RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TMEM126AQ9H061 195 aa10.79□□□□□ -0.68
SMARCD1-202ENST00000394963 RPL37AP8A6NKH3 93 aa10.79□□□□□ -0.68
SMARCD1-202ENST00000394963 LINC00612Q8N6U2 182 aa10.79□□□□□ -0.68
SMARCD1-202ENST00000394963 Q6ZRU5 148 aa10.78□□□□□ -0.68
SMARCD1-202ENST00000394963 CXCL5P42830 114 aa10.78□□□□□ -0.68
SMARCD1-202ENST00000394963 SYCNQ0VAF6 134 aa10.76□□□□□ -0.69
SMARCD1-202ENST00000394963 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
SMARCD1-202ENST00000394963 FAM19A5Q7Z5A7 132 aaPredicted RBP10.75□□□□□ -0.69
SMARCD1-202ENST00000394963 SS18L2Q9UHA2 77 aa10.75□□□□□ -0.69
SMARCD1-202ENST00000394963 ORMDL1Q9P0S3 153 aa10.75□□□□□ -0.69
SMARCD1-202ENST00000394963 XGP55808 180 aa10.74□□□□□ -0.69
SMARCD1-202ENST00000394963 IGKV3D-7A0A0C4DH55 119 aa10.73□□□□□ -0.69
SMARCD1-202ENST00000394963 TRBV10-3A0A0K0K1G6 114 aa10.73□□□□□ -0.69
SMARCD1-202ENST00000394963 H0YGX0 51 aa10.72□□□□□ -0.69
SMARCD1-202ENST00000394963 H3BT86 120 aa10.72□□□□□ -0.69
SMARCD1-202ENST00000394963 C6orf48Q9UBA6 75 aa10.72□□□□□ -0.69
SMARCD1-202ENST00000394963 LINC00588Q9Y4M8 146 aa10.71□□□□□ -0.69
SMARCD1-202ENST00000394963 Q6ZQY7 126 aa10.71□□□□□ -0.7
SMARCD1-202ENST00000394963 USP17L23D6RBM5 183 aa10.7□□□□□ -0.7
SMARCD1-202ENST00000394963 ANAPC13Q9BS18 74 aa10.7□□□□□ -0.7
SMARCD1-202ENST00000394963 CASC10Q5T4H9 136 aa10.7□□□□□ -0.7
SMARCD1-202ENST00000394963 SCGB1A1P11684 91 aa10.69□□□□□ -0.7
SMARCD1-202ENST00000394963 KIAA0087Q14695 138 aa10.69□□□□□ -0.7
SMARCD1-202ENST00000394963 KLK5Q9Y337 293 aaPredicted RBP10.68□□□□□ -0.7
SMARCD1-202ENST00000394963 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMARCD1-202ENST00000394963 DIRC1Q969H9 104 aa10.68□□□□□ -0.7
SMARCD1-202ENST00000394963 HAMPP81172 84 aa10.68□□□□□ -0.7
SMARCD1-202ENST00000394963 UBE2BP63146 152 aa10.67□□□□□ -0.7
SMARCD1-202ENST00000394963 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
SMARCD1-202ENST00000394963 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
SMARCD1-202ENST00000394963 EGFEM1PQ0D2K5 195 aa10.66□□□□□ -0.7
SMARCD1-202ENST00000394963 hADV29S1A0JD25 119 aa10.65□□□□□ -0.7
SMARCD1-202ENST00000394963 RMI2Q96E14 147 aa10.65□□□□□ -0.7
SMARCD1-202ENST00000394963 A0A096LNI7 61 aa10.65□□□□□ -0.7
SMARCD1-202ENST00000394963 TRAV23DV6A0A075B6W5 121 aa10.64□□□□□ -0.71
SMARCD1-202ENST00000394963 B5MCH6 92 aa10.64□□□□□ -0.71
SMARCD1-202ENST00000394963 TRACP01848 142 aa10.64□□□□□ -0.71
SMARCD1-202ENST00000394963 SVIPQ8NHG7 77 aa10.63□□□□□ -0.71
SMARCD1-202ENST00000394963 ETDCA0A1B0GVM5 59 aa10.62□□□□□ -0.71
SMARCD1-202ENST00000394963 COX7BP24311 80 aa10.62□□□□□ -0.71
SMARCD1-202ENST00000394963 SDIM1Q6ZPB5 146 aa10.62□□□□□ -0.71
SMARCD1-202ENST00000394963 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
SMARCD1-202ENST00000394963 CDIP1Q9H305 208 aa10.61□□□□□ -0.71
SMARCD1-202ENST00000394963 COX17Q14061 63 aa10.61□□□□□ -0.71
SMARCD1-202ENST00000394963 FAM19A3Q7Z5A8 133 aa10.61□□□□□ -0.71
SMARCD1-202ENST00000394963 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
SMARCD1-202ENST00000394963 Q8NDZ9 215 aa10.61□□□□□ -0.71
SMARCD1-202ENST00000394963 FAM168BA1KXE4 195 aa10.6□□□□□ -0.71
SMARCD1-202ENST00000394963 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
SMARCD1-202ENST00000394963 C9orf129Q5T035 196 aaKnown RBP10.6□□□□□ -0.71
SMARCD1-202ENST00000394963 DSCR8Q96T75 97 aa10.6□□□□□ -0.71
SMARCD1-202ENST00000394963 SCXQ7RTU7 201 aa10.6□□□□□ -0.71
SMARCD1-202ENST00000394963 PRR34Q9NV39 138 aa10.6□□□□□ -0.71
SMARCD1-202ENST00000394963 Q6ZRP5 223 aa10.59□□□□□ -0.71
SMARCD1-202ENST00000394963 SMIM20Q8N5G0 67 aa10.59□□□□□ -0.71
SMARCD1-202ENST00000394963 NDUFC2-KCTD14E9PQ53 114 aa10.59□□□□□ -0.71
SMARCD1-202ENST00000394963 Q8N814 137 aa10.58□□□□□ -0.72
SMARCD1-202ENST00000394963 RBM3P98179 157 aaKnown RBP10.56□□□□□ -0.72
SMARCD1-202ENST00000394963 WIPF1O43516 503 aa10.56□□□□□ -0.72
SMARCD1-202ENST00000394963 C15orf56Q8N910 161 aa10.56□□□□□ -0.72
SMARCD1-202ENST00000394963 TMEM256-PLSCR3K7ERE1 68 aa10.56□□□□□ -0.72
SMARCD1-202ENST00000394963 LY6G6CO95867 125 aa10.56□□□□□ -0.72
SMARCD1-202ENST00000394963 FAM236AA0A1B0GUQ0 79 aa10.55□□□□□ -0.72
SMARCD1-202ENST00000394963 FAM236BA0A1B0GV22 79 aa10.55□□□□□ -0.72
SMARCD1-202ENST00000394963 PPDPFQ9H3Y8 114 aa10.55□□□□□ -0.72
SMARCD1-202ENST00000394963 C3orf22Q8N5N4 141 aa10.54□□□□□ -0.72
SMARCD1-202ENST00000394963 CHTF8P0CG12 524 aa10.54□□□□□ -0.72
SMARCD1-202ENST00000394963 TM2D3Q9BRN9 247 aa10.53□□□□□ -0.72
SMARCD1-202ENST00000394963 M0R378 163 aa10.52□□□□□ -0.72
SMARCD1-202ENST00000394963 C3orf84H3BNL1 204 aa10.52□□□□□ -0.73
SMARCD1-202ENST00000394963 UBL5Q9BZL1 73 aa10.51□□□□□ -0.73
SMARCD1-202ENST00000394963 DNAH10OSP0CZ25 163 aa10.51□□□□□ -0.73
SMARCD1-202ENST00000394963 SERTAD4-AS1Q5TG53 156 aa10.51□□□□□ -0.73
SMARCD1-202ENST00000394963 CSMD3Q7Z407 3707 aa10.51□□□□□ -0.73
SMARCD1-202ENST00000394963 A0A087WVE0 104 aa10.51□□□□□ -0.73
SMARCD1-202ENST00000394963 H3BNG1 76 aa10.51□□□□□ -0.73
SMARCD1-202ENST00000394963 FAM19A1Q7Z5A9 133 aa10.5□□□□□ -0.73
SMARCD1-202ENST00000394963 NDUFC2O95298 119 aa10.49□□□□□ -0.73
SMARCD1-202ENST00000394963 C7orf33Q8WU49 177 aa10.48□□□□□ -0.73
SMARCD1-202ENST00000394963 LINC00575Q6W349 94 aa10.48□□□□□ -0.73
SMARCD1-202ENST00000394963 PRLHP81277 87 aa10.47□□□□□ -0.73
SMARCD1-202ENST00000394963 LINC00846Q9NV44 126 aa10.47□□□□□ -0.73
SMARCD1-202ENST00000394963 JMJD7-PLA2G4BH0Y9G9 81 aa10.46□□□□□ -0.73
SMARCD1-202ENST00000394963 LINC01561Q8N1V8 128 aa10.46□□□□□ -0.73
SMARCD1-202ENST00000394963 M0QXV9 152 aa10.45□□□□□ -0.74
SMARCD1-202ENST00000394963 C22orf24Q9Y442 160 aa10.44□□□□□ -0.74
SMARCD1-202ENST00000394963 CCKP06307 115 aa10.44□□□□□ -0.74
SMARCD1-202ENST00000394963 VPREB1P12018 145 aa10.44□□□□□ -0.74
SMARCD1-202ENST00000394963 C2orf48Q96LS8 159 aa10.44□□□□□ -0.74
SMARCD1-202ENST00000394963 F8WEM9 126 aa10.43□□□□□ -0.74
SMARCD1-202ENST00000394963 LINC00167Q96N53 147 aa10.43□□□□□ -0.74
SMARCD1-202ENST00000394963 UBE2AP49459 152 aa10.42□□□□□ -0.74
SMARCD1-202ENST00000394963 LOC107984640A0A0U1RRK4 108 aa10.42□□□□□ -0.74
SMARCD1-202ENST00000394963 ACYP1P07311 99 aa10.42□□□□□ -0.74
SMARCD1-202ENST00000394963 LINC00643Q86TS7 51 aa10.42□□□□□ -0.74
SMARCD1-202ENST00000394963 NDUFV3P56181 108 aaKnown RBP10.41□□□□□ -0.74
SMARCD1-202ENST00000394963 KRTAP1-5Q9BYS1 174 aa10.41□□□□□ -0.74
SMARCD1-202ENST00000394963 GHRHP01286 108 aa10.41□□□□□ -0.74
SMARCD1-202ENST00000394963 B9D2Q9BPU9 175 aa10.41□□□□□ -0.74
SMARCD1-202ENST00000394963 A0A0G2JQZ4 141 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms