RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 HBDP02042 147 aa11.1□□□□□ -0.63
COL11A2-204ENST00000395194 TMEM170BQ5T4T1 132 aa11.1□□□□□ -0.63
COL11A2-204ENST00000395194 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
COL11A2-204ENST00000395194 KRTAP9-2Q9BYQ4 174 aa11.1□□□□□ -0.63
COL11A2-204ENST00000395194 RPS10P5Q9NQ39 176 aa11.1□□□□□ -0.63
COL11A2-204ENST00000395194 A0A0U1RRA0 63 aa11.09□□□□□ -0.63
COL11A2-204ENST00000395194 COX17Q14061 63 aa11.09□□□□□ -0.63
COL11A2-204ENST00000395194 NDUFA5Q16718 116 aa11.09□□□□□ -0.63
COL11A2-204ENST00000395194 BAGE3Q86Y29 109 aa11.09□□□□□ -0.63
COL11A2-204ENST00000395194 PLEKHB2Q96CS7 222 aa11.09□□□□□ -0.63
COL11A2-204ENST00000395194 LINC00614P0C842 121 aa11.08□□□□□ -0.64
COL11A2-204ENST00000395194 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
COL11A2-204ENST00000395194 APOC3P02656 99 aa11.07□□□□□ -0.64
COL11A2-204ENST00000395194 LCE2AQ5TA79 106 aaPredicted RBP11.07□□□□□ -0.64
COL11A2-204ENST00000395194 LINC00158P58513 81 aa11.06□□□□□ -0.64
COL11A2-204ENST00000395194 SVBPQ8N300 66 aa11.06□□□□□ -0.64
COL11A2-204ENST00000395194 TRAPPC1Q9Y5R8 145 aa11.06□□□□□ -0.64
COL11A2-204ENST00000395194 SNAPINO95295 136 aa11.05□□□□□ -0.64
COL11A2-204ENST00000395194 PPDPFQ9H3Y8 114 aa11.03□□□□□ -0.64
COL11A2-204ENST00000395194 SPRR4Q96PI1 79 aa11.02□□□□□ -0.65
COL11A2-204ENST00000395194 CHTOPQ9Y3Y2 248 aaKnown RBP11.02□□□□□ -0.65
COL11A2-204ENST00000395194 SFTA2Q6UW10 78 aa11.01□□□□□ -0.65
COL11A2-204ENST00000395194 NCR3O14931 201 aa10.99□□□□□ -0.65
COL11A2-204ENST00000395194 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
COL11A2-204ENST00000395194 DAND5Q8N907 189 aa10.99□□□□□ -0.65
COL11A2-204ENST00000395194 TMEM223A0PJW6 202 aa10.98□□□□□ -0.65
COL11A2-204ENST00000395194 MEIG1Q5JSS6 88 aa10.97□□□□□ -0.65
COL11A2-204ENST00000395194 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
COL11A2-204ENST00000395194 ATP6V1G1O75348 118 aa10.96□□□□□ -0.65
COL11A2-204ENST00000395194 CTAG1AP78358 180 aa10.96□□□□□ -0.65
COL11A2-204ENST00000395194 SPAG11AQ6PDA7 123 aa10.96□□□□□ -0.65
COL11A2-204ENST00000395194 Q8NBF4 154 aa10.96□□□□□ -0.65
COL11A2-204ENST00000395194 ZNF706Q9Y5V0 76 aaPredicted RBP10.96□□□□□ -0.65
COL11A2-204ENST00000395194 PRYO14603 147 aa10.95□□□□□ -0.66
COL11A2-204ENST00000395194 C4orf48Q5BLP8 95 aa10.95□□□□□ -0.66
COL11A2-204ENST00000395194 SLC7A5P1Q8MH63 180 aa10.95□□□□□ -0.66
COL11A2-204ENST00000395194 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
COL11A2-204ENST00000395194 SMCR5Q8TEV8 140 aa10.93□□□□□ -0.66
COL11A2-204ENST00000395194 IFI27L1Q96BM0 104 aa10.93□□□□□ -0.66
COL11A2-204ENST00000395194 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
COL11A2-204ENST00000395194 TRBV10-3A0A0K0K1G6 114 aa10.91□□□□□ -0.66
COL11A2-204ENST00000395194 ETDCA0A1B0GVM5 59 aa10.91□□□□□ -0.66
COL11A2-204ENST00000395194 SPRR1AP35321 89 aa10.9□□□□□ -0.66
COL11A2-204ENST00000395194 FP248Q71RG6 208 aaPredicted RBP10.9□□□□□ -0.66
COL11A2-204ENST00000395194 LINC00337Q8N6G1 96 aa10.9□□□□□ -0.66
COL11A2-204ENST00000395194 YPEL4Q96NS1 127 aa10.9□□□□□ -0.66
COL11A2-204ENST00000395194 KCNQ1DNQ9H478 68 aa10.89□□□□□ -0.67
COL11A2-204ENST00000395194 KRTAP4-16G5E9R7 235 aaPredicted RBP10.88□□□□□ -0.67
COL11A2-204ENST00000395194 KRTAP13-3Q3SY46 172 aa10.88□□□□□ -0.67
COL11A2-204ENST00000395194 GAGE2AQ6NT46 116 aa10.88□□□□□ -0.67
COL11A2-204ENST00000395194 NDUFA12Q9UI09 145 aa10.88□□□□□ -0.67
COL11A2-204ENST00000395194 H0Y8G0 127 aa10.87□□□□□ -0.67
COL11A2-204ENST00000395194 CHCHD1Q96BP2 118 aaKnown RBP10.87□□□□□ -0.67
COL11A2-204ENST00000395194 HERV-K104P63124 156 aa10.86□□□□□ -0.67
COL11A2-204ENST00000395194 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
COL11A2-204ENST00000395194 IGLV9-49A0A0B4J1Y8 123 aa10.85□□□□□ -0.67
COL11A2-204ENST00000395194 ERC2-IT1O76042 136 aa10.84□□□□□ -0.67
COL11A2-204ENST00000395194 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
COL11A2-204ENST00000395194 MOBPQ13875 183 aa10.84□□□□□ -0.67
COL11A2-204ENST00000395194 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
COL11A2-204ENST00000395194 MYMXA0A1B0GTQ4 84 aa10.83□□□□□ -0.68
COL11A2-204ENST00000395194 B5MCH6 92 aa10.83□□□□□ -0.68
COL11A2-204ENST00000395194 SPINK1P00995 79 aa10.83□□□□□ -0.68
COL11A2-204ENST00000395194 HSBP1O75506 76 aa10.82□□□□□ -0.68
COL11A2-204ENST00000395194 MAP1LC3CQ9BXW4 147 aa10.82□□□□□ -0.68
COL11A2-204ENST00000395194 LINC00587B1AMM8 73 aa10.81□□□□□ -0.68
COL11A2-204ENST00000395194 S100A12P80511 92 aa10.81□□□□□ -0.68
COL11A2-204ENST00000395194 KRTAP9-6A0A140TA67 174 aa10.8□□□□□ -0.68
COL11A2-204ENST00000395194 DDTP30046 118 aa10.8□□□□□ -0.68
COL11A2-204ENST00000395194 ASB16-AS1Q495Z4 193 aa10.8□□□□□ -0.68
COL11A2-204ENST00000395194 KRTAP4-1Q9BYQ7 146 aa10.8□□□□□ -0.68
COL11A2-204ENST00000395194 Q9BRP9 147 aa10.79□□□□□ -0.68
COL11A2-204ENST00000395194 LEPROTO15243 131 aa10.77□□□□□ -0.69
COL11A2-204ENST00000395194 Q8N377 158 aa10.76□□□□□ -0.69
COL11A2-204ENST00000395194 Q6ZRX8 168 aa10.75□□□□□ -0.69
COL11A2-204ENST00000395194 TRBV10-2A0A0K0K1G8 114 aa10.74□□□□□ -0.69
COL11A2-204ENST00000395194 LEPROTL1O95214 131 aa10.74□□□□□ -0.69
COL11A2-204ENST00000395194 SEC61BP60468 96 aaKnown RBP10.74□□□□□ -0.69
COL11A2-204ENST00000395194 PMCHL2Q9BQD1 86 aa10.74□□□□□ -0.69
COL11A2-204ENST00000395194 MIEN1Q9BRT3 115 aa10.74□□□□□ -0.69
COL11A2-204ENST00000395194 LOC107984156A0A0G2JMH3 177 aa10.73□□□□□ -0.69
COL11A2-204ENST00000395194 J3QQQ9 107 aa10.73□□□□□ -0.69
COL11A2-204ENST00000395194 TRGC2P03986 189 aa10.73□□□□□ -0.69
COL11A2-204ENST00000395194 LINC01547P58512 204 aaPredicted RBP10.73□□□□□ -0.69
COL11A2-204ENST00000395194 NPC2P61916 151 aa10.73□□□□□ -0.69
COL11A2-204ENST00000395194 S100A7L2Q5SY68 101 aa10.73□□□□□ -0.69
COL11A2-204ENST00000395194 C9orf153Q5TBE3 101 aa10.73□□□□□ -0.69
COL11A2-204ENST00000395194 SSBP3-AS1Q7Z2R9 100 aa10.73□□□□□ -0.69
COL11A2-204ENST00000395194 ARL17AQ8IVW1 177 aa10.73□□□□□ -0.69
COL11A2-204ENST00000395194 SPANXB1Q9NS25 103 aaPredicted RBP10.73□□□□□ -0.69
COL11A2-204ENST00000395194 COLCA2A8K830 154 aa10.72□□□□□ -0.69
COL11A2-204ENST00000395194 SERF1AO75920 110 aa10.72□□□□□ -0.69
COL11A2-204ENST00000395194 LINC00310P59036 64 aa10.72□□□□□ -0.69
COL11A2-204ENST00000395194 RPS29P62273 56 aaKnown RBP10.71□□□□□ -0.69
COL11A2-204ENST00000395194 SLC25A20O43772 301 aa10.7□□□□□ -0.7
COL11A2-204ENST00000395194 FABP4P15090 132 aa10.7□□□□□ -0.7
COL11A2-204ENST00000395194 LGALS3P17931 250 aaKnown RBP10.7□□□□□ -0.7
COL11A2-204ENST00000395194 PLNP26678 52 aa10.7□□□□□ -0.7
COL11A2-204ENST00000395194 TRAV23DV6A0A075B6W5 121 aa10.69□□□□□ -0.7
COL11A2-204ENST00000395194 DPM2O94777 84 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms