RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 OBSCN-AS1Q96MR7 158 aa11.26□□□□□ -0.61
PHTF1-205ENST00000393357 ITPR2Q14571 2701 aa11.26□□□□□ -0.61
PHTF1-205ENST00000393357 CHCHD10Q8WYQ3 142 aaPredicted RBP11.26□□□□□ -0.61
PHTF1-205ENST00000393357 BAHCC1Q9P281 2608 aa11.26□□□□□ -0.61
PHTF1-205ENST00000393357 LRCOL1A6NCL2 159 aa11.26□□□□□ -0.61
PHTF1-205ENST00000393357 LINC01547P58512 204 aaPredicted RBP11.26□□□□□ -0.61
PHTF1-205ENST00000393357 TRAV25A0A0B4J276 109 aa11.25□□□□□ -0.61
PHTF1-205ENST00000393357 TM2D3Q9BRN9 247 aa11.25□□□□□ -0.61
PHTF1-205ENST00000393357 LINC00482Q8N8I6 264 aa11.25□□□□□ -0.61
PHTF1-205ENST00000393357 Q6ZVQ6 151 aa11.24□□□□□ -0.61
PHTF1-205ENST00000393357 FAM19A3Q7Z5A8 133 aa11.24□□□□□ -0.61
PHTF1-205ENST00000393357 IGHV4-28A0A0C4DH34 117 aa11.24□□□□□ -0.61
PHTF1-205ENST00000393357 PKD1L1Q8TDX9 2849 aa11.23□□□□□ -0.61
PHTF1-205ENST00000393357 BRK1Q8WUW1 75 aa11.22□□□□□ -0.61
PHTF1-205ENST00000393357 DEFB105AQ8NG35 78 aa11.22□□□□□ -0.61
PHTF1-205ENST00000393357 IL17DQ8TAD2 202 aa11.22□□□□□ -0.61
PHTF1-205ENST00000393357 H7BZZ5 65 aa11.21□□□□□ -0.62
PHTF1-205ENST00000393357 MRAPQ8TCY5 172 aa11.21□□□□□ -0.62
PHTF1-205ENST00000393357 REG3AQ06141 175 aa11.2□□□□□ -0.62
PHTF1-205ENST00000393357 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
PHTF1-205ENST00000393357 FASNP49327 2511 aaKnown RBP11.19□□□□□ -0.62
PHTF1-205ENST00000393357 C3orf84H3BNL1 204 aa11.19□□□□□ -0.62
PHTF1-205ENST00000393357 NDUFC2O95298 119 aa11.19□□□□□ -0.62
PHTF1-205ENST00000393357 DNAJC9-AS1A6NH13 148 aa11.19□□□□□ -0.62
PHTF1-205ENST00000393357 HIGD2BQ4VC39 106 aa11.19□□□□□ -0.62
PHTF1-205ENST00000393357 SPAG11BQ08648 103 aa11.18□□□□□ -0.62
PHTF1-205ENST00000393357 DEFB135Q30KP9 77 aa11.18□□□□□ -0.62
PHTF1-205ENST00000393357 LINC00575Q6W349 94 aa11.18□□□□□ -0.62
PHTF1-205ENST00000393357 Q6ZQT0 140 aa11.18□□□□□ -0.62
PHTF1-205ENST00000393357 Q8IZM0 81 aa11.18□□□□□ -0.62
PHTF1-205ENST00000393357 TRBV10-3A0A0K0K1G6 114 aa11.18□□□□□ -0.62
PHTF1-205ENST00000393357 LYPD5Q6UWN5 251 aa11.17□□□□□ -0.62
PHTF1-205ENST00000393357 LY6G6DO95868 133 aa11.16□□□□□ -0.62
PHTF1-205ENST00000393357 CYSRT1A8MQ03 144 aa11.16□□□□□ -0.62
PHTF1-205ENST00000393357 J3QLI3 93 aa11.16□□□□□ -0.62
PHTF1-205ENST00000393357 HECTD1Q9ULT8 2610 aa11.15□□□□□ -0.63
PHTF1-205ENST00000393357 BPY2O14599 106 aa11.14□□□□□ -0.63
PHTF1-205ENST00000393357 CELA1Q9UNI1 258 aa11.14□□□□□ -0.63
PHTF1-205ENST00000393357 DSCR9P59020 149 aa11.14□□□□□ -0.63
PHTF1-205ENST00000393357 TRAV7A0A075B6U4 112 aa11.13□□□□□ -0.63
PHTF1-205ENST00000393357 KIAA0087Q14695 138 aa11.13□□□□□ -0.63
PHTF1-205ENST00000393357 PRR4Q16378 134 aa11.13□□□□□ -0.63
PHTF1-205ENST00000393357 ZNF561-AS1K7EIQ3 104 aa11.13□□□□□ -0.63
PHTF1-205ENST00000393357 ATP5EP2Q5VTU8 51 aa11.11□□□□□ -0.63
PHTF1-205ENST00000393357 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
PHTF1-205ENST00000393357 TENM1Q9UKZ4 2725 aa11.11□□□□□ -0.63
PHTF1-205ENST00000393357 CSNK1G2-AS1Q8NCQ2 148 aa11.11□□□□□ -0.63
PHTF1-205ENST00000393357 MUC7Q8TAX7 377 aa11.11□□□□□ -0.63
PHTF1-205ENST00000393357 PRO0255Q9UI72 69 aa11.11□□□□□ -0.63
PHTF1-205ENST00000393357 TRBV7-6A0A0J9YX20 115 aa11.1□□□□□ -0.63
PHTF1-205ENST00000393357 FP248Q71RG6 208 aaPredicted RBP11.1□□□□□ -0.63
PHTF1-205ENST00000393357 SERP1Q9Y6X1 66 aa11.09□□□□□ -0.63
PHTF1-205ENST00000393357 FAM229BQ4G0N7 80 aa11.08□□□□□ -0.64
PHTF1-205ENST00000393357 NREPQ16612 68 aa11.07□□□□□ -0.64
PHTF1-205ENST00000393357 MIFP14174 115 aa11.07□□□□□ -0.64
PHTF1-205ENST00000393357 DIRC1Q969H9 104 aa11.07□□□□□ -0.64
PHTF1-205ENST00000393357 HELZ2Q9BYK8 2649 aaKnown RBP11.06□□□□□ -0.64
PHTF1-205ENST00000393357 C19orf73Q9NVV2 129 aa11.06□□□□□ -0.64
PHTF1-205ENST00000393357 FAM30AQ9NZY2 134 aa11.05□□□□□ -0.64
PHTF1-205ENST00000393357 LINC00167Q96N53 147 aa11.04□□□□□ -0.64
PHTF1-205ENST00000393357 HIGD2AQ9BW72 106 aa11.04□□□□□ -0.64
PHTF1-205ENST00000393357 ZNF73O43830 326 aaPredicted RBP11.03□□□□□ -0.64
PHTF1-205ENST00000393357 FSHBP01225 129 aa11.03□□□□□ -0.64
PHTF1-205ENST00000393357 IGLV1-51P01701 117 aa11.03□□□□□ -0.64
PHTF1-205ENST00000393357 DEFB113Q30KQ7 82 aa11.03□□□□□ -0.64
PHTF1-205ENST00000393357 TMEM254Q8TBM7 123 aa11.03□□□□□ -0.64
PHTF1-205ENST00000393357 TRRAPQ9Y4A5 3859 aa11.03□□□□□ -0.64
PHTF1-205ENST00000393357 COX7BP24311 80 aa11.03□□□□□ -0.64
PHTF1-205ENST00000393357 A0A1B0GUV1 79 aa11.01□□□□□ -0.65
PHTF1-205ENST00000393357 SMIM26A0A096LP01 95 aa11□□□□□ -0.65
PHTF1-205ENST00000393357 NDUFC2-KCTD14E9PQ53 114 aa11□□□□□ -0.65
PHTF1-205ENST00000393357 CAMK2N2Q96S95 79 aa11□□□□□ -0.65
PHTF1-205ENST00000393357 PRO0628Q9UI54 55 aa11□□□□□ -0.65
PHTF1-205ENST00000393357 SMR3AQ99954 134 aa10.99□□□□□ -0.65
PHTF1-205ENST00000393357 C6orf48Q9UBA6 75 aa10.99□□□□□ -0.65
PHTF1-205ENST00000393357 NOTCH1P46531 2555 aa10.99□□□□□ -0.65
PHTF1-205ENST00000393357 KLKP1Q107X0 134 aa10.98□□□□□ -0.65
PHTF1-205ENST00000393357 X6R8D5 127 aa10.98□□□□□ -0.65
PHTF1-205ENST00000393357 WIPF1O43516 503 aa10.98□□□□□ -0.65
PHTF1-205ENST00000393357 COX17Q14061 63 aa10.98□□□□□ -0.65
PHTF1-205ENST00000393357 A0A0G2JQZ4 141 aa10.97□□□□□ -0.65
PHTF1-205ENST00000393357 A0A1W2PNN7 141 aa10.97□□□□□ -0.65
PHTF1-205ENST00000393357 DEFB116Q30KQ4 102 aa10.96□□□□□ -0.66
PHTF1-205ENST00000393357 MAST4O15021 2626 aa10.96□□□□□ -0.66
PHTF1-205ENST00000393357 RPL37AP8A6NKH3 93 aa10.96□□□□□ -0.66
PHTF1-205ENST00000393357 LOC110117498A0A087WWA1 95 aa10.95□□□□□ -0.66
PHTF1-205ENST00000393357 NBEAL1Q6ZS30 2694 aa10.95□□□□□ -0.66
PHTF1-205ENST00000393357 IGLV6-57P01721 117 aa10.94□□□□□ -0.66
PHTF1-205ENST00000393357 FLNBO75369 2602 aaKnown RBP10.94□□□□□ -0.66
PHTF1-205ENST00000393357 FUSP35637 526 aaKnown RBP eCLIP10.94□□□□□ -0.66
PHTF1-205ENST00000393357 C16orf95Q9H693 158 aa10.93□□□□□ -0.66
PHTF1-205ENST00000393357 COL6A5A8TX70 2615 aa10.92□□□□□ -0.66
PHTF1-205ENST00000393357 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
PHTF1-205ENST00000393357 PSPHP1O15172 72 aa10.92□□□□□ -0.66
PHTF1-205ENST00000393357 SMIM29Q86T20 159 aa10.91□□□□□ -0.66
PHTF1-205ENST00000393357 CXCL6P80162 114 aa10.91□□□□□ -0.66
PHTF1-205ENST00000393357 Q6ZRU5 148 aa10.91□□□□□ -0.66
PHTF1-205ENST00000393357 WFDC10BQ8IUB3 73 aa10.91□□□□□ -0.66
PHTF1-205ENST00000393357 PRYO14603 147 aa10.9□□□□□ -0.67
PHTF1-205ENST00000393357 CMC4P56277 68 aaPredicted RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms