RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 H7C423 109 aa8.53□□□□□ -1.04
PFDN6-204ENST00000395131 PRO1854Q9UHT4 67 aa8.53□□□□□ -1.04
PFDN6-204ENST00000395131 IGHV3-64A0A075B6Q5 118 aa8.52□□□□□ -1.05
PFDN6-204ENST00000395131 GAGE12JA6NER3 117 aa8.52□□□□□ -1.05
PFDN6-204ENST00000395131 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
PFDN6-204ENST00000395131 HERVK_113P63121 156 aa8.52□□□□□ -1.05
PFDN6-204ENST00000395131 GAGE4Q13068 117 aa8.52□□□□□ -1.05
PFDN6-204ENST00000395131 GAGE5Q13069 117 aa8.52□□□□□ -1.05
PFDN6-204ENST00000395131 A0A0B4J2C4 111 aa8.51□□□□□ -1.05
PFDN6-204ENST00000395131 TIMM17BO60830 172 aa8.51□□□□□ -1.05
PFDN6-204ENST00000395131 APOMO95445 188 aa8.51□□□□□ -1.05
PFDN6-204ENST00000395131 GHRHP01286 108 aa8.51□□□□□ -1.05
PFDN6-204ENST00000395131 FAM19A3Q7Z5A8 133 aa8.51□□□□□ -1.05
PFDN6-204ENST00000395131 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
PFDN6-204ENST00000395131 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
PFDN6-204ENST00000395131 IGLV5-45A0A087WSX0 123 aa8.5□□□□□ -1.05
PFDN6-204ENST00000395131 A0A0J9YXY3 114 aa8.5□□□□□ -1.05
PFDN6-204ENST00000395131 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
PFDN6-204ENST00000395131 IFITM1P13164 125 aa8.5□□□□□ -1.05
PFDN6-204ENST00000395131 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
PFDN6-204ENST00000395131 SPANXCQ9NY87 97 aa8.5□□□□□ -1.05
PFDN6-204ENST00000395131 LOC107984156A0A0G2JMH3 177 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 UBE2L6O14933 153 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 TSPAN13O95857 204 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 CFC1BP0CG36 223 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 CFC1P0CG37 223 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 UBE2D3P61077 147 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 UBE2D2P62837 147 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 KRTAP26-1Q6PEX3 210 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 ARL17AQ8IVW1 177 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 Q9UF83 564 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 NDUFA12Q9UI09 145 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 ERG28Q9UKR5 140 aa8.49□□□□□ -1.05
PFDN6-204ENST00000395131 H3BMG7 143 aa8.48□□□□□ -1.05
PFDN6-204ENST00000395131 CRPP02741 224 aa8.48□□□□□ -1.05
PFDN6-204ENST00000395131 SCGB1C2P0DMR2 95 aa8.48□□□□□ -1.05
PFDN6-204ENST00000395131 MIAQ16674 131 aa8.48□□□□□ -1.05
PFDN6-204ENST00000395131 Q6ZUT4 128 aa8.48□□□□□ -1.05
PFDN6-204ENST00000395131 PSMB2P49721 201 aa8.47□□□□□ -1.05
PFDN6-204ENST00000395131 MUSTN1Q8IVN3 82 aa8.47□□□□□ -1.05
PFDN6-204ENST00000395131 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
PFDN6-204ENST00000395131 TMEM243Q9BU79 118 aa8.47□□□□□ -1.05
PFDN6-204ENST00000395131 A4D1N5 150 aa8.46□□□□□ -1.06
PFDN6-204ENST00000395131 NDUFA1O15239 70 aa8.46□□□□□ -1.06
PFDN6-204ENST00000395131 SLPIP03973 132 aa8.46□□□□□ -1.06
PFDN6-204ENST00000395131 M0QXV9 152 aa8.45□□□□□ -1.06
PFDN6-204ENST00000395131 PCP4P48539 62 aa8.45□□□□□ -1.06
PFDN6-204ENST00000395131 PRR4Q16378 134 aa8.45□□□□□ -1.06
PFDN6-204ENST00000395131 PRSS2P07478 247 aa8.44□□□□□ -1.06
PFDN6-204ENST00000395131 COX6CP09669 75 aa8.44□□□□□ -1.06
PFDN6-204ENST00000395131 SPINK8P0C7L1 97 aa8.44□□□□□ -1.06
PFDN6-204ENST00000395131 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
PFDN6-204ENST00000395131 HERV-K104P63124 156 aa8.44□□□□□ -1.06
PFDN6-204ENST00000395131 IGLV5-39A0A0G2JS06 123 aa8.43□□□□□ -1.06
PFDN6-204ENST00000395131 Q1RN00 199 aa8.43□□□□□ -1.06
PFDN6-204ENST00000395131 RNASE13Q5GAN3 156 aaKnown RBP8.43□□□□□ -1.06
PFDN6-204ENST00000395131 Q6ZRP5 223 aa8.43□□□□□ -1.06
PFDN6-204ENST00000395131 PPDPFQ9H3Y8 114 aa8.43□□□□□ -1.06
PFDN6-204ENST00000395131 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
PFDN6-204ENST00000395131 PRR34Q9NV39 138 aa8.43□□□□□ -1.06
PFDN6-204ENST00000395131 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
PFDN6-204ENST00000395131 ATXN8Q156A1 80 aa8.42□□□□□ -1.06
PFDN6-204ENST00000395131 CDKN2A-AS1Q9UH64 79 aa8.42□□□□□ -1.06
PFDN6-204ENST00000395131 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
PFDN6-204ENST00000395131 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
PFDN6-204ENST00000395131 TMEM262E9PQX1 116 aa8.41□□□□□ -1.06
PFDN6-204ENST00000395131 ANGP03950 147 aaKnown RBP8.41□□□□□ -1.06
PFDN6-204ENST00000395131 LINC00242Q5T6M2 205 aa8.41□□□□□ -1.06
PFDN6-204ENST00000395131 LITAFQ99732 161 aa8.41□□□□□ -1.06
PFDN6-204ENST00000395131 COX6A2Q02221 97 aa8.4□□□□□ -1.06
PFDN6-204ENST00000395131 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
PFDN6-204ENST00000395131 SFTA2Q6UW10 78 aa8.4□□□□□ -1.06
PFDN6-204ENST00000395131 NTM-AS1Q6ZSK4 140 aa8.4□□□□□ -1.06
PFDN6-204ENST00000395131 TCL1BO95988 128 aa8.39□□□□□ -1.07
PFDN6-204ENST00000395131 PPDPFLQ8WWR9 84 aa8.39□□□□□ -1.07
PFDN6-204ENST00000395131 TRBV6-8A0A0A6YYG3 113 aa8.38□□□□□ -1.07
PFDN6-204ENST00000395131 TRAV13-1A0A0B4J241 112 aa8.38□□□□□ -1.07
PFDN6-204ENST00000395131 TEN1Q86WV5 123 aa8.38□□□□□ -1.07
PFDN6-204ENST00000395131 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
PFDN6-204ENST00000395131 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
PFDN6-204ENST00000395131 SMIM1B2RUZ4 78 aa8.37□□□□□ -1.07
PFDN6-204ENST00000395131 FOXI1Q12951 378 aa8.37□□□□□ -1.07
PFDN6-204ENST00000395131 SCGB1A1P11684 91 aa8.36□□□□□ -1.07
PFDN6-204ENST00000395131 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
PFDN6-204ENST00000395131 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
PFDN6-204ENST00000395131 CHCHD5Q9BSY4 110 aa8.36□□□□□ -1.07
PFDN6-204ENST00000395131 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
PFDN6-204ENST00000395131 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
PFDN6-204ENST00000395131 H7C2G1 150 aa8.35□□□□□ -1.07
PFDN6-204ENST00000395131 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
PFDN6-204ENST00000395131 SLC25A20O43772 301 aa8.34□□□□□ -1.07
PFDN6-204ENST00000395131 GAGE6Q13070 117 aa8.34□□□□□ -1.07
PFDN6-204ENST00000395131 LINC01561Q8N1V8 128 aa8.34□□□□□ -1.07
PFDN6-204ENST00000395131 LINC00308Q8TCZ7 52 aa8.34□□□□□ -1.07
PFDN6-204ENST00000395131 COX7B2Q8TF08 81 aa8.34□□□□□ -1.07
PFDN6-204ENST00000395131 A0A1B0GUV1 79 aa8.33□□□□□ -1.08
PFDN6-204ENST00000395131 LINC00269Q8N2A0 174 aa8.33□□□□□ -1.08
PFDN6-204ENST00000395131 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
PFDN6-204ENST00000395131 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms