RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TMEM126AQ9H061 195 aa9.97□□□□□ -0.81
CBX3-202ENST00000396386 LINC00588Q9Y4M8 146 aa9.97□□□□□ -0.81
CBX3-202ENST00000396386 NOTCH1P46531 2555 aa9.97□□□□□ -0.81
CBX3-202ENST00000396386 A0A087WYN8 130 aa9.96□□□□□ -0.81
CBX3-202ENST00000396386 DNAL4O96015 105 aa9.96□□□□□ -0.81
CBX3-202ENST00000396386 C2orf48Q96LS8 159 aa9.96□□□□□ -0.81
CBX3-202ENST00000396386 SIGMAR1Q99720 223 aa9.96□□□□□ -0.81
CBX3-202ENST00000396386 Q8NDZ9 215 aa9.96□□□□□ -0.82
CBX3-202ENST00000396386 CDIP1Q9H305 208 aa9.96□□□□□ -0.82
CBX3-202ENST00000396386 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
CBX3-202ENST00000396386 Q9HAA7 133 aa9.94□□□□□ -0.82
CBX3-202ENST00000396386 F8WDY8 70 aa9.93□□□□□ -0.82
CBX3-202ENST00000396386 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
CBX3-202ENST00000396386 Q6ZRU5 148 aa9.93□□□□□ -0.82
CBX3-202ENST00000396386 LECT2O14960 151 aa9.92□□□□□ -0.82
CBX3-202ENST00000396386 TGP01266 2768 aa9.91□□□□□ -0.82
CBX3-202ENST00000396386 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
CBX3-202ENST00000396386 A0A1B0GX51 115 aa9.9□□□□□ -0.82
CBX3-202ENST00000396386 XAGE1AQ9HD64 81 aa9.9□□□□□ -0.82
CBX3-202ENST00000396386 RPL18AQ02543 176 aaKnown RBP9.89□□□□□ -0.83
CBX3-202ENST00000396386 RMI2Q96E14 147 aa9.89□□□□□ -0.83
CBX3-202ENST00000396386 PRKDCP78527 4128 aaKnown RBP9.89□□□□□ -0.83
CBX3-202ENST00000396386 C22orf24Q9Y442 160 aa9.89□□□□□ -0.83
CBX3-202ENST00000396386 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
CBX3-202ENST00000396386 IGLV6-57P01721 117 aa9.88□□□□□ -0.83
CBX3-202ENST00000396386 C21orf62-AS1Q17RA5 79 aa9.88□□□□□ -0.83
CBX3-202ENST00000396386 FAM240AA0A1B0GVK7 77 aa9.87□□□□□ -0.83
CBX3-202ENST00000396386 SYCNQ0VAF6 134 aa9.87□□□□□ -0.83
CBX3-202ENST00000396386 C6orf99Q4VX62 202 aa9.87□□□□□ -0.83
CBX3-202ENST00000396386 B9D2Q9BPU9 175 aa9.87□□□□□ -0.83
CBX3-202ENST00000396386 XGP55808 180 aa9.87□□□□□ -0.83
CBX3-202ENST00000396386 HUWE1Q7Z6Z7 4374 aaKnown RBP9.86□□□□□ -0.83
CBX3-202ENST00000396386 INAFM2P0DMQ5 153 aa9.86□□□□□ -0.83
CBX3-202ENST00000396386 SCGB1A1P11684 91 aa9.86□□□□□ -0.83
CBX3-202ENST00000396386 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
CBX3-202ENST00000396386 ORMDL1Q9P0S3 153 aa9.86□□□□□ -0.83
CBX3-202ENST00000396386 VPREB1P12018 145 aa9.85□□□□□ -0.83
CBX3-202ENST00000396386 Q8N814 137 aa9.85□□□□□ -0.83
CBX3-202ENST00000396386 SNCGO76070 127 aa9.84□□□□□ -0.83
CBX3-202ENST00000396386 MT-ATP8P03928 68 aa9.84□□□□□ -0.83
CBX3-202ENST00000396386 TRAV23DV6A0A075B6W5 121 aa9.83□□□□□ -0.84
CBX3-202ENST00000396386 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
CBX3-202ENST00000396386 USP17L23D6RBM5 183 aa9.83□□□□□ -0.84
CBX3-202ENST00000396386 SLPIP03973 132 aa9.83□□□□□ -0.84
CBX3-202ENST00000396386 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
CBX3-202ENST00000396386 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
CBX3-202ENST00000396386 Q6ZRP5 223 aa9.82□□□□□ -0.84
CBX3-202ENST00000396386 ACYP1P07311 99 aa9.81□□□□□ -0.84
CBX3-202ENST00000396386 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
CBX3-202ENST00000396386 LINC00575Q6W349 94 aa9.81□□□□□ -0.84
CBX3-202ENST00000396386 DIRC1Q969H9 104 aa9.81□□□□□ -0.84
CBX3-202ENST00000396386 M0R378 163 aa9.81□□□□□ -0.84
CBX3-202ENST00000396386 UBE2DNLQ8IWF7 75 aa9.79□□□□□ -0.84
CBX3-202ENST00000396386 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
CBX3-202ENST00000396386 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
CBX3-202ENST00000396386 APLNQ9ULZ1 77 aa9.79□□□□□ -0.84
CBX3-202ENST00000396386 C9orf129Q5T035 196 aaKnown RBP9.78□□□□□ -0.84
CBX3-202ENST00000396386 hADV29S1A0JD25 119 aa9.77□□□□□ -0.85
CBX3-202ENST00000396386 ZNF73O43830 326 aaPredicted RBP9.77□□□□□ -0.85
CBX3-202ENST00000396386 TMEM256-PLSCR3K7ERE1 68 aa9.76□□□□□ -0.85
CBX3-202ENST00000396386 C14orf132Q9NPU4 83 aa9.76□□□□□ -0.85
CBX3-202ENST00000396386 TRBV7-6A0A0J9YX20 115 aa9.76□□□□□ -0.85
CBX3-202ENST00000396386 NHLRC4P0CG21 123 aaPredicted RBP9.76□□□□□ -0.85
CBX3-202ENST00000396386 COX7BP24311 80 aa9.76□□□□□ -0.85
CBX3-202ENST00000396386 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
CBX3-202ENST00000396386 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
CBX3-202ENST00000396386 ELOF1P60002 83 aaKnown RBP9.74□□□□□ -0.85
CBX3-202ENST00000396386 TTC32Q5I0X7 151 aa9.74□□□□□ -0.85
CBX3-202ENST00000396386 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
CBX3-202ENST00000396386 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
CBX3-202ENST00000396386 JMJD7-PLA2G4BH0Y9G9 81 aa9.73□□□□□ -0.85
CBX3-202ENST00000396386 PLA2G2DQ9UNK4 145 aa9.73□□□□□ -0.85
CBX3-202ENST00000396386 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
CBX3-202ENST00000396386 A0A1B0GV72 72 aa9.71□□□□□ -0.85
CBX3-202ENST00000396386 H3BQ85 93 aa9.71□□□□□ -0.85
CBX3-202ENST00000396386 Q6ZQY7 126 aa9.7□□□□□ -0.86
CBX3-202ENST00000396386 DNAH9Q9NYC9 4486 aa9.7□□□□□ -0.86
CBX3-202ENST00000396386 LOC107984640A0A0U1RRK4 108 aa9.7□□□□□ -0.86
CBX3-202ENST00000396386 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
CBX3-202ENST00000396386 PSCAO43653 123 aa9.69□□□□□ -0.86
CBX3-202ENST00000396386 GAGE2BQ13066 116 aa9.69□□□□□ -0.86
CBX3-202ENST00000396386 SMCR5Q8TEV8 140 aa9.69□□□□□ -0.86
CBX3-202ENST00000396386 C7orf33Q8WU49 177 aa9.69□□□□□ -0.86
CBX3-202ENST00000396386 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
CBX3-202ENST00000396386 COL7A1Q02388 2944 aa9.69□□□□□ -0.86
CBX3-202ENST00000396386 DNAH1Q9P2D7 4330 aa9.68□□□□□ -0.86
CBX3-202ENST00000396386 Q6Q795 121 aa9.68□□□□□ -0.86
CBX3-202ENST00000396386 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
CBX3-202ENST00000396386 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
CBX3-202ENST00000396386 LINC00643Q86TS7 51 aa9.68□□□□□ -0.86
CBX3-202ENST00000396386 KCNQ1DNQ9H478 68 aa9.68□□□□□ -0.86
CBX3-202ENST00000396386 LINC00528Q8N1L1 170 aa9.67□□□□□ -0.86
CBX3-202ENST00000396386 GHRHP01286 108 aa9.66□□□□□ -0.86
CBX3-202ENST00000396386 CCKP06307 115 aa9.66□□□□□ -0.86
CBX3-202ENST00000396386 TRBV7-7A0A0K0K1E9 115 aa9.65□□□□□ -0.86
CBX3-202ENST00000396386 FAM168BA1KXE4 195 aa9.65□□□□□ -0.86
CBX3-202ENST00000396386 LAMTOR3Q9UHA4 124 aa9.65□□□□□ -0.86
CBX3-202ENST00000396386 PRYO14603 147 aa9.64□□□□□ -0.87
CBX3-202ENST00000396386 CNBPP62633 177 aaKnown RBP9.64□□□□□ -0.87
CBX3-202ENST00000396386 C14orf177Q52M58 125 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms