RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 GAGE2EQ4V326 116 aa5.67□□□□□ -1.5
TDP1-203ENST00000393454 LINC00337Q8N6G1 96 aa5.67□□□□□ -1.5
TDP1-203ENST00000393454 GAGE2DQ9UEU5 116 aa5.67□□□□□ -1.5
TDP1-203ENST00000393454 TRIAP1O43715 76 aa5.67□□□□□ -1.5
TDP1-203ENST00000393454 COX6CP09669 75 aa5.67□□□□□ -1.5
TDP1-203ENST00000393454 NDUFC2-KCTD14E9PQ53 114 aa5.66□□□□□ -1.5
TDP1-203ENST00000393454 H3BMG7 143 aa5.66□□□□□ -1.5
TDP1-203ENST00000393454 SLPIP03973 132 aa5.66□□□□□ -1.5
TDP1-203ENST00000393454 WFDC2Q14508 124 aa5.66□□□□□ -1.5
TDP1-203ENST00000393454 VPS13DQ5THJ4 4388 aa5.66□□□□□ -1.5
TDP1-203ENST00000393454 NCR3O14931 201 aa5.65□□□□□ -1.5
TDP1-203ENST00000393454 NDUFC2O95298 119 aa5.65□□□□□ -1.5
TDP1-203ENST00000393454 TCL1BO95988 128 aa5.65□□□□□ -1.5
TDP1-203ENST00000393454 LY6G6CO95867 125 aa5.65□□□□□ -1.51
TDP1-203ENST00000393454 RPL18AQ02543 176 aaKnown RBP5.65□□□□□ -1.51
TDP1-203ENST00000393454 TRBV20-1A0A075B6N2 111 aa5.64□□□□□ -1.51
TDP1-203ENST00000393454 Q6ZRP5 223 aa5.64□□□□□ -1.51
TDP1-203ENST00000393454 Q8NDZ9 215 aa5.64□□□□□ -1.51
TDP1-203ENST00000393454 DNAH10Q8IVF4 4471 aa5.64□□□□□ -1.51
TDP1-203ENST00000393454 RNF151Q2KHN1 245 aa5.63□□□□□ -1.51
TDP1-203ENST00000393454 C14orf177Q52M58 125 aa5.63□□□□□ -1.51
TDP1-203ENST00000393454 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
TDP1-203ENST00000393454 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.63□□□□□ -1.51
TDP1-203ENST00000393454 ATXN8Q156A1 80 aa5.63□□□□□ -1.51
TDP1-203ENST00000393454 SMIM11BQ8TCY0 68 aa5.63□□□□□ -1.51
TDP1-203ENST00000393454 CLEC2BQ92478 149 aa5.63□□□□□ -1.51
TDP1-203ENST00000393454 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
TDP1-203ENST00000393454 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
TDP1-203ENST00000393454 RPL28P46779 137 aaKnown RBP5.62□□□□□ -1.51
TDP1-203ENST00000393454 MTURNQ8N3F0 131 aa5.62□□□□□ -1.51
TDP1-203ENST00000393454 GAGE2BQ13066 116 aa5.62□□□□□ -1.51
TDP1-203ENST00000393454 TMEM126AQ9H061 195 aa5.62□□□□□ -1.51
TDP1-203ENST00000393454 LOC107984640A0A0U1RRK4 108 aa5.61□□□□□ -1.51
TDP1-203ENST00000393454 C3orf84H3BNL1 204 aa5.61□□□□□ -1.51
TDP1-203ENST00000393454 TLX1NBP0CAT3 122 aa5.61□□□□□ -1.51
TDP1-203ENST00000393454 Q6ZRN7 208 aaPredicted RBP5.61□□□□□ -1.51
TDP1-203ENST00000393454 C9orf129Q5T035 196 aaKnown RBP5.6□□□□□ -1.51
TDP1-203ENST00000393454 TRBV10-2A0A0K0K1G8 114 aa5.6□□□□□ -1.51
TDP1-203ENST00000393454 LRCOL1A6NCL2 159 aa5.6□□□□□ -1.51
TDP1-203ENST00000393454 F8W1H4 67 aa5.6□□□□□ -1.51
TDP1-203ENST00000393454 VPREB1P12018 145 aa5.6□□□□□ -1.51
TDP1-203ENST00000393454 Q6ZR54 194 aa5.6□□□□□ -1.51
TDP1-203ENST00000393454 LINC00476Q8WZB0 136 aa5.6□□□□□ -1.51
TDP1-203ENST00000393454 C9JAW5 83 aa5.59□□□□□ -1.51
TDP1-203ENST00000393454 CNBPP62633 177 aaKnown RBP5.59□□□□□ -1.51
TDP1-203ENST00000393454 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
TDP1-203ENST00000393454 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.52
TDP1-203ENST00000393454 M0R378 163 aa5.59□□□□□ -1.52
TDP1-203ENST00000393454 LST1O00453 97 aa5.59□□□□□ -1.52
TDP1-203ENST00000393454 LINC01620Q4KN68 170 aa5.59□□□□□ -1.52
TDP1-203ENST00000393454 C1orf134Q5TEV5 83 aa5.58□□□□□ -1.52
TDP1-203ENST00000393454 IGKV2-24A0A0C4DH68 120 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 H0YGX0 51 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 IGLV6-57P01721 117 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 SERTAD4-AS1Q5TG53 156 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 FAM168BA1KXE4 195 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 SLC25A20O43772 301 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 C6orf99Q4VX62 202 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 Q8N814 137 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 FAM218AQ96MZ4 157 aa5.57□□□□□ -1.52
TDP1-203ENST00000393454 TRAV23DV6A0A075B6W5 121 aa5.56□□□□□ -1.52
TDP1-203ENST00000393454 A0A087WTM6 91 aa5.56□□□□□ -1.52
TDP1-203ENST00000393454 SMCPP49901 116 aaPredicted RBP5.56□□□□□ -1.52
TDP1-203ENST00000393454 A0A096LNI7 61 aa5.55□□□□□ -1.52
TDP1-203ENST00000393454 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
TDP1-203ENST00000393454 PLA2G2DQ9UNK4 145 aa5.55□□□□□ -1.52
TDP1-203ENST00000393454 A0A087WYN8 130 aa5.55□□□□□ -1.52
TDP1-203ENST00000393454 C16orf90A8MZG2 172 aa5.55□□□□□ -1.52
TDP1-203ENST00000393454 TRACP01848 142 aa5.55□□□□□ -1.52
TDP1-203ENST00000393454 ETDBQ3ZM63 59 aa5.55□□□□□ -1.52
TDP1-203ENST00000393454 DNAL4O96015 105 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 C9orf163Q8N9P6 203 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 C7orf33Q8WU49 177 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 KMT2AQ03164 3969 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 ALMS1Q8TCU4 4167 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 ZNF73O43830 326 aaPredicted RBP5.54□□□□□ -1.52
TDP1-203ENST00000393454 ANKRD29Q8N6D5 301 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 DIRC1Q969H9 104 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 PKIGQ9Y2B9 76 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 CBY1Q9Y3M2 126 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 C22orf24Q9Y442 160 aa5.54□□□□□ -1.52
TDP1-203ENST00000393454 RPL37AP8A6NKH3 93 aa5.53□□□□□ -1.52
TDP1-203ENST00000393454 SNCGO76070 127 aa5.53□□□□□ -1.52
TDP1-203ENST00000393454 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
TDP1-203ENST00000393454 CHTF8P0CG12 524 aa5.52□□□□□ -1.53
TDP1-203ENST00000393454 FUSP35637 526 aaKnown RBP eCLIP5.52□□□□□ -1.53
TDP1-203ENST00000393454 DPH3Q96FX2 82 aa5.52□□□□□ -1.53
TDP1-203ENST00000393454 LINC00167Q96N53 147 aa5.52□□□□□ -1.53
TDP1-203ENST00000393454 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
TDP1-203ENST00000393454 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
TDP1-203ENST00000393454 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
TDP1-203ENST00000393454 A0A1W2PNN7 141 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 H3BT86 120 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 RTL8CO15255 209 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 COX7BP24311 80 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 OCIAD2Q56VL3 154 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 SDIM1Q6ZPB5 146 aa5.51□□□□□ -1.53
TDP1-203ENST00000393454 DNAH6Q9C0G6 4158 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms