RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 PLAC8Q9NZF1 115 aa12.27□□□□□ -0.45
PSEN1-203ENST00000394157 A0A087WYN8 130 aa12.26□□□□□ -0.45
PSEN1-203ENST00000394157 A0A0U1RRA0 63 aa12.26□□□□□ -0.45
PSEN1-203ENST00000394157 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
PSEN1-203ENST00000394157 DNAH8Q96JB1 4490 aa12.25□□□□□ -0.45
PSEN1-203ENST00000394157 EPM2AB3EWF7 344 aa12.25□□□□□ -0.45
PSEN1-203ENST00000394157 SCXQ7RTU7 201 aa12.25□□□□□ -0.45
PSEN1-203ENST00000394157 CIRBP-AS1Q8TBR5 109 aa12.25□□□□□ -0.45
PSEN1-203ENST00000394157 PLA2G2DQ9UNK4 145 aa12.25□□□□□ -0.45
PSEN1-203ENST00000394157 LOC107984156A0A0G2JMH3 177 aa12.24□□□□□ -0.45
PSEN1-203ENST00000394157 ARL17AQ8IVW1 177 aa12.24□□□□□ -0.45
PSEN1-203ENST00000394157 LITAFQ99732 161 aa12.24□□□□□ -0.45
PSEN1-203ENST00000394157 XGP55808 180 aa12.23□□□□□ -0.45
PSEN1-203ENST00000394157 Q6ZVH6 145 aa12.23□□□□□ -0.45
PSEN1-203ENST00000394157 ADAMTSL4-AS1Q5T5F5 129 aa12.22□□□□□ -0.45
PSEN1-203ENST00000394157 SLC25A34Q6PIV7 304 aa12.22□□□□□ -0.45
PSEN1-203ENST00000394157 A0A1W2PNN7 141 aa12.21□□□□□ -0.45
PSEN1-203ENST00000394157 RPL24P83731 157 aaKnown RBP12.21□□□□□ -0.45
PSEN1-203ENST00000394157 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
PSEN1-203ENST00000394157 C14orf144Q96I85 54 aa12.21□□□□□ -0.45
PSEN1-203ENST00000394157 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.45
PSEN1-203ENST00000394157 SPANXDQ9BXN6 97 aa12.21□□□□□ -0.45
PSEN1-203ENST00000394157 SPANXCQ9NY87 97 aa12.21□□□□□ -0.45
PSEN1-203ENST00000394157 DAND5Q8N907 189 aa12.2□□□□□ -0.46
PSEN1-203ENST00000394157 IGLV5-37A0A075B6J1 123 aa12.19□□□□□ -0.46
PSEN1-203ENST00000394157 FAM168BA1KXE4 195 aa12.19□□□□□ -0.46
PSEN1-203ENST00000394157 PPDPFQ9H3Y8 114 aa12.19□□□□□ -0.46
PSEN1-203ENST00000394157 IFITM1P13164 125 aa12.18□□□□□ -0.46
PSEN1-203ENST00000394157 FAM19A5Q7Z5A7 132 aaPredicted RBP12.18□□□□□ -0.46
PSEN1-203ENST00000394157 SPANXB1Q9NS25 103 aaPredicted RBP12.18□□□□□ -0.46
PSEN1-203ENST00000394157 TP73-AS1Q9UF72 201 aa12.18□□□□□ -0.46
PSEN1-203ENST00000394157 LINC00308Q8TCZ7 52 aa12.17□□□□□ -0.46
PSEN1-203ENST00000394157 HIGD1BQ9P298 99 aa12.17□□□□□ -0.46
PSEN1-203ENST00000394157 APOBP04114 4563 aaKnown RBP12.16□□□□□ -0.46
PSEN1-203ENST00000394157 SERTAD4-AS1Q5TG53 156 aa12.16□□□□□ -0.46
PSEN1-203ENST00000394157 KRTAP7-1Q8IUC3 87 aa12.16□□□□□ -0.46
PSEN1-203ENST00000394157 NKAPP1Q8N9T2 125 aa12.16□□□□□ -0.46
PSEN1-203ENST00000394157 M0QXV9 152 aa12.15□□□□□ -0.46
PSEN1-203ENST00000394157 VPREB1P12018 145 aa12.15□□□□□ -0.46
PSEN1-203ENST00000394157 HAMPP81172 84 aa12.15□□□□□ -0.46
PSEN1-203ENST00000394157 LBHQ53QV2 105 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-203ENST00000394157 NDUFC2O95298 119 aa12.14□□□□□ -0.47
PSEN1-203ENST00000394157 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.47
PSEN1-203ENST00000394157 C22orf24Q9Y442 160 aa12.14□□□□□ -0.47
PSEN1-203ENST00000394157 SOSTDC1Q6X4U4 206 aa12.13□□□□□ -0.47
PSEN1-203ENST00000394157 C7orf33Q8WU49 177 aa12.13□□□□□ -0.47
PSEN1-203ENST00000394157 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
PSEN1-203ENST00000394157 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
PSEN1-203ENST00000394157 NPC2P61916 151 aa12.11□□□□□ -0.47
PSEN1-203ENST00000394157 C12orf57Q99622 126 aa12.11□□□□□ -0.47
PSEN1-203ENST00000394157 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
PSEN1-203ENST00000394157 PHF5AQ7RTV0 110 aaKnown RBP12.1□□□□□ -0.47
PSEN1-203ENST00000394157 M0R378 163 aa12.09□□□□□ -0.47
PSEN1-203ENST00000394157 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
PSEN1-203ENST00000394157 C2orf91Q6ZV80 131 aa12.09□□□□□ -0.47
PSEN1-203ENST00000394157 MUSTN1Q8IVN3 82 aa12.09□□□□□ -0.47
PSEN1-203ENST00000394157 Q8NDZ9 215 aa12.09□□□□□ -0.47
PSEN1-203ENST00000394157 HIST1H4GQ99525 98 aa12.09□□□□□ -0.47
PSEN1-203ENST00000394157 RYR1P21817 5038 aa12.09□□□□□ -0.47
PSEN1-203ENST00000394157 TAL2Q16559 108 aa12.08□□□□□ -0.48
PSEN1-203ENST00000394157 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
PSEN1-203ENST00000394157 LINC00518Q8N0U6 118 aa12.07□□□□□ -0.48
PSEN1-203ENST00000394157 LINC00167Q96N53 147 aa12.07□□□□□ -0.48
PSEN1-203ENST00000394157 UBE2BP63146 152 aa12.06□□□□□ -0.48
PSEN1-203ENST00000394157 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
PSEN1-203ENST00000394157 NCR3O14931 201 aa12.04□□□□□ -0.48
PSEN1-203ENST00000394157 PRR3P79522 188 aaKnown RBP12.04□□□□□ -0.48
PSEN1-203ENST00000394157 PRO1933Q9H354 126 aa12.03□□□□□ -0.48
PSEN1-203ENST00000394157 IGLV1-50A0A075B6I6 118 aa12.02□□□□□ -0.49
PSEN1-203ENST00000394157 GAGE10A6NGK3 116 aa12.02□□□□□ -0.49
PSEN1-203ENST00000394157 TSTD3H0UI37 97 aa12.02□□□□□ -0.49
PSEN1-203ENST00000394157 Q8N1X5 172 aa12.02□□□□□ -0.49
PSEN1-203ENST00000394157 HSPG2P98160 4391 aa12.02□□□□□ -0.49
PSEN1-203ENST00000394157 HNRNPA3P51991 378 aaKnown RBP12.01□□□□□ -0.49
PSEN1-203ENST00000394157 CBY1Q9Y3M2 126 aa12.01□□□□□ -0.49
PSEN1-203ENST00000394157 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
PSEN1-203ENST00000394157 RPL37AP8A6NKH3 93 aa12□□□□□ -0.49
PSEN1-203ENST00000394157 IGKV2D-28P01615 120 aa12□□□□□ -0.49
PSEN1-203ENST00000394157 PLA2G1BP04054 148 aaKnown RBP12□□□□□ -0.49
PSEN1-203ENST00000394157 RPL37AP61513 92 aaKnown RBP12□□□□□ -0.49
PSEN1-203ENST00000394157 HSD52Q0P140 79 aa12□□□□□ -0.49
PSEN1-203ENST00000394157 S100A7L2Q5SY68 101 aa12□□□□□ -0.49
PSEN1-203ENST00000394157 A4D1N5 150 aa11.99□□□□□ -0.49
PSEN1-203ENST00000394157 DDTP30046 118 aa11.99□□□□□ -0.49
PSEN1-203ENST00000394157 CEND1Q8N111 149 aa11.99□□□□□ -0.49
PSEN1-203ENST00000394157 PSORS1C2Q9UIG4 136 aa11.99□□□□□ -0.49
PSEN1-203ENST00000394157 IGLV6-57P01721 117 aa11.98□□□□□ -0.49
PSEN1-203ENST00000394157 TMEM126AQ9H061 195 aa11.98□□□□□ -0.49
PSEN1-203ENST00000394157 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
PSEN1-203ENST00000394157 KRTAP11-1Q8IUC1 163 aa11.97□□□□□ -0.49
PSEN1-203ENST00000394157 KCNQ1DNQ9H478 68 aa11.97□□□□□ -0.49
PSEN1-203ENST00000394157 TRAV13-2A0A0B4J235 113 aa11.96□□□□□ -0.49
PSEN1-203ENST00000394157 TMEM238LA0A1B0GVL6 79 aa11.96□□□□□ -0.49
PSEN1-203ENST00000394157 PRYO14603 147 aa11.96□□□□□ -0.49
PSEN1-203ENST00000394157 Q5VSD8 79 aa11.96□□□□□ -0.49
PSEN1-203ENST00000394157 LINC00337Q8N6G1 96 aa11.95□□□□□ -0.5
PSEN1-203ENST00000394157 OR13C6PQ8NH95 151 aa11.95□□□□□ -0.5
PSEN1-203ENST00000394157 C1orf137Q5JT78 98 aa11.94□□□□□ -0.5
PSEN1-203ENST00000394157 REG3GQ6UW15 175 aa11.94□□□□□ -0.5
PSEN1-203ENST00000394157 PCLOQ9Y6V0 5065 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms