□□ -1.22
CCDC40-204ENST00000397545 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
CCDC40-204ENST00000397545 PSPHP1O15172 72 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 246.7 ms