RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 ATP5LO75964 103 aa8.01□□□□□ -1.13
SCAF11-203ENST00000395453 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-203ENST00000395453 HBDP02042 147 aa8□□□□□ -1.13
SCAF11-203ENST00000395453 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
SCAF11-203ENST00000395453 A0A087X002 238 aa7.99□□□□□ -1.13
SCAF11-203ENST00000395453 GAGE10A6NGK3 116 aa7.99□□□□□ -1.13
SCAF11-203ENST00000395453 NDUFA6P56556 154 aa7.99□□□□□ -1.13
SCAF11-203ENST00000395453 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
SCAF11-203ENST00000395453 PFN2P35080 140 aa7.98□□□□□ -1.13
SCAF11-203ENST00000395453 COX17Q14061 63 aa7.98□□□□□ -1.13
SCAF11-203ENST00000395453 PMCHL1Q16048 86 aa7.98□□□□□ -1.13
SCAF11-203ENST00000395453 C11orf86A6NJI1 115 aa7.97□□□□□ -1.13
SCAF11-203ENST00000395453 VPREB1P12018 145 aa7.97□□□□□ -1.13
SCAF11-203ENST00000395453 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
SCAF11-203ENST00000395453 ERG28Q9UKR5 140 aa7.97□□□□□ -1.13
SCAF11-203ENST00000395453 SCO1O75880 301 aa7.96□□□□□ -1.14
SCAF11-203ENST00000395453 APOC3P02656 99 aa7.96□□□□□ -1.14
SCAF11-203ENST00000395453 CRYGAP11844 174 aa7.96□□□□□ -1.14
SCAF11-203ENST00000395453 BAGE3Q86Y29 109 aa7.96□□□□□ -1.14
SCAF11-203ENST00000395453 SNAPINO95295 136 aa7.95□□□□□ -1.14
SCAF11-203ENST00000395453 ZNF625Q96I27 306 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-203ENST00000395453 YPEL4Q96NS1 127 aa7.95□□□□□ -1.14
SCAF11-203ENST00000395453 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
SCAF11-203ENST00000395453 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
SCAF11-203ENST00000395453 TMEM170BQ5T4T1 132 aa7.94□□□□□ -1.14
SCAF11-203ENST00000395453 SFTA2Q6UW10 78 aa7.94□□□□□ -1.14
SCAF11-203ENST00000395453 SVBPQ8N300 66 aa7.94□□□□□ -1.14
SCAF11-203ENST00000395453 UBE2AP49459 152 aa7.93□□□□□ -1.14
SCAF11-203ENST00000395453 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
SCAF11-203ENST00000395453 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
SCAF11-203ENST00000395453 Q8NDZ9 215 aa7.93□□□□□ -1.14
SCAF11-203ENST00000395453 TYMSOSQ8TAI1 123 aa7.93□□□□□ -1.14
SCAF11-203ENST00000395453 ANAPC11Q9NYG5 84 aa7.93□□□□□ -1.14
SCAF11-203ENST00000395453 TSPAN13O95857 204 aa7.92□□□□□ -1.14
SCAF11-203ENST00000395453 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
SCAF11-203ENST00000395453 CHTOPQ9Y3Y2 248 aaKnown RBP7.92□□□□□ -1.14
SCAF11-203ENST00000395453 TRAV12-1A0A0B4J245 112 aa7.91□□□□□ -1.14
SCAF11-203ENST00000395453 NDUFA5Q16718 116 aa7.91□□□□□ -1.14
SCAF11-203ENST00000395453 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
SCAF11-203ENST00000395453 TMEM126AQ9H061 195 aa7.91□□□□□ -1.14
SCAF11-203ENST00000395453 TMEM223A0PJW6 202 aa7.9□□□□□ -1.14
SCAF11-203ENST00000395453 TMEM238C9JI98 176 aa7.9□□□□□ -1.14
SCAF11-203ENST00000395453 M0R378 163 aa7.9□□□□□ -1.14
SCAF11-203ENST00000395453 LINC00310P59036 64 aa7.89□□□□□ -1.15
SCAF11-203ENST00000395453 IFI27L1Q96BM0 104 aa7.89□□□□□ -1.15
SCAF11-203ENST00000395453 PRLHP81277 87 aa7.88□□□□□ -1.15
SCAF11-203ENST00000395453 FAM19A1Q7Z5A9 133 aa7.88□□□□□ -1.15
SCAF11-203ENST00000395453 H3BS24 57 aa7.87□□□□□ -1.15
SCAF11-203ENST00000395453 LINC00158P58513 81 aa7.87□□□□□ -1.15
SCAF11-203ENST00000395453 PLEKHB2Q96CS7 222 aa7.87□□□□□ -1.15
SCAF11-203ENST00000395453 CTAG1AP78358 180 aa7.85□□□□□ -1.15
SCAF11-203ENST00000395453 IGKV2D-26A0A0A0MRZ7 120 aa7.84□□□□□ -1.15
SCAF11-203ENST00000395453 CBLN2Q8IUK8 224 aa7.84□□□□□ -1.15
SCAF11-203ENST00000395453 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
SCAF11-203ENST00000395453 LINC00304Q8N9R0 145 aa7.84□□□□□ -1.15
SCAF11-203ENST00000395453 A0A0U1RRA0 63 aa7.83□□□□□ -1.16
SCAF11-203ENST00000395453 SMIM13P0DJ93 91 aa7.83□□□□□ -1.16
SCAF11-203ENST00000395453 HSBP1O75506 76 aa7.82□□□□□ -1.16
SCAF11-203ENST00000395453 HERV-K104P63124 156 aa7.82□□□□□ -1.16
SCAF11-203ENST00000395453 MIR7-3HGQ8N6C7 128 aa7.81□□□□□ -1.16
SCAF11-203ENST00000395453 LINC00587B1AMM8 73 aa7.8□□□□□ -1.16
SCAF11-203ENST00000395453 ATP6V1G1O75348 118 aa7.8□□□□□ -1.16
SCAF11-203ENST00000395453 TRGC2P03986 189 aa7.8□□□□□ -1.16
SCAF11-203ENST00000395453 BOD1L2Q8IYS8 172 aa7.8□□□□□ -1.16
SCAF11-203ENST00000395453 HIGD2AQ9BW72 106 aa7.8□□□□□ -1.16
SCAF11-203ENST00000395453 KCNQ1DNQ9H478 68 aa7.8□□□□□ -1.16
SCAF11-203ENST00000395453 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
SCAF11-203ENST00000395453 KRTAP4-16G5E9R7 235 aaPredicted RBP7.79□□□□□ -1.16
SCAF11-203ENST00000395453 PRYO14603 147 aa7.79□□□□□ -1.16
SCAF11-203ENST00000395453 SPRR1AP35321 89 aa7.79□□□□□ -1.16
SCAF11-203ENST00000395453 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
SCAF11-203ENST00000395453 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
SCAF11-203ENST00000395453 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
SCAF11-203ENST00000395453 CRCT1Q9UGL9 99 aa7.79□□□□□ -1.16
SCAF11-203ENST00000395453 LOC107984156A0A0G2JMH3 177 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 ARL17AQ8IVW1 177 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 LINC00337Q8N6G1 96 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 RETNLBQ9BQ08 111 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 FSIP2Q5CZC0 6907 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 SERF1AO75920 110 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 LEPROTL1O95214 131 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 TSPEAR-AS2P59090 65 aa7.78□□□□□ -1.16
SCAF11-203ENST00000395453 NCR3O14931 201 aa7.77□□□□□ -1.17
SCAF11-203ENST00000395453 LEPROTO15243 131 aa7.77□□□□□ -1.17
SCAF11-203ENST00000395453 MAP1LC3CQ9BXW4 147 aa7.77□□□□□ -1.17
SCAF11-203ENST00000395453 TRBV10-3A0A0K0K1G6 114 aa7.76□□□□□ -1.17
SCAF11-203ENST00000395453 H0Y8G0 127 aa7.76□□□□□ -1.17
SCAF11-203ENST00000395453 PLNP26678 52 aa7.76□□□□□ -1.17
SCAF11-203ENST00000395453 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
SCAF11-203ENST00000395453 KRTAP5-3Q6L8H2 238 aa7.76□□□□□ -1.17
SCAF11-203ENST00000395453 SPAG11AQ6PDA7 123 aa7.76□□□□□ -1.17
SCAF11-203ENST00000395453 ZNF706Q9Y5V0 76 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-203ENST00000395453 SMCR5Q8TEV8 140 aa7.75□□□□□ -1.17
SCAF11-203ENST00000395453 CDIP1Q9H305 208 aa7.75□□□□□ -1.17
SCAF11-203ENST00000395453 IGLV7-46A0A075B6I9 117 aa7.74□□□□□ -1.17
SCAF11-203ENST00000395453 J3QQQ9 107 aa7.74□□□□□ -1.17
SCAF11-203ENST00000395453 HSPB8Q9UJY1 196 aa7.74□□□□□ -1.17
SCAF11-203ENST00000395453 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
SCAF11-203ENST00000395453 TRBV10-2A0A0K0K1G8 114 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms