RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ZNF561-AS1K7EIQ3 104 aa17.08■□□□□ 0.32
SMARCD3-203ENST00000392811 MRAPQ8TCY5 172 aa17.06■□□□□ 0.32
SMARCD3-203ENST00000392811 TRAV10A0A0B4J240 114 aa17.06■□□□□ 0.32
SMARCD3-203ENST00000392811 C15orf56Q8N910 161 aa17.06■□□□□ 0.32
SMARCD3-203ENST00000392811 C15orf53Q8NAA6 179 aa17.06■□□□□ 0.32
SMARCD3-203ENST00000392811 S100A7L2Q5SY68 101 aa17.05■□□□□ 0.32
SMARCD3-203ENST00000392811 C1orf43Q9BWL3 253 aa17.05■□□□□ 0.32
SMARCD3-203ENST00000392811 CAMK2N2Q96S95 79 aa17.04■□□□□ 0.32
SMARCD3-203ENST00000392811 SLPIP03973 132 aa17.03■□□□□ 0.32
SMARCD3-203ENST00000392811 NBEAL1Q6ZS30 2694 aa17.02■□□□□ 0.31
SMARCD3-203ENST00000392811 IGKV2D-24A0A075B6R9 120 aa17.01■□□□□ 0.31
SMARCD3-203ENST00000392811 XAGE1AQ9HD64 81 aa17.01■□□□□ 0.31
SMARCD3-203ENST00000392811 SNCGO76070 127 aa17.01■□□□□ 0.31
SMARCD3-203ENST00000392811 DNAH10OSP0CZ25 163 aa17.01■□□□□ 0.31
SMARCD3-203ENST00000392811 C6orf99Q4VX62 202 aa17.01■□□□□ 0.31
SMARCD3-203ENST00000392811 RPL18AQ02543 176 aaKnown RBP17■□□□□ 0.31
SMARCD3-203ENST00000392811 INAFM2P0DMQ5 153 aa16.99■□□□□ 0.31
SMARCD3-203ENST00000392811 Q6ZRU5 148 aa16.99■□□□□ 0.31
SMARCD3-203ENST00000392811 C9orf129Q5T035 196 aaKnown RBP16.99■□□□□ 0.31
SMARCD3-203ENST00000392811 LINC00167Q96N53 147 aa16.99■□□□□ 0.31
SMARCD3-203ENST00000392811 A0A1B0GX51 115 aa16.98■□□□□ 0.31
SMARCD3-203ENST00000392811 Q8N814 137 aa16.98■□□□□ 0.31
SMARCD3-203ENST00000392811 ORMDL1Q9P0S3 153 aa16.98■□□□□ 0.31
SMARCD3-203ENST00000392811 IGLV6-57P01721 117 aa16.97■□□□□ 0.31
SMARCD3-203ENST00000392811 ACYP1P07311 99 aa16.97■□□□□ 0.31
SMARCD3-203ENST00000392811 C2orf48Q96LS8 159 aa16.97■□□□□ 0.31
SMARCD3-203ENST00000392811 LINC00588Q9Y4M8 146 aa16.96■□□□□ 0.31
SMARCD3-203ENST00000392811 TTC32Q5I0X7 151 aa16.96■□□□□ 0.3
SMARCD3-203ENST00000392811 OBSCN-AS1Q96MR7 158 aa16.94■□□□□ 0.3
SMARCD3-203ENST00000392811 HUWE1Q7Z6Z7 4374 aaKnown RBP16.93■□□□□ 0.3
SMARCD3-203ENST00000392811 C14orf132Q9NPU4 83 aa16.91■□□□□ 0.3
SMARCD3-203ENST00000392811 TRBV10-3A0A0K0K1G6 114 aa16.9■□□□□ 0.3
SMARCD3-203ENST00000392811 NDUFC2-KCTD14E9PQ53 114 aa16.9■□□□□ 0.3
SMARCD3-203ENST00000392811 GAGE2BQ13066 116 aa16.9■□□□□ 0.3
SMARCD3-203ENST00000392811 GAGE2EQ4V326 116 aa16.9■□□□□ 0.3
SMARCD3-203ENST00000392811 GAGE2AQ6NT46 116 aa16.9■□□□□ 0.3
SMARCD3-203ENST00000392811 LINC00575Q6W349 94 aa16.9■□□□□ 0.3
SMARCD3-203ENST00000392811 GAGE2DQ9UEU5 116 aa16.9■□□□□ 0.3
SMARCD3-203ENST00000392811 F8WDY8 70 aa16.87■□□□□ 0.29
SMARCD3-203ENST00000392811 VPREB1P12018 145 aa16.87■□□□□ 0.29
SMARCD3-203ENST00000392811 SMCR5Q8TEV8 140 aa16.87■□□□□ 0.29
SMARCD3-203ENST00000392811 SYCNQ0VAF6 134 aa16.86■□□□□ 0.29
SMARCD3-203ENST00000392811 TRAV23DV6A0A075B6W5 121 aa16.85■□□□□ 0.29
SMARCD3-203ENST00000392811 Q6Q795 121 aa16.84■□□□□ 0.29
SMARCD3-203ENST00000392811 Q6ZRP5 223 aa16.84■□□□□ 0.29
SMARCD3-203ENST00000392811 MGAM2Q2M2H8 2515 aa16.83■□□□□ 0.29
SMARCD3-203ENST00000392811 A0A1B0GV72 72 aa16.83■□□□□ 0.28
SMARCD3-203ENST00000392811 TMEM256-PLSCR3K7ERE1 68 aa16.83■□□□□ 0.28
SMARCD3-203ENST00000392811 SDIM1Q6ZPB5 146 aa16.83■□□□□ 0.28
SMARCD3-203ENST00000392811 hADV29S1A0JD25 119 aa16.82■□□□□ 0.28
SMARCD3-203ENST00000392811 DIRC1Q969H9 104 aa16.8■□□□□ 0.28
SMARCD3-203ENST00000392811 M0R378 163 aa16.79■□□□□ 0.28
SMARCD3-203ENST00000392811 CASC10Q5T4H9 136 aa16.79■□□□□ 0.28
SMARCD3-203ENST00000392811 LINC00643Q86TS7 51 aa16.79■□□□□ 0.28
SMARCD3-203ENST00000392811 ZNF73O43830 326 aaPredicted RBP16.78■□□□□ 0.28
SMARCD3-203ENST00000392811 MDFIQ99750 246 aa16.77■□□□□ 0.28
SMARCD3-203ENST00000392811 UPK3BQ9BT76 320 aa16.77■□□□□ 0.28
SMARCD3-203ENST00000392811 TRBV7-7A0A0K0K1E9 115 aa16.77■□□□□ 0.27
SMARCD3-203ENST00000392811 USP17L23D6RBM5 183 aa16.76■□□□□ 0.27
SMARCD3-203ENST00000392811 JMJD7-PLA2G4BH0Y9G9 81 aa16.76■□□□□ 0.27
SMARCD3-203ENST00000392811 RMI2Q96E14 147 aa16.74■□□□□ 0.27
SMARCD3-203ENST00000392811 COX7BP24311 80 aa16.72■□□□□ 0.27
SMARCD3-203ENST00000392811 DNAH1Q9P2D7 4330 aa16.72■□□□□ 0.27
SMARCD3-203ENST00000392811 NDUFV3P56181 108 aaKnown RBP16.71■□□□□ 0.27
SMARCD3-203ENST00000392811 ELOF1P60002 83 aaKnown RBP16.71■□□□□ 0.27
SMARCD3-203ENST00000392811 Q6ZQY7 126 aa16.71■□□□□ 0.27
SMARCD3-203ENST00000392811 ANAPC13Q9BS18 74 aa16.71■□□□□ 0.27
SMARCD3-203ENST00000392811 CCKP06307 115 aa16.7■□□□□ 0.26
SMARCD3-203ENST00000392811 TRBV7-6A0A0J9YX20 115 aa16.7■□□□□ 0.26
SMARCD3-203ENST00000392811 TLX1NBP0CAT3 122 aa16.69■□□□□ 0.26
SMARCD3-203ENST00000392811 LINC00846Q9NV44 126 aa16.69■□□□□ 0.26
SMARCD3-203ENST00000392811 IMUPQ9GZP8 106 aa16.67■□□□□ 0.26
SMARCD3-203ENST00000392811 SERTAD4-AS1Q5TG53 156 aa16.67■□□□□ 0.26
SMARCD3-203ENST00000392811 NHLRC4P0CG21 123 aaPredicted RBP16.65■□□□□ 0.26
SMARCD3-203ENST00000392811 NKAPP1Q8N9T2 125 aa16.64■□□□□ 0.25
SMARCD3-203ENST00000392811 COL7A1Q02388 2944 aa16.64■□□□□ 0.25
SMARCD3-203ENST00000392811 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.63■□□□□ 0.25
SMARCD3-203ENST00000392811 LAMTOR3Q9UHA4 124 aa16.63■□□□□ 0.25
SMARCD3-203ENST00000392811 STAB2Q8WWQ8 2551 aa16.63■□□□□ 0.25
SMARCD3-203ENST00000392811 DNAH9Q9NYC9 4486 aa16.63■□□□□ 0.25
SMARCD3-203ENST00000392811 LINC00528Q8N1L1 170 aa16.62■□□□□ 0.25
SMARCD3-203ENST00000392811 H3BQ85 93 aa16.61■□□□□ 0.25
SMARCD3-203ENST00000392811 C7orf33Q8WU49 177 aa16.61■□□□□ 0.25
SMARCD3-203ENST00000392811 RBM3P98179 157 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-203ENST00000392811 B9D2Q9BPU9 175 aa16.6■□□□□ 0.25
SMARCD3-203ENST00000392811 KRTAP1-5Q9BYS1 174 aa16.6■□□□□ 0.25
SMARCD3-203ENST00000392811 PLA2G2DQ9UNK4 145 aa16.6■□□□□ 0.25
SMARCD3-203ENST00000392811 KCNQ1DNQ9H478 68 aa16.58■□□□□ 0.24
SMARCD3-203ENST00000392811 APLNQ9ULZ1 77 aa16.58■□□□□ 0.24
SMARCD3-203ENST00000392811 FAM168BA1KXE4 195 aa16.57■□□□□ 0.24
SMARCD3-203ENST00000392811 Q6JHZ5 121 aa16.55■□□□□ 0.24
SMARCD3-203ENST00000392811 Q6ZQT0 140 aa16.55■□□□□ 0.24
SMARCD3-203ENST00000392811 LOC110117498A0A087WWA1 95 aa16.55■□□□□ 0.24
SMARCD3-203ENST00000392811 FAM236AA0A1B0GUQ0 79 aa16.54■□□□□ 0.24
SMARCD3-203ENST00000392811 FAM236BA0A1B0GV22 79 aa16.54■□□□□ 0.24
SMARCD3-203ENST00000392811 UBE2DNLQ8IWF7 75 aa16.54■□□□□ 0.24
SMARCD3-203ENST00000392811 IGLV5-37A0A075B6J1 123 aa16.53■□□□□ 0.24
SMARCD3-203ENST00000392811 IGKV3D-7A0A0C4DH55 119 aa16.52■□□□□ 0.24
SMARCD3-203ENST00000392811 GHRHP01286 108 aa16.52■□□□□ 0.24
SMARCD3-203ENST00000392811 KRTAP7-1Q8IUC3 87 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms