RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 Q6ZRP5 223 aa12.34□□□□□ -0.43
TSPAN4-204ENST00000397404 CBY1Q9Y3M2 126 aa12.34□□□□□ -0.43
TSPAN4-204ENST00000397404 C16orf90A8MZG2 172 aa12.32□□□□□ -0.44
TSPAN4-204ENST00000397404 RPL18AQ02543 176 aaKnown RBP12.32□□□□□ -0.44
TSPAN4-204ENST00000397404 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.3□□□□□ -0.44
TSPAN4-204ENST00000397404 TAX1BP3O14907 124 aa12.3□□□□□ -0.44
TSPAN4-204ENST00000397404 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
TSPAN4-204ENST00000397404 GAGE2EQ4V326 116 aa12.29□□□□□ -0.44
TSPAN4-204ENST00000397404 LYRM7Q5U5X0 104 aa12.29□□□□□ -0.44
TSPAN4-204ENST00000397404 LINC00336Q6ZUF6 198 aa12.29□□□□□ -0.44
TSPAN4-204ENST00000397404 GAGE2DQ9UEU5 116 aa12.29□□□□□ -0.44
TSPAN4-204ENST00000397404 C9orf118A6NHY6 69 aa12.28□□□□□ -0.44
TSPAN4-204ENST00000397404 TMEM126AQ9H061 195 aa12.28□□□□□ -0.44
TSPAN4-204ENST00000397404 RTL8CO15255 209 aa12.27□□□□□ -0.44
TSPAN4-204ENST00000397404 K7ERJ3 54 aa12.27□□□□□ -0.45
TSPAN4-204ENST00000397404 XAGE1AQ9HD64 81 aa12.27□□□□□ -0.45
TSPAN4-204ENST00000397404 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.45
TSPAN4-204ENST00000397404 IGKV2-28A0A075B6P5 120 aa12.26□□□□□ -0.45
TSPAN4-204ENST00000397404 IGKV2D-28P01615 120 aa12.26□□□□□ -0.45
TSPAN4-204ENST00000397404 DNAH17Q9UFH2 4485 aa12.25□□□□□ -0.45
TSPAN4-204ENST00000397404 IGLV5-37A0A075B6J1 123 aa12.25□□□□□ -0.45
TSPAN4-204ENST00000397404 SACSQ9NZJ4 4579 aa12.24□□□□□ -0.45
TSPAN4-204ENST00000397404 M0R378 163 aa12.24□□□□□ -0.45
TSPAN4-204ENST00000397404 VPREB1P12018 145 aa12.24□□□□□ -0.45
TSPAN4-204ENST00000397404 RPL13AP40429 203 aaKnown RBP12.24□□□□□ -0.45
TSPAN4-204ENST00000397404 GAGE2BQ13066 116 aa12.24□□□□□ -0.45
TSPAN4-204ENST00000397404 C9orf129Q5T035 196 aaKnown RBP12.24□□□□□ -0.45
TSPAN4-204ENST00000397404 COX6CP09669 75 aa12.23□□□□□ -0.45
TSPAN4-204ENST00000397404 Q1RN00 199 aa12.23□□□□□ -0.45
TSPAN4-204ENST00000397404 LINC00337Q8N6G1 96 aa12.23□□□□□ -0.45
TSPAN4-204ENST00000397404 FRAS1Q86XX4 4008 aa12.23□□□□□ -0.45
TSPAN4-204ENST00000397404 IGLV5-52A0A0A0MRZ9 124 aa12.22□□□□□ -0.45
TSPAN4-204ENST00000397404 TSPAN13O95857 204 aa12.22□□□□□ -0.45
TSPAN4-204ENST00000397404 TNP2Q05952 138 aa12.22□□□□□ -0.45
TSPAN4-204ENST00000397404 S100A7L2Q5SY68 101 aa12.22□□□□□ -0.45
TSPAN4-204ENST00000397404 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
TSPAN4-204ENST00000397404 NKAPP1Q8N9T2 125 aa12.22□□□□□ -0.45
TSPAN4-204ENST00000397404 FABP2P12104 132 aa12.21□□□□□ -0.46
TSPAN4-204ENST00000397404 OR13C6PQ8NH95 151 aa12.21□□□□□ -0.46
TSPAN4-204ENST00000397404 HECTD4Q9Y4D8 3996 aa12.2□□□□□ -0.46
TSPAN4-204ENST00000397404 H3BUT2 72 aa12.2□□□□□ -0.46
TSPAN4-204ENST00000397404 RPL28P46779 137 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-204ENST00000397404 A0A096LNI7 61 aa12.19□□□□□ -0.46
TSPAN4-204ENST00000397404 A0A1W2PPM0 123 aa12.19□□□□□ -0.46
TSPAN4-204ENST00000397404 IGLV6-57P01721 117 aa12.19□□□□□ -0.46
TSPAN4-204ENST00000397404 PSMB2P49721 201 aa12.18□□□□□ -0.46
TSPAN4-204ENST00000397404 TRBV20-1A0A075B6N2 111 aa12.16□□□□□ -0.46
TSPAN4-204ENST00000397404 NCR3O14931 201 aa12.16□□□□□ -0.46
TSPAN4-204ENST00000397404 H7C2G1 150 aa12.14□□□□□ -0.47
TSPAN4-204ENST00000397404 Q8NDZ9 215 aa12.14□□□□□ -0.47
TSPAN4-204ENST00000397404 IGKV2-24A0A0C4DH68 120 aa12.14□□□□□ -0.47
TSPAN4-204ENST00000397404 H0YGX0 51 aa12.14□□□□□ -0.47
TSPAN4-204ENST00000397404 SCGB1C2P0DMR2 95 aa12.14□□□□□ -0.47
TSPAN4-204ENST00000397404 PRR3P79522 188 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-204ENST00000397404 VAMP3Q15836 100 aa12.14□□□□□ -0.47
TSPAN4-204ENST00000397404 GTF2H5Q6ZYL4 71 aa12.14□□□□□ -0.47
TSPAN4-204ENST00000397404 HYDINQ4G0P3 5121 aa12.13□□□□□ -0.47
TSPAN4-204ENST00000397404 MRPL55Q7Z7F7 128 aaKnown RBP12.13□□□□□ -0.47
TSPAN4-204ENST00000397404 TRBV7-6A0A0J9YX20 115 aa12.12□□□□□ -0.47
TSPAN4-204ENST00000397404 SERTAD4-AS1Q5TG53 156 aa12.12□□□□□ -0.47
TSPAN4-204ENST00000397404 SMIM11BQ8TCY0 68 aa12.12□□□□□ -0.47
TSPAN4-204ENST00000397404 SPACA4Q8TDM5 124 aa12.12□□□□□ -0.47
TSPAN4-204ENST00000397404 C22orf24Q9Y442 160 aa12.12□□□□□ -0.47
TSPAN4-204ENST00000397404 EPM2AB3EWF7 344 aa12.11□□□□□ -0.47
TSPAN4-204ENST00000397404 TRIAP1O43715 76 aa12.11□□□□□ -0.47
TSPAN4-204ENST00000397404 TRAV23DV6A0A075B6W5 121 aa12.1□□□□□ -0.47
TSPAN4-204ENST00000397404 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
TSPAN4-204ENST00000397404 FAT2Q9NYQ8 4349 aa12.1□□□□□ -0.47
TSPAN4-204ENST00000397404 SNCGO76070 127 aa12.09□□□□□ -0.47
TSPAN4-204ENST00000397404 KCNQ1DNQ9H478 68 aa12.09□□□□□ -0.47
TSPAN4-204ENST00000397404 GAGE10A6NGK3 116 aa12.08□□□□□ -0.47
TSPAN4-204ENST00000397404 M0QXV9 152 aa12.08□□□□□ -0.47
TSPAN4-204ENST00000397404 PRYO14603 147 aa12.08□□□□□ -0.47
TSPAN4-204ENST00000397404 FAM19A5Q7Z5A7 132 aaPredicted RBP12.08□□□□□ -0.47
TSPAN4-204ENST00000397404 C7orf33Q8WU49 177 aa12.08□□□□□ -0.47
TSPAN4-204ENST00000397404 SPCS1Q9Y6A9 102 aa12.08□□□□□ -0.47
TSPAN4-204ENST00000397404 A0A1B0GV90 55 aa12.08□□□□□ -0.48
TSPAN4-204ENST00000397404 A0A1B0GX51 115 aa12.08□□□□□ -0.48
TSPAN4-204ENST00000397404 IGLV1-50A0A075B6I6 118 aa12.07□□□□□ -0.48
TSPAN4-204ENST00000397404 FAM168BA1KXE4 195 aa12.07□□□□□ -0.48
TSPAN4-204ENST00000397404 K7EP34 96 aa12.07□□□□□ -0.48
TSPAN4-204ENST00000397404 ATXN8Q156A1 80 aa12.07□□□□□ -0.48
TSPAN4-204ENST00000397404 DIRC1Q969H9 104 aa12.07□□□□□ -0.48
TSPAN4-204ENST00000397404 ZNF73O43830 326 aaPredicted RBP12.06□□□□□ -0.48
TSPAN4-204ENST00000397404 DPH3Q96FX2 82 aa12.06□□□□□ -0.48
TSPAN4-204ENST00000397404 NAA38Q9BRA0 125 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-204ENST00000397404 A0A1W2PNN7 141 aa12.05□□□□□ -0.48
TSPAN4-204ENST00000397404 KRTAP10-2P60368 255 aa12.05□□□□□ -0.48
TSPAN4-204ENST00000397404 LINC00167Q96N53 147 aa12.05□□□□□ -0.48
TSPAN4-204ENST00000397404 DNAH11Q96DT5 4516 aa12.04□□□□□ -0.48
TSPAN4-204ENST00000397404 KRTAP7-1Q8IUC3 87 aa12.04□□□□□ -0.48
TSPAN4-204ENST00000397404 PLAC8Q9NZF1 115 aa12.04□□□□□ -0.48
TSPAN4-204ENST00000397404 CHTF8P0CG12 524 aa12.03□□□□□ -0.48
TSPAN4-204ENST00000397404 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
TSPAN4-204ENST00000397404 C6orf99Q4VX62 202 aa12.02□□□□□ -0.48
TSPAN4-204ENST00000397404 KMT2CQ8NEZ4 4911 aaKnown RBP12.02□□□□□ -0.48
TSPAN4-204ENST00000397404 LST1O00453 97 aa12.02□□□□□ -0.49
TSPAN4-204ENST00000397404 UBE2V1Q13404 147 aa12.02□□□□□ -0.49
TSPAN4-204ENST00000397404 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.02□□□□□ -0.49
TSPAN4-204ENST00000397404 RYR2Q92736 4967 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms