RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 COPS9Q8WXC6 57 aa13.42□□□□□ -0.26
FXN-202ENST00000396364 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
FXN-202ENST00000396364 LINC00528Q8N1L1 170 aa13.41□□□□□ -0.26
FXN-202ENST00000396364 TP73-AS1Q9UF72 201 aa13.41□□□□□ -0.26
FXN-202ENST00000396364 APOBP04114 4563 aaKnown RBP13.4□□□□□ -0.26
FXN-202ENST00000396364 S100A12P80511 92 aa13.39□□□□□ -0.27
FXN-202ENST00000396364 COX8AP10176 69 aa13.38□□□□□ -0.27
FXN-202ENST00000396364 SERTAD4-AS1Q5TG53 156 aa13.38□□□□□ -0.27
FXN-202ENST00000396364 Q6ZVH6 145 aa13.38□□□□□ -0.27
FXN-202ENST00000396364 Q8N1X5 172 aa13.38□□□□□ -0.27
FXN-202ENST00000396364 DAND5Q8N907 189 aa13.38□□□□□ -0.27
FXN-202ENST00000396364 IGLV5-37A0A075B6J1 123 aa13.37□□□□□ -0.27
FXN-202ENST00000396364 PLA2G1BP04054 148 aaKnown RBP13.37□□□□□ -0.27
FXN-202ENST00000396364 BOD1L2Q8IYS8 172 aa13.37□□□□□ -0.27
FXN-202ENST00000396364 C22orf24Q9Y442 160 aa13.37□□□□□ -0.27
FXN-202ENST00000396364 LOC107984156A0A0G2JMH3 177 aa13.36□□□□□ -0.27
FXN-202ENST00000396364 UBE2BP63146 152 aa13.36□□□□□ -0.27
FXN-202ENST00000396364 PHF5AQ7RTV0 110 aaKnown RBP13.36□□□□□ -0.27
FXN-202ENST00000396364 MRPL55Q7Z7F7 128 aaKnown RBP13.36□□□□□ -0.27
FXN-202ENST00000396364 ARL17AQ8IVW1 177 aa13.36□□□□□ -0.27
FXN-202ENST00000396364 DLEU1O43261 78 aa13.35□□□□□ -0.27
FXN-202ENST00000396364 ADAMTSL4-AS1Q5T5F5 129 aa13.35□□□□□ -0.27
FXN-202ENST00000396364 VPREB1P12018 145 aa13.34□□□□□ -0.27
FXN-202ENST00000396364 LITAFQ99732 161 aa13.34□□□□□ -0.27
FXN-202ENST00000396364 SPANXDQ9BXN6 97 aa13.34□□□□□ -0.27
FXN-202ENST00000396364 SPANXCQ9NY87 97 aa13.34□□□□□ -0.27
FXN-202ENST00000396364 IFITM1P13164 125 aa13.33□□□□□ -0.28
FXN-202ENST00000396364 RPL37AP61513 92 aaKnown RBP13.33□□□□□ -0.28
FXN-202ENST00000396364 KRTAP7-1Q8IUC3 87 aa13.33□□□□□ -0.28
FXN-202ENST00000396364 KIAA1109Q2LD37 5005 aa13.33□□□□□ -0.28
FXN-202ENST00000396364 NPC2P61916 151 aa13.32□□□□□ -0.28
FXN-202ENST00000396364 Q5VSD8 79 aa13.32□□□□□ -0.28
FXN-202ENST00000396364 SLC25A34Q6PIV7 304 aa13.32□□□□□ -0.28
FXN-202ENST00000396364 LINC00308Q8TCZ7 52 aa13.32□□□□□ -0.28
FXN-202ENST00000396364 C14orf144Q96I85 54 aa13.32□□□□□ -0.28
FXN-202ENST00000396364 NDUFC2O95298 119 aa13.31□□□□□ -0.28
FXN-202ENST00000396364 SRSF9Q13242 221 aaKnown RBP eCLIP13.31□□□□□ -0.28
FXN-202ENST00000396364 RYR1P21817 5038 aa13.3□□□□□ -0.28
FXN-202ENST00000396364 M0R378 163 aa13.3□□□□□ -0.28
FXN-202ENST00000396364 SMIM6P0DI80 62 aa13.3□□□□□ -0.28
FXN-202ENST00000396364 SPANXB1Q9NS25 103 aaPredicted RBP13.3□□□□□ -0.28
FXN-202ENST00000396364 HSPG2P98160 4391 aa13.3□□□□□ -0.28
FXN-202ENST00000396364 PPDPFQ9H3Y8 114 aa13.29□□□□□ -0.28
FXN-202ENST00000396364 LINC00167Q96N53 147 aa13.28□□□□□ -0.28
FXN-202ENST00000396364 TRBV10-2A0A0K0K1G8 114 aa13.27□□□□□ -0.29
FXN-202ENST00000396364 GAGE10A6NGK3 116 aa13.26□□□□□ -0.29
FXN-202ENST00000396364 NCR3O14931 201 aa13.25□□□□□ -0.29
FXN-202ENST00000396364 SOSTDC1Q6X4U4 206 aa13.25□□□□□ -0.29
FXN-202ENST00000396364 LINC00518Q8N0U6 118 aa13.25□□□□□ -0.29
FXN-202ENST00000396364 HIGD1BQ9P298 99 aa13.25□□□□□ -0.29
FXN-202ENST00000396364 LOC105371267A0A1B0GV96 52 aa13.24□□□□□ -0.29
FXN-202ENST00000396364 HIST1H4GQ99525 98 aa13.24□□□□□ -0.29
FXN-202ENST00000396364 RPL37AP8A6NKH3 93 aa13.23□□□□□ -0.29
FXN-202ENST00000396364 PRR3P79522 188 aaKnown RBP13.23□□□□□ -0.29
FXN-202ENST00000396364 Q8NDZ9 215 aa13.23□□□□□ -0.29
FXN-202ENST00000396364 PSORS1C2Q9UIG4 136 aa13.23□□□□□ -0.29
FXN-202ENST00000396364 CBY1Q9Y3M2 126 aa13.23□□□□□ -0.29
FXN-202ENST00000396364 C1orf137Q5JT78 98 aa13.22□□□□□ -0.29
FXN-202ENST00000396364 S100A7L2Q5SY68 101 aa13.22□□□□□ -0.29
FXN-202ENST00000396364 MUSTN1Q8IVN3 82 aa13.22□□□□□ -0.29
FXN-202ENST00000396364 IGLV1-50A0A075B6I6 118 aa13.21□□□□□ -0.29
FXN-202ENST00000396364 IGKV2-28A0A075B6P5 120 aa13.21□□□□□ -0.29
FXN-202ENST00000396364 IGKV2D-28P01615 120 aa13.21□□□□□ -0.29
FXN-202ENST00000396364 UQCR10Q9UDW1 63 aa13.2□□□□□ -0.3
FXN-202ENST00000396364 EIF4EBP3O60516 100 aaPredicted RBP13.19□□□□□ -0.3
FXN-202ENST00000396364 DDTP30046 118 aa13.18□□□□□ -0.3
FXN-202ENST00000396364 PRYO14603 147 aa13.16□□□□□ -0.3
FXN-202ENST00000396364 TAL2Q16559 108 aa13.16□□□□□ -0.3
FXN-202ENST00000396364 REG3GQ6UW15 175 aa13.16□□□□□ -0.3
FXN-202ENST00000396364 OR13C6PQ8NH95 151 aa13.16□□□□□ -0.3
FXN-202ENST00000396364 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
FXN-202ENST00000396364 TRBV10-3A0A0K0K1G6 114 aa13.15□□□□□ -0.3
FXN-202ENST00000396364 KRTAP11-1Q8IUC1 163 aa13.15□□□□□ -0.3
FXN-202ENST00000396364 BCE1O60756 84 aa13.14□□□□□ -0.31
FXN-202ENST00000396364 C2orf91Q6ZV80 131 aa13.14□□□□□ -0.31
FXN-202ENST00000396364 IGLV6-57P01721 117 aa13.13□□□□□ -0.31
FXN-202ENST00000396364 IGLV7-43P04211 117 aa13.13□□□□□ -0.31
FXN-202ENST00000396364 KCNQ1DNQ9H478 68 aa13.13□□□□□ -0.31
FXN-202ENST00000396364 TRAV13-2A0A0B4J235 113 aa13.12□□□□□ -0.31
FXN-202ENST00000396364 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
FXN-202ENST00000396364 HERC2O95714 4834 aa13.12□□□□□ -0.31
FXN-202ENST00000396364 C12orf57Q99622 126 aa13.11□□□□□ -0.31
FXN-202ENST00000396364 FAT1Q14517 4588 aa13.1□□□□□ -0.31
FXN-202ENST00000396364 TMEM238LA0A1B0GVL6 79 aa13.1□□□□□ -0.31
FXN-202ENST00000396364 A4D1N5 150 aa13.1□□□□□ -0.31
FXN-202ENST00000396364 A6NDN8 102 aa13.1□□□□□ -0.31
FXN-202ENST00000396364 A6NJY4 79 aa13.1□□□□□ -0.31
FXN-202ENST00000396364 RPL28P46779 137 aaKnown RBP13.1□□□□□ -0.31
FXN-202ENST00000396364 UBE2AP49459 152 aa13.1□□□□□ -0.31
FXN-202ENST00000396364 SPINK6Q6UWN8 80 aa13.1□□□□□ -0.31
FXN-202ENST00000396364 KRTAP17-1Q9BYP8 105 aa13.1□□□□□ -0.31
FXN-202ENST00000396364 VPS13BQ7Z7G8 4022 aa13.09□□□□□ -0.31
FXN-202ENST00000396364 TRAV23DV6A0A075B6W5 121 aa13.09□□□□□ -0.31
FXN-202ENST00000396364 INAFM2P0DMQ5 153 aa13.09□□□□□ -0.31
FXN-202ENST00000396364 HNRNPA3P51991 378 aaKnown RBP13.09□□□□□ -0.31
FXN-202ENST00000396364 ETDCA0A1B0GVM5 59 aa13.08□□□□□ -0.32
FXN-202ENST00000396364 TSTD3H0UI37 97 aa13.08□□□□□ -0.32
FXN-202ENST00000396364 HINT1P49773 126 aaPredicted RBP13.08□□□□□ -0.32
FXN-202ENST00000396364 HSD52Q0P140 79 aa13.08□□□□□ -0.32
FXN-202ENST00000396364 FAM19A1Q7Z5A9 133 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 299.9 ms