RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 A0A0B4J2C4 111 aa13.2□□□□□ -0.3
VCPKMT-202ENST00000395860 HYDINQ4G0P3 5121 aa13.18□□□□□ -0.3
VCPKMT-202ENST00000395860 DNAH2Q9P225 4427 aa13.18□□□□□ -0.3
VCPKMT-202ENST00000395860 GAGE2BQ13066 116 aa13.17□□□□□ -0.3
VCPKMT-202ENST00000395860 C9orf163Q8N9P6 203 aa13.17□□□□□ -0.3
VCPKMT-202ENST00000395860 NDUFC2O95298 119 aa13.16□□□□□ -0.3
VCPKMT-202ENST00000395860 PRO1854Q9UHT4 67 aa13.16□□□□□ -0.3
VCPKMT-202ENST00000395860 TAX1BP3O14907 124 aa13.15□□□□□ -0.31
VCPKMT-202ENST00000395860 C9orf129Q5T035 196 aaKnown RBP13.15□□□□□ -0.31
VCPKMT-202ENST00000395860 IGKV2-28A0A075B6P5 120 aa13.14□□□□□ -0.31
VCPKMT-202ENST00000395860 IGKV2D-28P01615 120 aa13.14□□□□□ -0.31
VCPKMT-202ENST00000395860 PKIGQ9Y2B9 76 aa13.14□□□□□ -0.31
VCPKMT-202ENST00000395860 Q8NDZ9 215 aa13.13□□□□□ -0.31
VCPKMT-202ENST00000395860 PRR3P79522 188 aaKnown RBP13.12□□□□□ -0.31
VCPKMT-202ENST00000395860 LINC01620Q4KN68 170 aa13.12□□□□□ -0.31
VCPKMT-202ENST00000395860 PGPEP1Q9NXJ5 209 aa13.12□□□□□ -0.31
VCPKMT-202ENST00000395860 SACSQ9NZJ4 4579 aa13.11□□□□□ -0.31
VCPKMT-202ENST00000395860 A0A096LNI7 61 aa13.11□□□□□ -0.31
VCPKMT-202ENST00000395860 TRAV13-2A0A0B4J235 113 aa13.11□□□□□ -0.31
VCPKMT-202ENST00000395860 C16orf90A8MZG2 172 aa13.11□□□□□ -0.31
VCPKMT-202ENST00000395860 NCR3O14931 201 aa13.11□□□□□ -0.31
VCPKMT-202ENST00000395860 FUSP35637 526 aaKnown RBP eCLIP13.11□□□□□ -0.31
VCPKMT-202ENST00000395860 IGLV5-52A0A0A0MRZ9 124 aa13.1□□□□□ -0.31
VCPKMT-202ENST00000395860 H7C2G1 150 aa13.1□□□□□ -0.31
VCPKMT-202ENST00000395860 RPL13AP40429 203 aaKnown RBP13.1□□□□□ -0.31
VCPKMT-202ENST00000395860 LINC00337Q8N6G1 96 aa13.1□□□□□ -0.31
VCPKMT-202ENST00000395860 IGKV2-24A0A0C4DH68 120 aa13.09□□□□□ -0.31
VCPKMT-202ENST00000395860 DNAH17Q9UFH2 4485 aa13.09□□□□□ -0.31
VCPKMT-202ENST00000395860 VPREB1P12018 145 aa13.09□□□□□ -0.31
VCPKMT-202ENST00000395860 FRAS1Q86XX4 4008 aa13.08□□□□□ -0.31
VCPKMT-202ENST00000395860 C9orf118A6NHY6 69 aa13.08□□□□□ -0.32
VCPKMT-202ENST00000395860 TSPAN13O95857 204 aa13.08□□□□□ -0.32
VCPKMT-202ENST00000395860 Q1RN00 199 aa13.08□□□□□ -0.32
VCPKMT-202ENST00000395860 SDIM1Q6ZPB5 146 aa13.08□□□□□ -0.32
VCPKMT-202ENST00000395860 OR13C6PQ8NH95 151 aa13.08□□□□□ -0.32
VCPKMT-202ENST00000395860 NAA38Q9BRA0 125 aaKnown RBP13.07□□□□□ -0.32
VCPKMT-202ENST00000395860 H3BUT2 72 aa13.07□□□□□ -0.32
VCPKMT-202ENST00000395860 PLA2G2DQ9UNK4 145 aa13.07□□□□□ -0.32
VCPKMT-202ENST00000395860 TRBV10-2A0A0K0K1G8 114 aa13.06□□□□□ -0.32
VCPKMT-202ENST00000395860 SERTAD4-AS1Q5TG53 156 aa13.05□□□□□ -0.32
VCPKMT-202ENST00000395860 FAM168BA1KXE4 195 aa13.04□□□□□ -0.32
VCPKMT-202ENST00000395860 S100A7L2Q5SY68 101 aa13.04□□□□□ -0.32
VCPKMT-202ENST00000395860 NKAPP1Q8N9T2 125 aa13.04□□□□□ -0.32
VCPKMT-202ENST00000395860 CHTF8P0CG12 524 aa13.04□□□□□ -0.32
VCPKMT-202ENST00000395860 KRTAP10-2P60368 255 aa13.03□□□□□ -0.32
VCPKMT-202ENST00000395860 LINC00336Q6ZUF6 198 aa13.03□□□□□ -0.32
VCPKMT-202ENST00000395860 TMEM126AQ9H061 195 aa13.03□□□□□ -0.32
VCPKMT-202ENST00000395860 LINC00474Q9P2X8 69 aa13.03□□□□□ -0.32
VCPKMT-202ENST00000395860 M0R378 163 aa13.02□□□□□ -0.32
VCPKMT-202ENST00000395860 FAM19A5Q7Z5A7 132 aaPredicted RBP13.02□□□□□ -0.32
VCPKMT-202ENST00000395860 PSMB2P49721 201 aa13.01□□□□□ -0.33
VCPKMT-202ENST00000395860 IGLV5-37A0A075B6J1 123 aa13□□□□□ -0.33
VCPKMT-202ENST00000395860 A0A1B0GV90 55 aa12.99□□□□□ -0.33
VCPKMT-202ENST00000395860 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
VCPKMT-202ENST00000395860 A0A1W2PPM0 123 aa12.98□□□□□ -0.33
VCPKMT-202ENST00000395860 DPH3Q96FX2 82 aa12.98□□□□□ -0.33
VCPKMT-202ENST00000395860 TRBV10-3A0A0K0K1G6 114 aa12.97□□□□□ -0.33
VCPKMT-202ENST00000395860 A0A1W2PNN7 141 aa12.97□□□□□ -0.33
VCPKMT-202ENST00000395860 IGLV6-57P01721 117 aa12.97□□□□□ -0.33
VCPKMT-202ENST00000395860 SMIM11BQ8TCY0 68 aa12.97□□□□□ -0.33
VCPKMT-202ENST00000395860 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
VCPKMT-202ENST00000395860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.97□□□□□ -0.33
VCPKMT-202ENST00000395860 GAGE10A6NGK3 116 aa12.96□□□□□ -0.34
VCPKMT-202ENST00000395860 PANO1I0J062 215 aa12.96□□□□□ -0.34
VCPKMT-202ENST00000395860 TRIAP1O43715 76 aa12.96□□□□□ -0.34
VCPKMT-202ENST00000395860 FABP2P12104 132 aa12.96□□□□□ -0.34
VCPKMT-202ENST00000395860 SPACA4Q8TDM5 124 aa12.96□□□□□ -0.34
VCPKMT-202ENST00000395860 C7orf33Q8WU49 177 aa12.96□□□□□ -0.34
VCPKMT-202ENST00000395860 SCGB1C2P0DMR2 95 aa12.95□□□□□ -0.34
VCPKMT-202ENST00000395860 RPL28P46779 137 aaKnown RBP12.95□□□□□ -0.34
VCPKMT-202ENST00000395860 RYR2Q92736 4967 aa12.95□□□□□ -0.34
VCPKMT-202ENST00000395860 M0QXV9 152 aa12.94□□□□□ -0.34
VCPKMT-202ENST00000395860 MRPL55Q7Z7F7 128 aaKnown RBP12.94□□□□□ -0.34
VCPKMT-202ENST00000395860 HECTD4Q9Y4D8 3996 aa12.94□□□□□ -0.34
VCPKMT-202ENST00000395860 COX6CP09669 75 aa12.94□□□□□ -0.34
VCPKMT-202ENST00000395860 VAMP3Q15836 100 aa12.94□□□□□ -0.34
VCPKMT-202ENST00000395860 KMT2CQ8NEZ4 4911 aaKnown RBP12.93□□□□□ -0.34
VCPKMT-202ENST00000395860 LYRM7Q5U5X0 104 aa12.93□□□□□ -0.34
VCPKMT-202ENST00000395860 FAT2Q9NYQ8 4349 aa12.93□□□□□ -0.34
VCPKMT-202ENST00000395860 LINC00167Q96N53 147 aa12.92□□□□□ -0.34
VCPKMT-202ENST00000395860 TRAV23DV6A0A075B6W5 121 aa12.92□□□□□ -0.34
VCPKMT-202ENST00000395860 CBY1Q9Y3M2 126 aa12.91□□□□□ -0.34
VCPKMT-202ENST00000395860 RPL37AP8A6NKH3 93 aa12.9□□□□□ -0.34
VCPKMT-202ENST00000395860 SPCS1Q9Y6A9 102 aa12.89□□□□□ -0.35
VCPKMT-202ENST00000395860 DNAH11Q96DT5 4516 aa12.89□□□□□ -0.35
VCPKMT-202ENST00000395860 A0A087WYN8 130 aa12.89□□□□□ -0.35
VCPKMT-202ENST00000395860 IGLV1-50A0A075B6I6 118 aa12.88□□□□□ -0.35
VCPKMT-202ENST00000395860 C6orf99Q4VX62 202 aa12.88□□□□□ -0.35
VCPKMT-202ENST00000395860 PHF5AQ7RTV0 110 aaKnown RBP12.86□□□□□ -0.35
VCPKMT-202ENST00000395860 PKD1P98161 4303 aa12.86□□□□□ -0.35
VCPKMT-202ENST00000395860 A0A1B0GVY2 172 aa12.86□□□□□ -0.35
VCPKMT-202ENST00000395860 ZNF73O43830 326 aaPredicted RBP12.86□□□□□ -0.35
VCPKMT-202ENST00000395860 DIRC1Q969H9 104 aa12.86□□□□□ -0.35
VCPKMT-202ENST00000395860 KCNQ1DNQ9H478 68 aa12.86□□□□□ -0.35
VCPKMT-202ENST00000395860 KRTAP10-1P60331 282 aa12.85□□□□□ -0.35
VCPKMT-202ENST00000395860 K7EP34 96 aa12.84□□□□□ -0.35
VCPKMT-202ENST00000395860 TCL1BO95988 128 aa12.84□□□□□ -0.35
VCPKMT-202ENST00000395860 CLEC2BQ92478 149 aa12.84□□□□□ -0.35
VCPKMT-202ENST00000395860 TRBV20-1A0A075B6N2 111 aa12.84□□□□□ -0.35
VCPKMT-202ENST00000395860 EPM2AB3EWF7 344 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms